RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 HMGA1P17096 107 aaKnown RBP16.59■□□□□ 0.25
MED28-204ENST00000506409 RFX1P22670 979 aa16.59■□□□□ 0.25
MED28-204ENST00000506409 VIPR2P41587 438 aa16.59■□□□□ 0.25
MED28-204ENST00000506409 MAGEA11P43364 429 aa16.59■□□□□ 0.25
MED28-204ENST00000506409 PMS1P54277 932 aaKnown RBP16.59■□□□□ 0.25
MED28-204ENST00000506409 CDH8P55286 799 aa16.59■□□□□ 0.25
MED28-204ENST00000506409 UBE2HP62256 183 aa16.59■□□□□ 0.25
MED28-204ENST00000506409 PFKPQ01813 784 aa16.59■□□□□ 0.25
MED28-204ENST00000506409 PPP3CAQ08209 521 aa16.59■□□□□ 0.25
MED28-204ENST00000506409 MDH1BQ5I0G3 518 aa16.59■□□□□ 0.25
MED28-204ENST00000506409 GPR158Q5T848 1215 aa16.59■□□□□ 0.25
MED28-204ENST00000506409 CWF19L1Q69YN2 538 aaKnown RBP16.59■□□□□ 0.25
MED28-204ENST00000506409 SCN4BQ8IWT1 228 aa16.59■□□□□ 0.25
MED28-204ENST00000506409 STKLD1Q8NE28 680 aa16.59■□□□□ 0.25
MED28-204ENST00000506409 TAF4BQ92750 862 aa16.59■□□□□ 0.25
MED28-204ENST00000506409 PCED1BQ96HM7 432 aa16.59■□□□□ 0.25
MED28-204ENST00000506409 IMPG2Q9BZV3 1241 aa16.59■□□□□ 0.25
MED28-204ENST00000506409 DPEP3Q9H4B8 488 aa16.59■□□□□ 0.25
MED28-204ENST00000506409 TRPV4Q9HBA0 871 aa16.59■□□□□ 0.25
MED28-204ENST00000506409 MAGED2Q9UNF1 606 aaPredicted RBP16.59■□□□□ 0.25
MED28-204ENST00000506409 KMT2EQ8IZD2 1858 aa16.59■□□□□ 0.25
MED28-204ENST00000506409 MUC6Q6W4X9 2439 aa16.58■□□□□ 0.25
MED28-204ENST00000506409 STK25O00506 426 aa16.58■□□□□ 0.24
MED28-204ENST00000506409 ASS1P00966 412 aaKnown RBP16.58■□□□□ 0.24
MED28-204ENST00000506409 NPR3P17342 541 aa16.58■□□□□ 0.24
MED28-204ENST00000506409 PTPN1P18031 435 aaKnown RBP16.58■□□□□ 0.24
MED28-204ENST00000506409 BDNFP23560 247 aa16.58■□□□□ 0.24
MED28-204ENST00000506409 PPP1R2P41236 205 aa16.58■□□□□ 0.24
MED28-204ENST00000506409 RAP1GAPP47736 663 aa16.58■□□□□ 0.24
MED28-204ENST00000506409 CLCN5P51795 746 aa16.58■□□□□ 0.24
MED28-204ENST00000506409 CYP4F8P98187 520 aa16.58■□□□□ 0.24
MED28-204ENST00000506409 FKBP3Q00688 224 aaKnown RBP16.58■□□□□ 0.24
MED28-204ENST00000506409 LRRC63Q05C16 580 aa16.58■□□□□ 0.24
MED28-204ENST00000506409 GRM2Q14416 872 aa16.58■□□□□ 0.24
MED28-204ENST00000506409 IER5LQ5T953 404 aa16.58■□□□□ 0.24
MED28-204ENST00000506409 ANKRD40Q6AI12 368 aa16.58■□□□□ 0.24
MED28-204ENST00000506409 VSTM1Q6UX27 236 aa16.58■□□□□ 0.24
MED28-204ENST00000506409 TMEM105Q8N8V8 129 aa16.58■□□□□ 0.24
MED28-204ENST00000506409 B3GALNT2Q8NCR0 500 aa16.58■□□□□ 0.24
MED28-204ENST00000506409 TAS1R2Q8TE23 839 aa16.58■□□□□ 0.24
MED28-204ENST00000506409 PRRX2Q99811 253 aa16.58■□□□□ 0.24
MED28-204ENST00000506409 TRMT61BQ9BVS5 477 aaKnown RBP16.58■□□□□ 0.24
MED28-204ENST00000506409 TMEM8AQ9HCN3 771 aa16.58■□□□□ 0.24
MED28-204ENST00000506409 TRIM49BA6NDI0 452 aa16.57■□□□□ 0.24
MED28-204ENST00000506409 SLC38A8A6NNN8 435 aa16.57■□□□□ 0.24
MED28-204ENST00000506409 SLC16A3O15427 465 aaKnown RBP16.57■□□□□ 0.24
MED28-204ENST00000506409 NOL4O94818 638 aa16.57■□□□□ 0.24
MED28-204ENST00000506409 PSMC3P17980 439 aa16.57■□□□□ 0.24
MED28-204ENST00000506409 AOC1P19801 751 aa16.57■□□□□ 0.24
MED28-204ENST00000506409 GTF2H1P32780 548 aa16.57■□□□□ 0.24
MED28-204ENST00000506409 GRIK1P39086 918 aa16.57■□□□□ 0.24
MED28-204ENST00000506409 NLRP12P59046 1061 aa16.57■□□□□ 0.24
MED28-204ENST00000506409 KRT39Q6A163 491 aa16.57■□□□□ 0.24
MED28-204ENST00000506409 SPOPLQ6IQ16 392 aa16.57■□□□□ 0.24
MED28-204ENST00000506409 VITQ6UXI7 678 aa16.57■□□□□ 0.24
MED28-204ENST00000506409 ARID3BQ8IVW6 561 aaPredicted RBP16.57■□□□□ 0.24
MED28-204ENST00000506409 ZC3H3Q8IXZ2 948 aaKnown RBP16.57■□□□□ 0.24
MED28-204ENST00000506409 DEPDC1BQ8WUY9 529 aa16.57■□□□□ 0.24
MED28-204ENST00000506409 E2F7Q96AV8 911 aa16.57■□□□□ 0.24
MED28-204ENST00000506409 DHTKD1Q96HY7 919 aaPredicted RBP16.57■□□□□ 0.24
MED28-204ENST00000506409 SHDQ96IW2 340 aa16.57■□□□□ 0.24
MED28-204ENST00000506409 SDCBP2Q9H190 292 aa16.57■□□□□ 0.24
MED28-204ENST00000506409 TASP1Q9H6P5 420 aa16.57■□□□□ 0.24
MED28-204ENST00000506409 BRD9Q9H8M2 597 aa16.57■□□□□ 0.24
MED28-204ENST00000506409 TBC1D17Q9HA65 648 aa16.57■□□□□ 0.24
MED28-204ENST00000506409 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.57■□□□□ 0.24
MED28-204ENST00000506409 UXTQ9UBK9 157 aaPredicted RBP16.57■□□□□ 0.24
MED28-204ENST00000506409 HEPACAM2A8MVW5 462 aa16.56■□□□□ 0.24
MED28-204ENST00000506409 BIN1O00499 593 aa16.56■□□□□ 0.24
MED28-204ENST00000506409 TRIM66O15016 1216 aa16.56■□□□□ 0.24
MED28-204ENST00000506409 STX10O60499 249 aa16.56■□□□□ 0.24
MED28-204ENST00000506409 F11P03951 625 aa16.56■□□□□ 0.24
MED28-204ENST00000506409 CD44P16070 742 aaKnown RBP16.56■□□□□ 0.24
MED28-204ENST00000506409 CCNE1P24864 410 aa16.56■□□□□ 0.24
MED28-204ENST00000506409 ANXA13P27216 316 aa16.56■□□□□ 0.24
MED28-204ENST00000506409 ASPAP45381 313 aa16.56■□□□□ 0.24
MED28-204ENST00000506409 MXI1P50539 228 aa16.56■□□□□ 0.24
MED28-204ENST00000506409 MCCD1P59942 119 aaPredicted RBP16.56■□□□□ 0.24
MED28-204ENST00000506409 NOP14P78316 857 aaKnown RBP16.56■□□□□ 0.24
MED28-204ENST00000506409 MLF2Q15773 248 aaPredicted RBP16.56■□□□□ 0.24
MED28-204ENST00000506409 SLC44A4Q53GD3 710 aa16.56■□□□□ 0.24
MED28-204ENST00000506409 KLHL10Q6JEL2 608 aa16.56■□□□□ 0.24
MED28-204ENST00000506409 TMEM150AQ86TG1 271 aa16.56■□□□□ 0.24
MED28-204ENST00000506409 GPIHBP1Q8IV16 184 aa16.56■□□□□ 0.24
MED28-204ENST00000506409 MFSD6LQ8IWD5 586 aa16.56■□□□□ 0.24
MED28-204ENST00000506409 CCDC150Q8NCX0 1101 aa16.56■□□□□ 0.24
MED28-204ENST00000506409 TRMT2BQ96GJ1 504 aaKnown RBP16.56■□□□□ 0.24
MED28-204ENST00000506409 TNIP3Q96KP6 325 aa16.56■□□□□ 0.24
MED28-204ENST00000506409 SPATA17Q96L03 361 aa16.56■□□□□ 0.24
MED28-204ENST00000506409 MYRFLQ96LU7 910 aa16.56■□□□□ 0.24
MED28-204ENST00000506409 ELOVL4Q9GZR5 314 aa16.56■□□□□ 0.24
MED28-204ENST00000506409 ZMYM5Q9UJ78 669 aa16.56■□□□□ 0.24
MED28-204ENST00000506409 WDFY4Q6ZS81 3184 aa16.56■□□□□ 0.24
MED28-204ENST00000506409 NCANO14594 1321 aa16.55■□□□□ 0.24
MED28-204ENST00000506409 DPYSL4O14531 572 aa16.55■□□□□ 0.24
MED28-204ENST00000506409 PI15O43692 258 aa16.55■□□□□ 0.24
MED28-204ENST00000506409 BMP6P22004 513 aa16.55■□□□□ 0.24
MED28-204ENST00000506409 GDI1P31150 447 aa16.55■□□□□ 0.24
MED28-204ENST00000506409 NUBP1P53384 320 aa16.55■□□□□ 0.24
MED28-204ENST00000506409 PRKCQQ04759 706 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms