RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 RAP1GAPP47736 663 aa18.84■□□□□ 0.61
CCHCR1-228ENST00000509552 CTCFP49711 727 aaPredicted RBP18.84■□□□□ 0.61
CCHCR1-228ENST00000509552 ARL4CP56559 192 aa18.84■□□□□ 0.61
CCHCR1-228ENST00000509552 WDR4P57081 412 aaKnown RBP18.84■□□□□ 0.61
CCHCR1-228ENST00000509552 BNIP1Q12981 228 aa18.84■□□□□ 0.61
CCHCR1-228ENST00000509552 RASA2Q15283 850 aa18.84■□□□□ 0.61
CCHCR1-228ENST00000509552 PKN2Q16513 984 aaKnown RBP18.84■□□□□ 0.61
CCHCR1-228ENST00000509552 KCNT1Q5JUK3 1230 aa18.84■□□□□ 0.61
CCHCR1-228ENST00000509552 RNF43Q68DV7 783 aa18.84■□□□□ 0.61
CCHCR1-228ENST00000509552 DHX37Q8IY37 1157 aaKnown RBP18.84■□□□□ 0.61
CCHCR1-228ENST00000509552 FAXDC2Q96IV6 333 aa18.84■□□□□ 0.61
CCHCR1-228ENST00000509552 SPATA33Q96N06 139 aa18.84■□□□□ 0.61
CCHCR1-228ENST00000509552 PHACTR1Q9C0D0 580 aa18.84■□□□□ 0.61
CCHCR1-228ENST00000509552 GOLGA8MH3BSY2 632 aa18.84■□□□□ 0.61
CCHCR1-228ENST00000509552 B4GALT5O43286 388 aa18.84■□□□□ 0.61
CCHCR1-228ENST00000509552 ATP6V1G2O95670 118 aa18.84■□□□□ 0.61
CCHCR1-228ENST00000509552 FOXN2P32314 431 aa18.84■□□□□ 0.61
CCHCR1-228ENST00000509552 HIRAP54198 1017 aaPredicted RBP18.84■□□□□ 0.61
CCHCR1-228ENST00000509552 NCALDP61601 193 aa18.84■□□□□ 0.61
CCHCR1-228ENST00000509552 MYO1EQ12965 1108 aa18.84■□□□□ 0.61
CCHCR1-228ENST00000509552 ACVR2BQ13705 512 aa18.84■□□□□ 0.61
CCHCR1-228ENST00000509552 ZNF268Q14587 947 aaPredicted RBP18.84■□□□□ 0.61
CCHCR1-228ENST00000509552 PNMA8AQ86V59 439 aaPredicted RBP18.84■□□□□ 0.61
CCHCR1-228ENST00000509552 CEP120Q8N960 986 aa18.84■□□□□ 0.61
CCHCR1-228ENST00000509552 PYROXD1Q8WU10 500 aa18.84■□□□□ 0.61
CCHCR1-228ENST00000509552 ZNF668Q96K58 619 aaPredicted RBP18.84■□□□□ 0.61
CCHCR1-228ENST00000509552 BCO2Q9BYV7 579 aa18.84■□□□□ 0.61
CCHCR1-228ENST00000509552 METTL5Q9NRN9 209 aaKnown RBP18.84■□□□□ 0.61
CCHCR1-228ENST00000509552 SAE1Q9UBE0 346 aaPredicted RBP18.84■□□□□ 0.61
CCHCR1-228ENST00000509552 CYTH4Q9UIA0 394 aa18.84■□□□□ 0.61
CCHCR1-228ENST00000509552 FARP1Q9Y4F1 1045 aaPredicted RBP18.84■□□□□ 0.61
CCHCR1-228ENST00000509552 CXCL8P10145 99 aa18.83■□□□□ 0.61
CCHCR1-228ENST00000509552 NQO1P15559 274 aaKnown RBP18.83■□□□□ 0.61
CCHCR1-228ENST00000509552 IL1R2P27930 398 aa18.83■□□□□ 0.61
CCHCR1-228ENST00000509552 SLC26A2P50443 739 aa18.83■□□□□ 0.61
CCHCR1-228ENST00000509552 RAD23BP54727 409 aa18.83■□□□□ 0.61
CCHCR1-228ENST00000509552 EEF1DP3Q658K8 133 aa18.83■□□□□ 0.61
CCHCR1-228ENST00000509552 CGB2Q6NT52 195 aa18.83■□□□□ 0.61
CCHCR1-228ENST00000509552 CDR2LQ86X02 465 aaPredicted RBP18.83■□□□□ 0.61
CCHCR1-228ENST00000509552 KCTD6Q8NC69 237 aa18.83■□□□□ 0.61
CCHCR1-228ENST00000509552 CDT1Q9H211 546 aa18.83■□□□□ 0.61
CCHCR1-228ENST00000509552 BAIAP2L1Q9UHR4 511 aa18.83■□□□□ 0.61
CCHCR1-228ENST00000509552 TNFSF13BQ9Y275 285 aa18.83■□□□□ 0.61
CCHCR1-228ENST00000509552 A0A0G2JMZ2 1700 aa18.83■□□□□ 0.6
CCHCR1-228ENST00000509552 MAGEB2O15479 319 aa18.83■□□□□ 0.6
CCHCR1-228ENST00000509552 RNF8O76064 485 aa18.83■□□□□ 0.6
CCHCR1-228ENST00000509552 SLC25A27O95847 323 aa18.83■□□□□ 0.6
CCHCR1-228ENST00000509552 GSCP56915 257 aaPredicted RBP18.83■□□□□ 0.6
CCHCR1-228ENST00000509552 GEMIN4P57678 1058 aaKnown RBP18.83■□□□□ 0.6
CCHCR1-228ENST00000509552 EFCAB12Q6NXP0 572 aa18.83■□□□□ 0.6
CCHCR1-228ENST00000509552 FAM47EQ6ZV65 393 aa18.83■□□□□ 0.6
CCHCR1-228ENST00000509552 FAM228AQ86W67 206 aa18.83■□□□□ 0.6
CCHCR1-228ENST00000509552 CEP57Q86XR8 500 aa18.83■□□□□ 0.6
CCHCR1-228ENST00000509552 XYLT1Q86Y38 959 aa18.83■□□□□ 0.6
CCHCR1-228ENST00000509552 ANKMY2Q8IV38 441 aa18.83■□□□□ 0.6
CCHCR1-228ENST00000509552 FITM2Q8N6M3 262 aa18.83■□□□□ 0.6
CCHCR1-228ENST00000509552 ARFGAP1Q8N6T3 406 aa18.83■□□□□ 0.6
CCHCR1-228ENST00000509552 ATP11CQ8NB49 1132 aa18.83■□□□□ 0.6
CCHCR1-228ENST00000509552 DENND1AQ8TEH3 1009 aa18.83■□□□□ 0.6
CCHCR1-228ENST00000509552 CNKSR2Q8WXI2 1034 aa18.83■□□□□ 0.6
CCHCR1-228ENST00000509552 MRRFQ96E11 262 aaKnown RBP18.83■□□□□ 0.6
CCHCR1-228ENST00000509552 CPXM1Q96SM3 734 aa18.83■□□□□ 0.6
CCHCR1-228ENST00000509552 SMARCAD1Q9H4L7 1026 aa18.83■□□□□ 0.6
CCHCR1-228ENST00000509552 TJP2Q9UDY2 1190 aa18.83■□□□□ 0.6
CCHCR1-228ENST00000509552 STARD13Q9Y3M8 1113 aa18.83■□□□□ 0.6
CCHCR1-228ENST00000509552 CA4P22748 312 aa18.82■□□□□ 0.6
CCHCR1-228ENST00000509552 CDH8P55286 799 aa18.82■□□□□ 0.6
CCHCR1-228ENST00000509552 RIPK1Q13546 671 aa18.82■□□□□ 0.6
CCHCR1-228ENST00000509552 TAZQ16635 292 aa18.82■□□□□ 0.6
CCHCR1-228ENST00000509552 RFX6Q8HWS3 928 aa18.82■□□□□ 0.6
CCHCR1-228ENST00000509552 C4orf33Q8N1A6 199 aa18.82■□□□□ 0.6
CCHCR1-228ENST00000509552 EMC1Q8N766 993 aa18.82■□□□□ 0.6
CCHCR1-228ENST00000509552 TRAPPC12Q8WVT3 735 aa18.82■□□□□ 0.6
CCHCR1-228ENST00000509552 KLHL29Q96CT2 875 aa18.82■□□□□ 0.6
CCHCR1-228ENST00000509552 NOD2Q9HC29 1040 aa18.82■□□□□ 0.6
CCHCR1-228ENST00000509552 FETUBQ9UGM5 382 aa18.82■□□□□ 0.6
CCHCR1-228ENST00000509552 SMAPO00193 183 aa18.82■□□□□ 0.6
CCHCR1-228ENST00000509552 HBP1O60381 514 aa18.82■□□□□ 0.6
CCHCR1-228ENST00000509552 PGK2P07205 417 aa18.82■□□□□ 0.6
CCHCR1-228ENST00000509552 GJB1P08034 283 aa18.82■□□□□ 0.6
CCHCR1-228ENST00000509552 GBP2P32456 591 aaPredicted RBP18.82■□□□□ 0.6
CCHCR1-228ENST00000509552 MBTD1Q05BQ5 628 aa18.82■□□□□ 0.6
CCHCR1-228ENST00000509552 PTPN11Q06124 597 aaPredicted RBP18.82■□□□□ 0.6
CCHCR1-228ENST00000509552 ACAP1Q15027 740 aa18.82■□□□□ 0.6
CCHCR1-228ENST00000509552 EFHC2Q5JST6 749 aa18.82■□□□□ 0.6
CCHCR1-228ENST00000509552 CPT1BQ92523 772 aa18.82■□□□□ 0.6
CCHCR1-228ENST00000509552 RMDN2Q96LZ7 410 aa18.82■□□□□ 0.6
CCHCR1-228ENST00000509552 KIF9Q9HAQ2 790 aa18.82■□□□□ 0.6
CCHCR1-228ENST00000509552 PCSK1NQ9UHG2 260 aa18.82■□□□□ 0.6
CCHCR1-228ENST00000509552 SIX4Q9UIU6 781 aa18.82■□□□□ 0.6
CCHCR1-228ENST00000509552 ERBB2P04626 1255 aa18.81■□□□□ 0.6
CCHCR1-228ENST00000509552 EZRP15311 586 aaKnown RBP18.81■□□□□ 0.6
CCHCR1-228ENST00000509552 GDF10P55107 478 aa18.81■□□□□ 0.6
CCHCR1-228ENST00000509552 CCDC15Q0P6D6 951 aa18.81■□□□□ 0.6
CCHCR1-228ENST00000509552 PREPLQ4J6C6 727 aaPredicted RBP18.81■□□□□ 0.6
CCHCR1-228ENST00000509552 RGS9BPQ6ZS82 235 aa18.81■□□□□ 0.6
CCHCR1-228ENST00000509552 KIAA0319LQ8IZA0 1049 aa18.81■□□□□ 0.6
CCHCR1-228ENST00000509552 NAT8LQ8N9F0 302 aa18.81■□□□□ 0.6
CCHCR1-228ENST00000509552 C1orf127Q8N9H9 656 aa18.81■□□□□ 0.6
CCHCR1-228ENST00000509552 SLC4A11Q8NBS3 891 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms