RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 TMEM30AQ9NV96 361 aa14.4□□□□□ -0.1
DDX41-210ENST00000509576 GTF3C4Q9UKN8 822 aa14.4□□□□□ -0.1
DDX41-210ENST00000509576 DSEQ9UL01 958 aa14.4□□□□□ -0.1
DDX41-210ENST00000509576 MAGED2Q9UNF1 606 aaPredicted RBP14.4□□□□□ -0.1
DDX41-210ENST00000509576 AGAP1Q9UPQ3 857 aa14.4□□□□□ -0.1
DDX41-210ENST00000509576 PCDHB5Q9Y5E4 795 aa14.4□□□□□ -0.1
DDX41-210ENST00000509576 WNT6Q9Y6F9 365 aa14.4□□□□□ -0.1
DDX41-210ENST00000509576 ADAMTS9Q9P2N4 1935 aa14.4□□□□□ -0.1
DDX41-210ENST00000509576 FRMD3A2A2Y4 597 aa14.39□□□□□ -0.11
DDX41-210ENST00000509576 C2orf78A6NCI8 922 aa14.39□□□□□ -0.11
DDX41-210ENST00000509576 GABRDO14764 452 aa14.39□□□□□ -0.11
DDX41-210ENST00000509576 EIF5BO60841 1220 aaKnown RBP14.39□□□□□ -0.11
DDX41-210ENST00000509576 PRPF40AO75400 957 aaKnown RBP14.39□□□□□ -0.11
DDX41-210ENST00000509576 SCP2P22307 547 aa14.39□□□□□ -0.11
DDX41-210ENST00000509576 PAX3P23760 479 aa14.39□□□□□ -0.11
DDX41-210ENST00000509576 HOXD13P35453 343 aa14.39□□□□□ -0.11
DDX41-210ENST00000509576 USP46P62068 366 aa14.39□□□□□ -0.11
DDX41-210ENST00000509576 TFAMQ00059 246 aaKnown RBP14.39□□□□□ -0.11
DDX41-210ENST00000509576 RESTQ13127 1097 aa14.39□□□□□ -0.11
DDX41-210ENST00000509576 SOWAHAQ2M3V2 549 aa14.39□□□□□ -0.11
DDX41-210ENST00000509576 SV2CQ496J9 727 aa14.39□□□□□ -0.11
DDX41-210ENST00000509576 INTS6LQ5JSJ4 861 aaKnown RBP14.39□□□□□ -0.11
DDX41-210ENST00000509576 L1TD1Q5T7N2 865 aaKnown RBP14.39□□□□□ -0.11
DDX41-210ENST00000509576 CEP68Q76N32 757 aa14.39□□□□□ -0.11
DDX41-210ENST00000509576 OR5B17Q8NGF7 314 aa14.39□□□□□ -0.11
DDX41-210ENST00000509576 KBTBD7Q8WVZ9 684 aa14.39□□□□□ -0.11
DDX41-210ENST00000509576 HPS3Q969F9 1004 aa14.39□□□□□ -0.11
DDX41-210ENST00000509576 MYRFLQ96LU7 910 aa14.39□□□□□ -0.11
DDX41-210ENST00000509576 MTMR12Q9C0I1 747 aa14.39□□□□□ -0.11
DDX41-210ENST00000509576 DUSP15Q9H1R2 295 aaPredicted RBP14.39□□□□□ -0.11
DDX41-210ENST00000509576 LINC00597Q9H2U6 94 aa14.39□□□□□ -0.11
DDX41-210ENST00000509576 PDE11AQ9HCR9 933 aa14.39□□□□□ -0.11
DDX41-210ENST00000509576 DDX43Q9NXZ2 648 aaKnown RBP14.39□□□□□ -0.11
DDX41-210ENST00000509576 RPP40O75818 363 aaKnown RBP14.38□□□□□ -0.11
DDX41-210ENST00000509576 ZNF806P0C7X5 589 aa14.38□□□□□ -0.11
DDX41-210ENST00000509576 HNRNPLP14866 589 aaKnown RBP eCLIP14.38□□□□□ -0.11
DDX41-210ENST00000509576 LMO2P25791 158 aa14.38□□□□□ -0.11
DDX41-210ENST00000509576 PMLP29590 882 aa14.38□□□□□ -0.11
DDX41-210ENST00000509576 LIMK1P53667 647 aa14.38□□□□□ -0.11
DDX41-210ENST00000509576 POU5F1Q01860 360 aaKnown RBP14.38□□□□□ -0.11
DDX41-210ENST00000509576 MTF1Q14872 753 aa14.38□□□□□ -0.11
DDX41-210ENST00000509576 EML3Q32P44 896 aa14.38□□□□□ -0.11
DDX41-210ENST00000509576 PLK5Q496M5 336 aa14.38□□□□□ -0.11
DDX41-210ENST00000509576 N4BP2L1Q5TBK1 243 aaPredicted RBP14.38□□□□□ -0.11
DDX41-210ENST00000509576 SLFN12LQ6IEE8 588 aa14.38□□□□□ -0.11
DDX41-210ENST00000509576 METTL23Q86XA0 190 aa14.38□□□□□ -0.11
DDX41-210ENST00000509576 THEM5Q8N1Q8 247 aa14.38□□□□□ -0.11
DDX41-210ENST00000509576 HVCN1Q96D96 273 aa14.38□□□□□ -0.11
DDX41-210ENST00000509576 TRMT2BQ96GJ1 504 aaKnown RBP14.38□□□□□ -0.11
DDX41-210ENST00000509576 PCIF1Q9H4Z3 704 aa14.38□□□□□ -0.11
DDX41-210ENST00000509576 ECT2Q9H8V3 914 aa14.38□□□□□ -0.11
DDX41-210ENST00000509576 CRTAC1Q9NQ79 661 aa14.38□□□□□ -0.11
DDX41-210ENST00000509576 SMC3Q9UQE7 1217 aa14.38□□□□□ -0.11
DDX41-210ENST00000509576 KIF3AQ9Y496 699 aa14.38□□□□□ -0.11
DDX41-210ENST00000509576 CCDC163A0A0D9SF12 145 aa14.37□□□□□ -0.11
DDX41-210ENST00000509576 IL18RAPO95256 599 aa14.37□□□□□ -0.11
DDX41-210ENST00000509576 AVPR1AP37288 418 aa14.37□□□□□ -0.11
DDX41-210ENST00000509576 OPRD1P41143 372 aa14.37□□□□□ -0.11
DDX41-210ENST00000509576 CACNA2D1P54289 1103 aa14.37□□□□□ -0.11
DDX41-210ENST00000509576 PSMC1P62191 440 aaKnown RBP14.37□□□□□ -0.11
DDX41-210ENST00000509576 SMARCB1Q12824 385 aa14.37□□□□□ -0.11
DDX41-210ENST00000509576 BFSP1Q12934 665 aa14.37□□□□□ -0.11
DDX41-210ENST00000509576 ZNF268Q14587 947 aaPredicted RBP14.37□□□□□ -0.11
DDX41-210ENST00000509576 FAM171BQ6P995 826 aa14.37□□□□□ -0.11
DDX41-210ENST00000509576 BRAPQ7Z569 592 aa14.37□□□□□ -0.11
DDX41-210ENST00000509576 DCP1BQ8IZD4 617 aaKnown RBP14.37□□□□□ -0.11
DDX41-210ENST00000509576 ARL14EPQ8N8R7 260 aaPredicted RBP14.37□□□□□ -0.11
DDX41-210ENST00000509576 RPLP0P6Q8NHW5 317 aa14.37□□□□□ -0.11
DDX41-210ENST00000509576 ZC3H10Q96K80 434 aaKnown RBP14.37□□□□□ -0.11
DDX41-210ENST00000509576 GCNAQ96QF7 691 aa14.37□□□□□ -0.11
DDX41-210ENST00000509576 ACBD6Q9BR61 282 aa14.37□□□□□ -0.11
DDX41-210ENST00000509576 GZF1Q9H116 711 aaPredicted RBP14.37□□□□□ -0.11
DDX41-210ENST00000509576 MRPL44Q9H9J2 332 aaKnown RBP14.37□□□□□ -0.11
DDX41-210ENST00000509576 GDAP2Q9NXN4 497 aa14.37□□□□□ -0.11
DDX41-210ENST00000509576 IGF2RP11717 2491 aa14.36□□□□□ -0.11
DDX41-210ENST00000509576 PRPF6O94906 941 aaKnown RBP14.36□□□□□ -0.11
DDX41-210ENST00000509576 CSH1P0DML2 217 aa14.36□□□□□ -0.11
DDX41-210ENST00000509576 CSH2P0DML3 217 aa14.36□□□□□ -0.11
DDX41-210ENST00000509576 DDX6P26196 483 aaKnown RBP eCLIP14.36□□□□□ -0.11
DDX41-210ENST00000509576 CUL4AQ13619 759 aa14.36□□□□□ -0.11
DDX41-210ENST00000509576 STPG1Q5TH74 334 aa14.36□□□□□ -0.11
DDX41-210ENST00000509576 CACNA2D4Q7Z3S7 1137 aa14.36□□□□□ -0.11
DDX41-210ENST00000509576 NT5DC4Q86YG4 428 aa14.36□□□□□ -0.11
DDX41-210ENST00000509576 CSGALNACT2Q8N6G5 542 aa14.36□□□□□ -0.11
DDX41-210ENST00000509576 LRRC52Q8N7C0 313 aa14.36□□□□□ -0.11
DDX41-210ENST00000509576 KRI1Q8N9T8 703 aaKnown RBP14.36□□□□□ -0.11
DDX41-210ENST00000509576 OSCP1Q8WVF1 389 aa14.36□□□□□ -0.11
DDX41-210ENST00000509576 ZNF560Q96MR9 790 aa14.36□□□□□ -0.11
DDX41-210ENST00000509576 P2RY13Q9BPV8 354 aa14.36□□□□□ -0.11
DDX41-210ENST00000509576 PANK2Q9BZ23 570 aa14.36□□□□□ -0.11
DDX41-210ENST00000509576 KIF9Q9HAQ2 790 aa14.36□□□□□ -0.11
DDX41-210ENST00000509576 TRPC7Q9HCX4 862 aa14.36□□□□□ -0.11
DDX41-210ENST00000509576 ABCB6Q9NP58 842 aa14.36□□□□□ -0.11
DDX41-210ENST00000509576 OLFML3Q9NRN5 406 aa14.36□□□□□ -0.11
DDX41-210ENST00000509576 THG1LQ9NWX6 298 aaKnown RBP14.36□□□□□ -0.11
DDX41-210ENST00000509576 RBAKQ9NYW8 714 aaPredicted RBP14.36□□□□□ -0.11
DDX41-210ENST00000509576 STK17AQ9UEE5 414 aa14.36□□□□□ -0.11
DDX41-210ENST00000509576 RALYQ9UKM9 306 aaKnown RBP14.36□□□□□ -0.11
DDX41-210ENST00000509576 INVSQ9Y283 1065 aa14.36□□□□□ -0.11
DDX41-210ENST00000509576 SRPRBQ9Y5M8 271 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms