RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 TRAK2O60296 914 aa17.23■□□□□ 0.35
CXCL1-202ENST00000509101 KRT18P05783 430 aaKnown RBP17.23■□□□□ 0.35
CXCL1-202ENST00000509101 SCP2P22307 547 aa17.23■□□□□ 0.35
CXCL1-202ENST00000509101 IFNAR2P48551 515 aa17.23■□□□□ 0.35
CXCL1-202ENST00000509101 USP4Q13107 963 aa17.23■□□□□ 0.35
CXCL1-202ENST00000509101 ZNF268Q14587 947 aaPredicted RBP17.23■□□□□ 0.35
CXCL1-202ENST00000509101 ZNF77Q15935 545 aa17.23■□□□□ 0.35
CXCL1-202ENST00000509101 ZNF560Q96MR9 790 aa17.23■□□□□ 0.35
CXCL1-202ENST00000509101 FIZ1Q96SL8 496 aa17.23■□□□□ 0.35
CXCL1-202ENST00000509101 TPSD1Q9BZJ3 242 aa17.23■□□□□ 0.35
CXCL1-202ENST00000509101 DUS2Q9NX74 493 aaKnown RBP17.23■□□□□ 0.35
CXCL1-202ENST00000509101 KPNA7A9QM74 516 aa17.22■□□□□ 0.35
CXCL1-202ENST00000509101 TBCAO75347 108 aaKnown RBP17.22■□□□□ 0.35
CXCL1-202ENST00000509101 CKMP06732 381 aa17.22■□□□□ 0.35
CXCL1-202ENST00000509101 SPINK2P20155 84 aa17.22■□□□□ 0.35
CXCL1-202ENST00000509101 FAM160A1Q05DH4 1040 aa17.22■□□□□ 0.35
CXCL1-202ENST00000509101 MCM6Q14566 821 aa17.22■□□□□ 0.35
CXCL1-202ENST00000509101 DDR2Q16832 855 aa17.22■□□□□ 0.35
CXCL1-202ENST00000509101 ZC2HC1CQ53FD0 456 aaPredicted RBP17.22■□□□□ 0.35
CXCL1-202ENST00000509101 DAB2IPQ5VWQ8 1189 aa17.22■□□□□ 0.35
CXCL1-202ENST00000509101 OSCP1Q8WVF1 389 aa17.22■□□□□ 0.35
CXCL1-202ENST00000509101 ATP2A3Q93084 1043 aa17.22■□□□□ 0.35
CXCL1-202ENST00000509101 CALML4Q96GE6 196 aa17.22■□□□□ 0.35
CXCL1-202ENST00000509101 SLC22A12Q96S37 553 aa17.22■□□□□ 0.35
CXCL1-202ENST00000509101 IKZF4Q9H2S9 585 aa17.22■□□□□ 0.35
CXCL1-202ENST00000509101 BLOC1S4Q9NUP1 217 aa17.22■□□□□ 0.35
CXCL1-202ENST00000509101 UXTQ9UBK9 157 aaPredicted RBP17.22■□□□□ 0.35
CXCL1-202ENST00000509101 EBF1Q9UH73 591 aa17.22■□□□□ 0.35
CXCL1-202ENST00000509101 AGO2Q9UKV8 859 aaKnown RBP17.22■□□□□ 0.35
CXCL1-202ENST00000509101 ZMIZ1Q9ULJ6 1067 aa17.22■□□□□ 0.35
CXCL1-202ENST00000509101 SOBPA7XYQ1 873 aa17.21■□□□□ 0.35
CXCL1-202ENST00000509101 TULP1O00294 542 aaPredicted RBP17.21■□□□□ 0.35
CXCL1-202ENST00000509101 ACAT1P24752 427 aaKnown RBP17.21■□□□□ 0.35
CXCL1-202ENST00000509101 CYP2F1P24903 491 aa17.21■□□□□ 0.35
CXCL1-202ENST00000509101 GTF2BQ00403 316 aa17.21■□□□□ 0.35
CXCL1-202ENST00000509101 NFE2Q16621 373 aaPredicted RBP17.21■□□□□ 0.35
CXCL1-202ENST00000509101 SH3PXD2AQ5TCZ1 1133 aa17.21■□□□□ 0.35
CXCL1-202ENST00000509101 ERICH6BQ5W0A0 696 aa17.21■□□□□ 0.35
CXCL1-202ENST00000509101 ARL6IP4Q66PJ3 421 aaKnown RBP17.21■□□□□ 0.35
CXCL1-202ENST00000509101 PMS2CLQ68D20 193 aa17.21■□□□□ 0.35
CXCL1-202ENST00000509101 TSTD1Q8NFU3 115 aa17.21■□□□□ 0.35
CXCL1-202ENST00000509101 LEO1Q8WVC0 666 aaPredicted RBP17.21■□□□□ 0.35
CXCL1-202ENST00000509101 ASCC3Q8N3C0 2202 aaKnown RBP17.21■□□□□ 0.35
CXCL1-202ENST00000509101 TRAV19A0A0A6YYK7 116 aa17.2■□□□□ 0.34
CXCL1-202ENST00000509101 EIF5BO60841 1220 aaKnown RBP17.2■□□□□ 0.34
CXCL1-202ENST00000509101 NOL4O94818 638 aa17.2■□□□□ 0.34
CXCL1-202ENST00000509101 USP17L7P0C7H9 530 aa17.2■□□□□ 0.34
CXCL1-202ENST00000509101 PLCG1P19174 1290 aa17.2■□□□□ 0.34
CXCL1-202ENST00000509101 SEC13P55735 322 aa17.2■□□□□ 0.34
CXCL1-202ENST00000509101 RPL10AP62906 217 aaKnown RBP17.2■□□□□ 0.34
CXCL1-202ENST00000509101 CCDC142Q17RM4 750 aa17.2■□□□□ 0.34
CXCL1-202ENST00000509101 EML3Q32P44 896 aa17.2■□□□□ 0.34
CXCL1-202ENST00000509101 CRELD2Q6UXH1 353 aaPredicted RBP17.2■□□□□ 0.34
CXCL1-202ENST00000509101 CYP2U1Q7Z449 544 aa17.2■□□□□ 0.34
CXCL1-202ENST00000509101 PDCL2Q8N4E4 241 aa17.2■□□□□ 0.34
CXCL1-202ENST00000509101 RASSF8Q8NHQ8 419 aa17.2■□□□□ 0.34
CXCL1-202ENST00000509101 TRMT2BQ96GJ1 504 aaKnown RBP17.2■□□□□ 0.34
CXCL1-202ENST00000509101 CYP2S1Q96SQ9 504 aa17.2■□□□□ 0.34
CXCL1-202ENST00000509101 TMEM206Q9H813 350 aa17.2■□□□□ 0.34
CXCL1-202ENST00000509101 TMEM9BQ9NQ34 198 aa17.2■□□□□ 0.34
CXCL1-202ENST00000509101 DDX43Q9NXZ2 648 aaKnown RBP17.2■□□□□ 0.34
CXCL1-202ENST00000509101 L1RE1Q9UN81 338 aa17.2■□□□□ 0.34
CXCL1-202ENST00000509101 PLXND1Q9Y4D7 1925 aa17.19■□□□□ 0.34
CXCL1-202ENST00000509101 PKD1L2Q7Z442 2459 aa17.19■□□□□ 0.34
CXCL1-202ENST00000509101 PATE3B3GLJ2 98 aa17.19■□□□□ 0.34
CXCL1-202ENST00000509101 KHNYNO15037 678 aaKnown RBP17.19■□□□□ 0.34
CXCL1-202ENST00000509101 TOP3BO95985 862 aaKnown RBP17.19■□□□□ 0.34
CXCL1-202ENST00000509101 BCKDHBP21953 392 aa17.19■□□□□ 0.34
CXCL1-202ENST00000509101 POLR2BP30876 1174 aaKnown RBP17.19■□□□□ 0.34
CXCL1-202ENST00000509101 ABCD1P33897 745 aa17.19■□□□□ 0.34
CXCL1-202ENST00000509101 UBA7P41226 1012 aa17.19■□□□□ 0.34
CXCL1-202ENST00000509101 INTS6LQ5JSJ4 861 aaKnown RBP17.19■□□□□ 0.34
CXCL1-202ENST00000509101 SLFN12LQ6IEE8 588 aa17.19■□□□□ 0.34
CXCL1-202ENST00000509101 ANO7Q6IWH7 933 aa17.19■□□□□ 0.34
CXCL1-202ENST00000509101 ARL14EPQ8N8R7 260 aaPredicted RBP17.19■□□□□ 0.34
CXCL1-202ENST00000509101 SH3RF2Q8TEC5 729 aa17.19■□□□□ 0.34
CXCL1-202ENST00000509101 POMGNT1Q8WZA1 660 aa17.19■□□□□ 0.34
CXCL1-202ENST00000509101 RAD54LQ92698 747 aa17.19■□□□□ 0.34
CXCL1-202ENST00000509101 AK8Q96MA6 479 aa17.19■□□□□ 0.34
CXCL1-202ENST00000509101 ADAM33Q9BZ11 813 aa17.19■□□□□ 0.34
CXCL1-202ENST00000509101 KIF3AQ9Y496 699 aa17.19■□□□□ 0.34
CXCL1-202ENST00000509101 STYXL1Q9Y6J8 313 aa17.19■□□□□ 0.34
CXCL1-202ENST00000509101 CEP192Q8TEP8 1941 aa17.19■□□□□ 0.34
CXCL1-202ENST00000509101 PI4KAP42356 2102 aa17.18■□□□□ 0.34
CXCL1-202ENST00000509101 ADAMTS9Q9P2N4 1935 aa17.18■□□□□ 0.34
CXCL1-202ENST00000509101 MYOFQ9NZM1 2061 aa17.18■□□□□ 0.34
CXCL1-202ENST00000509101 C2orf78A6NCI8 922 aa17.18■□□□□ 0.34
CXCL1-202ENST00000509101 ANTXRLA6NF34 631 aa17.18■□□□□ 0.34
CXCL1-202ENST00000509101 SLC26A4O43511 780 aa17.18■□□□□ 0.34
CXCL1-202ENST00000509101 IL18RAPO95256 599 aa17.18■□□□□ 0.34
CXCL1-202ENST00000509101 ITGB3P05106 788 aa17.18■□□□□ 0.34
CXCL1-202ENST00000509101 PNPLA4P41247 253 aa17.18■□□□□ 0.34
CXCL1-202ENST00000509101 WNT7BP56706 349 aa17.18■□□□□ 0.34
CXCL1-202ENST00000509101 TFAMQ00059 246 aaKnown RBP17.18■□□□□ 0.34
CXCL1-202ENST00000509101 MYL7Q01449 175 aa17.18■□□□□ 0.34
CXCL1-202ENST00000509101 USP39Q53GS9 565 aaKnown RBP17.18■□□□□ 0.34
CXCL1-202ENST00000509101 C2orf27AQ580R0 203 aa17.18■□□□□ 0.34
CXCL1-202ENST00000509101 C11orf74Q86VG3 221 aa17.18■□□□□ 0.34
CXCL1-202ENST00000509101 TTC30AQ86WT1 665 aa17.18■□□□□ 0.34
CXCL1-202ENST00000509101 SCN4BQ8IWT1 228 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms