RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 TUSC2O75896 110 aa6.63□□□□□ -1.35
TOPBP1-206ENST00000508524 SCGB1D2O95969 90 aa6.63□□□□□ -1.35
TOPBP1-206ENST00000508524 LIPAP38571 399 aa6.63□□□□□ -1.35
TOPBP1-206ENST00000508524 NFE2Q16621 373 aaPredicted RBP6.63□□□□□ -1.35
TOPBP1-206ENST00000508524 ANO6Q4KMQ2 910 aa6.63□□□□□ -1.35
TOPBP1-206ENST00000508524 CXorf57Q6NSI4 855 aaKnown RBP6.63□□□□□ -1.35
TOPBP1-206ENST00000508524 KBTBD7Q8WVZ9 684 aa6.63□□□□□ -1.35
TOPBP1-206ENST00000508524 ATG4AQ8WYN0 398 aa6.63□□□□□ -1.35
TOPBP1-206ENST00000508524 MOGAT1Q96PD6 335 aa6.63□□□□□ -1.35
TOPBP1-206ENST00000508524 B3GNT5Q9BYG0 378 aa6.63□□□□□ -1.35
TOPBP1-206ENST00000508524 ATP6V0A4Q9HBG4 840 aa6.63□□□□□ -1.35
TOPBP1-206ENST00000508524 ARHGEF3Q9NR81 526 aa6.63□□□□□ -1.35
TOPBP1-206ENST00000508524 TMX2Q9Y320 296 aa6.63□□□□□ -1.35
TOPBP1-206ENST00000508524 WNT6Q9Y6F9 365 aa6.63□□□□□ -1.35
TOPBP1-206ENST00000508524 UNC13AQ9UPW8 1703 aa6.62□□□□□ -1.35
TOPBP1-206ENST00000508524 CECR2Q9BXF3 1484 aa6.62□□□□□ -1.35
TOPBP1-206ENST00000508524 AOX1Q06278 1338 aa6.62□□□□□ -1.35
TOPBP1-206ENST00000508524 A0A087WWL8 130 aa6.62□□□□□ -1.35
TOPBP1-206ENST00000508524 TLR5O60602 858 aa6.62□□□□□ -1.35
TOPBP1-206ENST00000508524 ERBB2P04626 1255 aa6.62□□□□□ -1.35
TOPBP1-206ENST00000508524 THP07101 528 aa6.62□□□□□ -1.35
TOPBP1-206ENST00000508524 IL6RP08887 468 aaPredicted RBP6.62□□□□□ -1.35
TOPBP1-206ENST00000508524 CLCN2P51788 898 aa6.62□□□□□ -1.35
TOPBP1-206ENST00000508524 FAM153CQ494X1 144 aa6.62□□□□□ -1.35
TOPBP1-206ENST00000508524 FAM102BQ5T8I3 360 aa6.62□□□□□ -1.35
TOPBP1-206ENST00000508524 RGS7BPQ6MZT1 257 aaPredicted RBP6.62□□□□□ -1.35
TOPBP1-206ENST00000508524 NPNTQ6UXI9 565 aa6.62□□□□□ -1.35
TOPBP1-206ENST00000508524 DPH1Q9BZG8 443 aa6.62□□□□□ -1.35
TOPBP1-206ENST00000508524 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.62□□□□□ -1.35
TOPBP1-206ENST00000508524 NOB1Q9ULX3 412 aaKnown RBP6.62□□□□□ -1.35
TOPBP1-206ENST00000508524 SHROOM4Q9ULL8 1493 aa6.61□□□□□ -1.35
TOPBP1-206ENST00000508524 A0A1W2PPL8 197 aa6.61□□□□□ -1.35
TOPBP1-206ENST00000508524 CGB1A6NKQ9 187 aa6.61□□□□□ -1.35
TOPBP1-206ENST00000508524 ERC2O15083 957 aa6.61□□□□□ -1.35
TOPBP1-206ENST00000508524 SLC16A3O15427 465 aaKnown RBP6.61□□□□□ -1.35
TOPBP1-206ENST00000508524 WNT3P56703 355 aa6.61□□□□□ -1.35
TOPBP1-206ENST00000508524 FOXF2Q12947 444 aa6.61□□□□□ -1.35
TOPBP1-206ENST00000508524 TREML2Q5T2D2 321 aa6.61□□□□□ -1.35
TOPBP1-206ENST00000508524 FCRLBQ6BAA4 426 aa6.61□□□□□ -1.35
TOPBP1-206ENST00000508524 SWSAP1Q6NVH7 229 aa6.61□□□□□ -1.35
TOPBP1-206ENST00000508524 ZNF280BQ86YH2 543 aa6.61□□□□□ -1.35
TOPBP1-206ENST00000508524 DNAJC5GQ8N7S2 189 aa6.61□□□□□ -1.35
TOPBP1-206ENST00000508524 HASPINQ8TF76 798 aa6.61□□□□□ -1.35
TOPBP1-206ENST00000508524 MESP1Q9BRJ9 268 aa6.61□□□□□ -1.35
TOPBP1-206ENST00000508524 SERGEFQ9UGK8 458 aa6.61□□□□□ -1.35
TOPBP1-206ENST00000508524 NDRG4Q9ULP0 352 aaKnown RBP6.61□□□□□ -1.35
TOPBP1-206ENST00000508524 SHOC2Q9UQ13 582 aa6.61□□□□□ -1.35
TOPBP1-206ENST00000508524 TNFRSF18Q9Y5U5 241 aa6.61□□□□□ -1.35
TOPBP1-206ENST00000508524 H0YIZ8 118 aa6.6□□□□□ -1.35
TOPBP1-206ENST00000508524 hCG_1984214I3L0E3 225 aa6.6□□□□□ -1.35
TOPBP1-206ENST00000508524 CTNND1O60716 968 aaKnown RBP6.6□□□□□ -1.35
TOPBP1-206ENST00000508524 S100BP04271 92 aaPredicted RBP6.6□□□□□ -1.35
TOPBP1-206ENST00000508524 HNRNPCP07910 306 aaKnown RBP eCLIP6.6□□□□□ -1.35
TOPBP1-206ENST00000508524 KITP10721 976 aa6.6□□□□□ -1.35
TOPBP1-206ENST00000508524 GPSM2P81274 684 aa6.6□□□□□ -1.35
TOPBP1-206ENST00000508524 ZIK1Q3SY52 487 aaPredicted RBP6.6□□□□□ -1.35
TOPBP1-206ENST00000508524 ZKSCAN2Q63HK3 967 aa6.6□□□□□ -1.35
TOPBP1-206ENST00000508524 ZNF783Q6ZMS7 281 aa6.6□□□□□ -1.35
TOPBP1-206ENST00000508524 SRRM1Q8IYB3 904 aaKnown RBP6.6□□□□□ -1.35
TOPBP1-206ENST00000508524 CHPFQ8IZ52 775 aa6.6□□□□□ -1.35
TOPBP1-206ENST00000508524 SLC15A4Q8N697 577 aa6.6□□□□□ -1.35
TOPBP1-206ENST00000508524 IL31RAQ8NI17 732 aa6.6□□□□□ -1.35
TOPBP1-206ENST00000508524 DPF1Q92782 380 aa6.6□□□□□ -1.35
TOPBP1-206ENST00000508524 TMEM60Q9H2L4 133 aa6.6□□□□□ -1.35
TOPBP1-206ENST00000508524 CXorf36Q9H7Y0 433 aa6.6□□□□□ -1.35
TOPBP1-206ENST00000508524 PADI4Q9UM07 663 aa6.6□□□□□ -1.35
TOPBP1-206ENST00000508524 SH2B3Q9UQQ2 575 aa6.6□□□□□ -1.35
TOPBP1-206ENST00000508524 MRPS17Q9Y2R5 130 aaKnown RBP6.6□□□□□ -1.35
TOPBP1-206ENST00000508524 EID1Q9Y6B2 187 aa6.6□□□□□ -1.35
TOPBP1-206ENST00000508524 MANSC4A6NHS7 340 aaPredicted RBP6.59□□□□□ -1.35
TOPBP1-206ENST00000508524 BTN3A1O00481 513 aa6.59□□□□□ -1.35
TOPBP1-206ENST00000508524 ZNF213O14771 459 aa6.59□□□□□ -1.35
TOPBP1-206ENST00000508524 PHGDHO43175 533 aaKnown RBP6.59□□□□□ -1.35
TOPBP1-206ENST00000508524 CSF1RP07333 972 aa6.59□□□□□ -1.35
TOPBP1-206ENST00000508524 CYP2C9P11712 490 aa6.59□□□□□ -1.35
TOPBP1-206ENST00000508524 NDUFB7P17568 137 aa6.59□□□□□ -1.35
TOPBP1-206ENST00000508524 LRPAP1P30533 357 aa6.59□□□□□ -1.35
TOPBP1-206ENST00000508524 ALDH9A1P49189 494 aa6.59□□□□□ -1.35
TOPBP1-206ENST00000508524 ATXN1P54253 815 aaKnown RBP6.59□□□□□ -1.35
TOPBP1-206ENST00000508524 TFF2Q03403 129 aa6.59□□□□□ -1.35
TOPBP1-206ENST00000508524 MYO1EQ12965 1108 aa6.59□□□□□ -1.35
TOPBP1-206ENST00000508524 CTBP1Q13363 440 aa6.59□□□□□ -1.35
TOPBP1-206ENST00000508524 E2F2Q14209 437 aa6.59□□□□□ -1.35
TOPBP1-206ENST00000508524 PPP2R5AQ15172 486 aa6.59□□□□□ -1.35
TOPBP1-206ENST00000508524 LMBRD2Q68DH5 695 aaPredicted RBP6.59□□□□□ -1.35
TOPBP1-206ENST00000508524 NXNQ6DKJ4 435 aa6.59□□□□□ -1.35
TOPBP1-206ENST00000508524 ANKRD16Q6P6B7 361 aa6.59□□□□□ -1.35
TOPBP1-206ENST00000508524 MAEAQ7L5Y9 396 aa6.59□□□□□ -1.35
TOPBP1-206ENST00000508524 PTF1AQ7RTS3 328 aa6.59□□□□□ -1.35
TOPBP1-206ENST00000508524 TCEAL8Q8IYN2 117 aa6.59□□□□□ -1.35
TOPBP1-206ENST00000508524 KIAA0319LQ8IZA0 1049 aa6.59□□□□□ -1.35
TOPBP1-206ENST00000508524 OR6B3Q8NGW1 331 aa6.59□□□□□ -1.35
TOPBP1-206ENST00000508524 SMURF2Q9HAU4 748 aa6.59□□□□□ -1.35
TOPBP1-206ENST00000508524 DLL3Q9NYJ7 618 aa6.59□□□□□ -1.35
TOPBP1-206ENST00000508524 CC2D2AQ9P2K1 1620 aa6.58□□□□□ -1.36
TOPBP1-206ENST00000508524 MYO1CO00159 1063 aa6.58□□□□□ -1.36
TOPBP1-206ENST00000508524 ONECUT2O95948 504 aa6.58□□□□□ -1.36
TOPBP1-206ENST00000508524 FESP07332 822 aa6.58□□□□□ -1.36
TOPBP1-206ENST00000508524 U2AF1L5P0DN76 240 aaPredicted RBP6.58□□□□□ -1.36
TOPBP1-206ENST00000508524 EN2P19622 333 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms