RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 C2orf71A6NGG8 1288 aa9.18□□□□□ -0.94
USP46-207ENST00000508499 GRM6O15303 877 aa9.18□□□□□ -0.94
USP46-207ENST00000508499 MED7O43513 233 aa9.18□□□□□ -0.94
USP46-207ENST00000508499 SERPING1P05155 500 aa9.18□□□□□ -0.94
USP46-207ENST00000508499 ATF2P15336 505 aa9.18□□□□□ -0.94
USP46-207ENST00000508499 CYP11B1P15538 503 aa9.18□□□□□ -0.94
USP46-207ENST00000508499 DNAJB1P25685 340 aa9.18□□□□□ -0.94
USP46-207ENST00000508499 CDH5P33151 784 aaPredicted RBP9.18□□□□□ -0.94
USP46-207ENST00000508499 MAGEA11P43364 429 aa9.18□□□□□ -0.94
USP46-207ENST00000508499 RAP1GAPP47736 663 aa9.18□□□□□ -0.94
USP46-207ENST00000508499 PDE6CP51160 858 aa9.18□□□□□ -0.94
USP46-207ENST00000508499 PTPROQ16827 1216 aa9.18□□□□□ -0.94
USP46-207ENST00000508499 CTXN3Q4LDR2 81 aa9.18□□□□□ -0.94
USP46-207ENST00000508499 PKDCCQ504Y2 493 aa9.18□□□□□ -0.94
USP46-207ENST00000508499 PPP1R2P3Q6NXS1 205 aa9.18□□□□□ -0.94
USP46-207ENST00000508499 LILRA6Q6PI73 481 aa9.18□□□□□ -0.94
USP46-207ENST00000508499 WDR59Q6PJI9 974 aa9.18□□□□□ -0.94
USP46-207ENST00000508499 LCLAT1Q6UWP7 414 aa9.18□□□□□ -0.94
USP46-207ENST00000508499 VSTM1Q6UX27 236 aa9.18□□□□□ -0.94
USP46-207ENST00000508499 SCARA5Q6ZMJ2 495 aa9.18□□□□□ -0.94
USP46-207ENST00000508499 C4orf50Q6ZRC1 276 aa9.18□□□□□ -0.94
USP46-207ENST00000508499 SPPL2BQ8TCT7 592 aa9.18□□□□□ -0.94
USP46-207ENST00000508499 STK32AQ8WU08 396 aa9.18□□□□□ -0.94
USP46-207ENST00000508499 ZNF606Q8WXB4 792 aa9.18□□□□□ -0.94
USP46-207ENST00000508499 RIN2Q8WYP3 895 aaPredicted RBP9.18□□□□□ -0.94
USP46-207ENST00000508499 ELMO3Q96BJ8 720 aa9.18□□□□□ -0.94
USP46-207ENST00000508499 MRPL38Q96DV4 380 aaKnown RBP9.18□□□□□ -0.94
USP46-207ENST00000508499 CDCA3Q99618 268 aaPredicted RBP9.18□□□□□ -0.94
USP46-207ENST00000508499 TCF25Q9BQ70 676 aa9.18□□□□□ -0.94
USP46-207ENST00000508499 EMILIN2Q9BXX0 1053 aa9.18□□□□□ -0.94
USP46-207ENST00000508499 ZNF518BQ9C0D4 1074 aa9.18□□□□□ -0.94
USP46-207ENST00000508499 ALG13Q9NP73 1137 aaKnown RBP9.18□□□□□ -0.94
USP46-207ENST00000508499 CRTAC1Q9NQ79 661 aa9.18□□□□□ -0.94
USP46-207ENST00000508499 CYLDQ9NQC7 956 aa9.18□□□□□ -0.94
USP46-207ENST00000508499 HMGXB4Q9UGU5 601 aa9.18□□□□□ -0.94
USP46-207ENST00000508499 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.18□□□□□ -0.94
USP46-207ENST00000508499 TIMM13Q9Y5L4 95 aaPredicted RBP9.18□□□□□ -0.94
USP46-207ENST00000508499 ATP8B3O60423 1300 aa9.18□□□□□ -0.94
USP46-207ENST00000508499 OBSL1O75147 1896 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 O00370 1275 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 CYP26A1O43174 497 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 LSM8O95777 96 aaKnown RBP9.17□□□□□ -0.94
USP46-207ENST00000508499 ADH1AP07327 375 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 POU2F2P09086 479 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 SETSIPP0DME0 302 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 GZMAP12544 262 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 CD58P19256 250 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 GNA15P30679 374 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 RPL34P49207 117 aaKnown RBP9.17□□□□□ -0.94
USP46-207ENST00000508499 ERVFC1P60507 584 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 CDR2Q01850 454 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 ROR1Q01973 937 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 CCDC173Q0VFZ6 552 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 KCNC3Q14003 757 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 PTPN21Q16825 1174 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 TSR1Q2NL82 804 aaKnown RBP9.17□□□□□ -0.94
USP46-207ENST00000508499 ASTE1Q2TB18 679 aaPredicted RBP9.17□□□□□ -0.94
USP46-207ENST00000508499 SGO2Q562F6 1265 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 E4F1Q66K89 784 aaPredicted RBP9.17□□□□□ -0.94
USP46-207ENST00000508499 RSPO2Q6UXX9 243 aaPredicted RBP9.17□□□□□ -0.94
USP46-207ENST00000508499 TRIM72Q6ZMU5 477 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 TMC7Q7Z402 723 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 SPRED2Q7Z698 418 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 ACOT1Q86TX2 421 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 LRRTM3Q86VH5 581 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 SLC47A2Q86VL8 602 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 CEP57Q86XR8 500 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 TCEAL8Q8IYN2 117 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 FUKQ8N0W3 1084 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 CCDC112Q8NEF3 446 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 OLIG1Q8TAK6 271 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 CYFIP2Q96F07 1278 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 PCED1BQ96HM7 432 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 ZSWIM1Q9BR11 485 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 RHOBTB2Q9BYZ6 727 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 AFF4Q9UHB7 1163 aaKnown RBP9.17□□□□□ -0.94
USP46-207ENST00000508499 DPP7Q9UHL4 492 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 CDY1Q9Y6F8 540 aa9.17□□□□□ -0.94
USP46-207ENST00000508499 WDR27A2RRH5 827 aa9.16□□□□□ -0.94
USP46-207ENST00000508499 MYBPHLA2RUH7 354 aa9.16□□□□□ -0.94
USP46-207ENST00000508499 TEX28O15482 410 aa9.16□□□□□ -0.94
USP46-207ENST00000508499 LCA5LO95447 670 aa9.16□□□□□ -0.94
USP46-207ENST00000508499 CXCL14O95715 111 aa9.16□□□□□ -0.94
USP46-207ENST00000508499 CYP1A1P04798 512 aaPredicted RBP9.16□□□□□ -0.94
USP46-207ENST00000508499 CNPP09543 421 aaKnown RBP9.16□□□□□ -0.94
USP46-207ENST00000508499 KRT5P13647 590 aa9.16□□□□□ -0.94
USP46-207ENST00000508499 HOXA9P31269 272 aa9.16□□□□□ -0.94
USP46-207ENST00000508499 BCAT1P54687 386 aa9.16□□□□□ -0.94
USP46-207ENST00000508499 COL19A1Q14993 1142 aa9.16□□□□□ -0.94
USP46-207ENST00000508499 PRSS55Q6UWB4 352 aaPredicted RBP9.16□□□□□ -0.94
USP46-207ENST00000508499 TMEM184AQ6ZMB5 413 aa9.16□□□□□ -0.94
USP46-207ENST00000508499 PAQR9Q6ZVX9 377 aa9.16□□□□□ -0.94
USP46-207ENST00000508499 NOP9Q86U38 636 aaKnown RBP9.16□□□□□ -0.94
USP46-207ENST00000508499 TMTC1Q8IUR5 882 aa9.16□□□□□ -0.94
USP46-207ENST00000508499 TMEM139Q8IV31 216 aa9.16□□□□□ -0.94
USP46-207ENST00000508499 CCDC170Q8IYT3 715 aa9.16□□□□□ -0.94
USP46-207ENST00000508499 SCML4Q8N228 414 aa9.16□□□□□ -0.94
USP46-207ENST00000508499 ANKRD52Q8NB46 1076 aa9.16□□□□□ -0.94
USP46-207ENST00000508499 SLC30A5Q8TAD4 765 aa9.16□□□□□ -0.94
USP46-207ENST00000508499 ARNTL2Q8WYA1 636 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms