RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 KCNAB3O43448 404 aa5.87□□□□□ -1.47
LINC01088-203ENST00000507476 EIF3JO75822 258 aaKnown RBP5.87□□□□□ -1.47
LINC01088-203ENST00000507476 PDCP20941 246 aa5.87□□□□□ -1.47
LINC01088-203ENST00000507476 EEFSECP57772 596 aaKnown RBP5.87□□□□□ -1.47
LINC01088-203ENST00000507476 FAM50AQ14320 339 aaKnown RBP5.87□□□□□ -1.47
LINC01088-203ENST00000507476 ODR4Q5SWX8 454 aa5.87□□□□□ -1.47
LINC01088-203ENST00000507476 TREML2Q5T2D2 321 aa5.87□□□□□ -1.47
LINC01088-203ENST00000507476 FAM160B1Q5W0V3 765 aa5.87□□□□□ -1.47
LINC01088-203ENST00000507476 ICE2Q659A1 982 aa5.87□□□□□ -1.47
LINC01088-203ENST00000507476 SLC9A4Q6AI14 798 aa5.87□□□□□ -1.47
LINC01088-203ENST00000507476 SLC2A7Q6PXP3 512 aa5.87□□□□□ -1.47
LINC01088-203ENST00000507476 WDR53Q7Z5U6 358 aaPredicted RBP5.87□□□□□ -1.47
LINC01088-203ENST00000507476 DDX17Q92841 729 aaKnown RBP5.87□□□□□ -1.47
LINC01088-203ENST00000507476 RGMAQ96B86 450 aa5.87□□□□□ -1.47
LINC01088-203ENST00000507476 SLC46A1Q96NT5 459 aa5.87□□□□□ -1.47
LINC01088-203ENST00000507476 KRTAP1-5Q9BYS1 174 aa5.87□□□□□ -1.47
LINC01088-203ENST00000507476 SLC52A1Q9NWF4 448 aa5.87□□□□□ -1.47
LINC01088-203ENST00000507476 HESX1Q9UBX0 185 aa5.87□□□□□ -1.47
LINC01088-203ENST00000507476 QSOX1O00391 747 aa5.86□□□□□ -1.47
LINC01088-203ENST00000507476 ADAMTS3O15072 1205 aa5.86□□□□□ -1.47
LINC01088-203ENST00000507476 SLC16A3O15427 465 aaKnown RBP5.86□□□□□ -1.47
LINC01088-203ENST00000507476 BMP15O95972 392 aa5.86□□□□□ -1.47
LINC01088-203ENST00000507476 TUBB4AP04350 444 aa5.86□□□□□ -1.47
LINC01088-203ENST00000507476 GNAI2P04899 355 aa5.86□□□□□ -1.47
LINC01088-203ENST00000507476 PIM1P11309 404 aaPredicted RBP5.86□□□□□ -1.47
LINC01088-203ENST00000507476 CYP4F2P78329 520 aa5.86□□□□□ -1.47
LINC01088-203ENST00000507476 PCID2Q5JVF3 399 aa5.86□□□□□ -1.47
LINC01088-203ENST00000507476 ZNF804AQ7Z570 1209 aa5.86□□□□□ -1.47
LINC01088-203ENST00000507476 FMNL3Q8IVF7 1028 aa5.86□□□□□ -1.47
LINC01088-203ENST00000507476 MIER2Q8N344 545 aa5.86□□□□□ -1.47
LINC01088-203ENST00000507476 PRR18Q8N4B5 295 aa5.86□□□□□ -1.47
LINC01088-203ENST00000507476 DENND1AQ8TEH3 1009 aa5.86□□□□□ -1.47
LINC01088-203ENST00000507476 MACROD1Q9BQ69 325 aa5.86□□□□□ -1.47
LINC01088-203ENST00000507476 DUSP22Q9NRW4 184 aa5.86□□□□□ -1.47
LINC01088-203ENST00000507476 BCCIPQ9P287 314 aaKnown RBP eCLIP5.86□□□□□ -1.47
LINC01088-203ENST00000507476 FEZ2Q9UHY8 353 aaPredicted RBP5.86□□□□□ -1.47
LINC01088-203ENST00000507476 SERTAD3Q9UJW9 196 aa5.86□□□□□ -1.47
LINC01088-203ENST00000507476 SH2B3Q9UQQ2 575 aa5.86□□□□□ -1.47
LINC01088-203ENST00000507476 SSX2IPQ9Y2D8 614 aa5.86□□□□□ -1.47
LINC01088-203ENST00000507476 PRC1O43663 620 aa5.85□□□□□ -1.47
LINC01088-203ENST00000507476 TLR5O60602 858 aa5.85□□□□□ -1.47
LINC01088-203ENST00000507476 TOP3BO95985 862 aaKnown RBP5.85□□□□□ -1.47
LINC01088-203ENST00000507476 FTLP02792 175 aaPredicted RBP5.85□□□□□ -1.47
LINC01088-203ENST00000507476 TYRP14679 529 aa5.85□□□□□ -1.47
LINC01088-203ENST00000507476 OS9Q13438 667 aaPredicted RBP5.85□□□□□ -1.47
LINC01088-203ENST00000507476 THEMIS2Q5TEJ8 643 aa5.85□□□□□ -1.47
LINC01088-203ENST00000507476 SFRP4Q6FHJ7 346 aaPredicted RBP5.85□□□□□ -1.47
LINC01088-203ENST00000507476 CPA6Q8N4T0 437 aa5.85□□□□□ -1.47
LINC01088-203ENST00000507476 TTYH3Q9C0H2 523 aa5.85□□□□□ -1.47
LINC01088-203ENST00000507476 GABBR1Q9UBS5 961 aa5.85□□□□□ -1.47
LINC01088-203ENST00000507476 PCDHA1Q9Y5I3 950 aa5.85□□□□□ -1.47
LINC01088-203ENST00000507476 IKBKBO14920 756 aa5.84□□□□□ -1.47
LINC01088-203ENST00000507476 DNAJB5O75953 348 aa5.84□□□□□ -1.47
LINC01088-203ENST00000507476 ONECUT2O95948 504 aa5.84□□□□□ -1.47
LINC01088-203ENST00000507476 PDGFRBP09619 1106 aa5.84□□□□□ -1.47
LINC01088-203ENST00000507476 ENGP17813 658 aa5.84□□□□□ -1.47
LINC01088-203ENST00000507476 MAP2K6P52564 334 aa5.84□□□□□ -1.47
LINC01088-203ENST00000507476 EVA1CP58658 441 aa5.84□□□□□ -1.47
LINC01088-203ENST00000507476 EXOSC9Q06265 439 aaKnown RBP5.84□□□□□ -1.47
LINC01088-203ENST00000507476 NAPRTQ6XQN6 538 aa5.84□□□□□ -1.47
LINC01088-203ENST00000507476 CHSY1Q86X52 802 aa5.84□□□□□ -1.47
LINC01088-203ENST00000507476 CAMKK2Q96RR4 588 aa5.84□□□□□ -1.47
LINC01088-203ENST00000507476 FSD1LQ9BXM9 530 aa5.84□□□□□ -1.47
LINC01088-203ENST00000507476 SPRTNQ9H040 489 aaPredicted RBP5.84□□□□□ -1.47
LINC01088-203ENST00000507476 LMBRD1Q9NUN5 540 aa5.84□□□□□ -1.47
LINC01088-203ENST00000507476 TYW1Q9NV66 732 aaKnown RBP5.84□□□□□ -1.47
LINC01088-203ENST00000507476 TBC1D30Q9Y2I9 924 aa5.84□□□□□ -1.47
LINC01088-203ENST00000507476 SMIM35A0A1B0GVV1 85 aa5.83□□□□□ -1.48
LINC01088-203ENST00000507476 PLIN1O60240 522 aa5.83□□□□□ -1.48
LINC01088-203ENST00000507476 FESP07332 822 aa5.83□□□□□ -1.48
LINC01088-203ENST00000507476 LOXL3P58215 753 aa5.83□□□□□ -1.48
LINC01088-203ENST00000507476 AMPD3Q01432 767 aa5.83□□□□□ -1.48
LINC01088-203ENST00000507476 LONRF3Q496Y0 759 aa5.83□□□□□ -1.48
LINC01088-203ENST00000507476 ARHGAP40Q5TG30 622 aa5.83□□□□□ -1.48
LINC01088-203ENST00000507476 CATSPERGQ6ZRH7 1159 aa5.83□□□□□ -1.48
LINC01088-203ENST00000507476 USP45Q70EL2 814 aa5.83□□□□□ -1.48
LINC01088-203ENST00000507476 SMC5Q8IY18 1101 aa5.83□□□□□ -1.48
LINC01088-203ENST00000507476 CYP2W1Q8TAV3 490 aa5.83□□□□□ -1.48
LINC01088-203ENST00000507476 ATG4AQ8WYN0 398 aa5.83□□□□□ -1.48
LINC01088-203ENST00000507476 PRSS22Q9GZN4 317 aa5.83□□□□□ -1.48
LINC01088-203ENST00000507476 PRDM16Q9HAZ2 1276 aa5.83□□□□□ -1.48
LINC01088-203ENST00000507476 HOMER2Q9NSB8 354 aa5.83□□□□□ -1.48
LINC01088-203ENST00000507476 GEMIN8Q9NWZ8 242 aaKnown RBP5.83□□□□□ -1.48
LINC01088-203ENST00000507476 ADAMTS5Q9UNA0 930 aa5.83□□□□□ -1.48
LINC01088-203ENST00000507476 WASHC2CQ9Y4E1 1318 aa5.82□□□□□ -1.48
LINC01088-203ENST00000507476 FNDC1Q4ZHG4 1894 aaPredicted RBP5.82□□□□□ -1.48
LINC01088-203ENST00000507476 PPEF2O14830 753 aa5.82□□□□□ -1.48
LINC01088-203ENST00000507476 DTNBO60941 627 aa5.82□□□□□ -1.48
LINC01088-203ENST00000507476 ATXN1LP0C7T5 689 aaKnown RBP5.82□□□□□ -1.48
LINC01088-203ENST00000507476 HDCP19113 662 aa5.82□□□□□ -1.48
LINC01088-203ENST00000507476 PPIFP30405 207 aaKnown RBP5.82□□□□□ -1.48
LINC01088-203ENST00000507476 LILRA4P59901 499 aa5.82□□□□□ -1.48
LINC01088-203ENST00000507476 HOXA4Q00056 320 aaPredicted RBP5.82□□□□□ -1.48
LINC01088-203ENST00000507476 BIRC2Q13490 618 aa5.82□□□□□ -1.48
LINC01088-203ENST00000507476 GALNT16Q8N428 558 aa5.82□□□□□ -1.48
LINC01088-203ENST00000507476 LRRC71Q8N4P6 559 aa5.82□□□□□ -1.48
LINC01088-203ENST00000507476 PNLDC1Q8NA58 520 aaKnown RBP5.82□□□□□ -1.48
LINC01088-203ENST00000507476 PTDSS2Q9BVG9 487 aa5.82□□□□□ -1.48
LINC01088-203ENST00000507476 PNPOQ9NVS9 261 aa5.82□□□□□ -1.48
LINC01088-203ENST00000507476 ELOVL5Q9NYP7 299 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms