RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 TMEM117Q9H0C3 514 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 DBNDD1Q9H9R9 158 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 FBXO6Q9NRD1 293 aaPredicted RBP16.66■□□□□ 0.26
SCLT1-208ENST00000506368 STRIP2Q9ULQ0 834 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 PCDHGA4Q9Y5G9 962 aa16.66■□□□□ 0.26
SCLT1-208ENST00000506368 I3L4J1 428 aa16.65■□□□□ 0.26
SCLT1-208ENST00000506368 ITGAVP06756 1048 aa16.65■□□□□ 0.26
SCLT1-208ENST00000506368 GTF2H1P32780 548 aa16.65■□□□□ 0.26
SCLT1-208ENST00000506368 RPL5P46777 297 aaKnown RBP16.65■□□□□ 0.26
SCLT1-208ENST00000506368 CHN2P52757 468 aa16.65■□□□□ 0.26
SCLT1-208ENST00000506368 USP46P62068 366 aa16.65■□□□□ 0.26
SCLT1-208ENST00000506368 DLG4P78352 724 aa16.65■□□□□ 0.26
SCLT1-208ENST00000506368 TRIM72Q6ZMU5 477 aa16.65■□□□□ 0.26
SCLT1-208ENST00000506368 OTOP1Q7RTM1 612 aa16.65■□□□□ 0.26
SCLT1-208ENST00000506368 RBM15BQ8NDT2 890 aaKnown RBP16.65■□□□□ 0.26
SCLT1-208ENST00000506368 NKD2Q969F2 451 aaPredicted RBP16.65■□□□□ 0.26
SCLT1-208ENST00000506368 DYDC2Q96IM9 177 aa16.65■□□□□ 0.26
SCLT1-208ENST00000506368 CCDC17Q96LX7 622 aa16.65■□□□□ 0.26
SCLT1-208ENST00000506368 OCEL1Q9H607 264 aa16.65■□□□□ 0.26
SCLT1-208ENST00000506368 SLC7A8Q9UHI5 535 aa16.65■□□□□ 0.26
SCLT1-208ENST00000506368 PPME1Q9Y570 386 aa16.65■□□□□ 0.26
SCLT1-208ENST00000506368 SCINQ9Y6U3 715 aa16.65■□□□□ 0.26
SCLT1-208ENST00000506368 ARHGAP10A1A4S6 786 aa16.65■□□□□ 0.26
SCLT1-208ENST00000506368 MT-ND3P03897 115 aa16.65■□□□□ 0.26
SCLT1-208ENST00000506368 TPP2P29144 1249 aaPredicted RBP16.65■□□□□ 0.26
SCLT1-208ENST00000506368 STIP1P31948 543 aaKnown RBP16.65■□□□□ 0.26
SCLT1-208ENST00000506368 HPCAP84074 193 aa16.65■□□□□ 0.26
SCLT1-208ENST00000506368 GPS1Q13098 491 aa16.65■□□□□ 0.26
SCLT1-208ENST00000506368 ANKRD20A4Q4UJ75 823 aa16.65■□□□□ 0.26
SCLT1-208ENST00000506368 PYROXD1Q8WU10 500 aa16.65■□□□□ 0.26
SCLT1-208ENST00000506368 HAUS1Q96CS2 278 aa16.65■□□□□ 0.26
SCLT1-208ENST00000506368 NMUR2Q9GZQ4 415 aa16.65■□□□□ 0.26
SCLT1-208ENST00000506368 ST6GALNAC4Q9H4F1 302 aa16.65■□□□□ 0.26
SCLT1-208ENST00000506368 Q9H521 79 aa16.65■□□□□ 0.26
SCLT1-208ENST00000506368 KCNQ5Q9NR82 932 aa16.65■□□□□ 0.26
SCLT1-208ENST00000506368 CNTN3Q9P232 1028 aa16.65■□□□□ 0.26
SCLT1-208ENST00000506368 SOX13Q9UN79 622 aa16.65■□□□□ 0.26
SCLT1-208ENST00000506368 ZNF148Q9UQR1 794 aa16.65■□□□□ 0.26
SCLT1-208ENST00000506368 E7ESA3 106 aa16.64■□□□□ 0.25
SCLT1-208ENST00000506368 SPAG6O75602 509 aa16.64■□□□□ 0.25
SCLT1-208ENST00000506368 SLC16A2P36021 539 aa16.64■□□□□ 0.25
SCLT1-208ENST00000506368 ZNF76P36508 570 aa16.64■□□□□ 0.25
SCLT1-208ENST00000506368 GCNT1Q02742 428 aa16.64■□□□□ 0.25
SCLT1-208ENST00000506368 USP4Q13107 963 aa16.64■□□□□ 0.25
SCLT1-208ENST00000506368 HIC1Q14526 733 aa16.64■□□□□ 0.25
SCLT1-208ENST00000506368 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.64■□□□□ 0.25
SCLT1-208ENST00000506368 C1orf220Q5T0J3 134 aa16.64■□□□□ 0.25
SCLT1-208ENST00000506368 LRRC38Q5VT99 294 aa16.64■□□□□ 0.25
SCLT1-208ENST00000506368 TPH2Q8IWU9 490 aa16.64■□□□□ 0.25
SCLT1-208ENST00000506368 RDH13Q8NBN7 331 aa16.64■□□□□ 0.25
SCLT1-208ENST00000506368 HELQQ8TDG4 1101 aa16.64■□□□□ 0.25
SCLT1-208ENST00000506368 MPP4Q96JB8 637 aa16.64■□□□□ 0.25
SCLT1-208ENST00000506368 WDR11Q9BZH6 1224 aa16.64■□□□□ 0.25
SCLT1-208ENST00000506368 EBF3Q9H4W6 596 aa16.64■□□□□ 0.25
SCLT1-208ENST00000506368 STN1Q9H668 368 aaKnown RBP16.64■□□□□ 0.25
SCLT1-208ENST00000506368 TMEM8AQ9HCN3 771 aa16.64■□□□□ 0.25
SCLT1-208ENST00000506368 RAB20Q9NX57 234 aa16.64■□□□□ 0.25
SCLT1-208ENST00000506368 SERPINB13Q9UIV8 391 aa16.64■□□□□ 0.25
SCLT1-208ENST00000506368 BLOC1S6Q9UL45 172 aa16.64■□□□□ 0.25
SCLT1-208ENST00000506368 SCN9AQ15858 1988 aa16.64■□□□□ 0.25
SCLT1-208ENST00000506368 WDR91A4D1P6 747 aa16.63■□□□□ 0.25
SCLT1-208ENST00000506368 CASQ2O14958 399 aaPredicted RBP16.63■□□□□ 0.25
SCLT1-208ENST00000506368 BAG2O95816 211 aa16.63■□□□□ 0.25
SCLT1-208ENST00000506368 HARSP12081 509 aaKnown RBP16.63■□□□□ 0.25
SCLT1-208ENST00000506368 NFX1Q12986 1120 aaKnown RBP16.63■□□□□ 0.25
SCLT1-208ENST00000506368 ADRM1Q16186 407 aa16.63■□□□□ 0.25
SCLT1-208ENST00000506368 EFHC1Q5JVL4 640 aa16.63■□□□□ 0.25
SCLT1-208ENST00000506368 BORAQ6PGQ7 559 aa16.63■□□□□ 0.25
SCLT1-208ENST00000506368 MKL1Q969V6 931 aa16.63■□□□□ 0.25
SCLT1-208ENST00000506368 CYTH2Q99418 400 aa16.63■□□□□ 0.25
SCLT1-208ENST00000506368 TTC1Q99614 292 aa16.63■□□□□ 0.25
SCLT1-208ENST00000506368 HEMGNQ9BXL5 484 aa16.63■□□□□ 0.25
SCLT1-208ENST00000506368 ZC3H12CQ9C0D7 883 aaKnown RBP16.63■□□□□ 0.25
SCLT1-208ENST00000506368 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.63■□□□□ 0.25
SCLT1-208ENST00000506368 ZNFX1Q9P2E3 1918 aaKnown RBP16.63■□□□□ 0.25
SCLT1-208ENST00000506368 MYH11P35749 1972 aa16.63■□□□□ 0.25
SCLT1-208ENST00000506368 K7ENM7 598 aa16.63■□□□□ 0.25
SCLT1-208ENST00000506368 SERPINA6P08185 405 aa16.63■□□□□ 0.25
SCLT1-208ENST00000506368 BMP3P12645 472 aa16.63■□□□□ 0.25
SCLT1-208ENST00000506368 VCLP18206 1134 aa16.63■□□□□ 0.25
SCLT1-208ENST00000506368 ECE1P42892 770 aa16.63■□□□□ 0.25
SCLT1-208ENST00000506368 NSFP46459 744 aaKnown RBP16.63■□□□□ 0.25
SCLT1-208ENST00000506368 GPX6P59796 221 aa16.63■□□□□ 0.25
SCLT1-208ENST00000506368 KCTD1Q719H9 257 aa16.63■□□□□ 0.25
SCLT1-208ENST00000506368 PPIL6Q8IXY8 311 aa16.63■□□□□ 0.25
SCLT1-208ENST00000506368 RNF168Q8IYW5 571 aaPredicted RBP16.63■□□□□ 0.25
SCLT1-208ENST00000506368 DCAKDQ8WVC6 231 aa16.63■□□□□ 0.25
SCLT1-208ENST00000506368 KAT5Q92993 513 aa16.63■□□□□ 0.25
SCLT1-208ENST00000506368 THTPAQ9BU02 230 aa16.63■□□□□ 0.25
SCLT1-208ENST00000506368 IKZF4Q9H2S9 585 aa16.63■□□□□ 0.25
SCLT1-208ENST00000506368 TBCCD1Q9NVR7 557 aa16.63■□□□□ 0.25
SCLT1-208ENST00000506368 HSPBP1Q9NZL4 362 aa16.63■□□□□ 0.25
SCLT1-208ENST00000506368 FARP1Q9Y4F1 1045 aaPredicted RBP16.63■□□□□ 0.25
SCLT1-208ENST00000506368 CCNT2O60583 730 aaKnown RBP16.62■□□□□ 0.25
SCLT1-208ENST00000506368 PSMD10O75832 226 aa16.62■□□□□ 0.25
SCLT1-208ENST00000506368 IL1R1P14778 569 aa16.62■□□□□ 0.25
SCLT1-208ENST00000506368 VCPP55072 806 aaKnown RBP16.62■□□□□ 0.25
SCLT1-208ENST00000506368 FASTKD3Q14CZ7 662 aaKnown RBP16.62■□□□□ 0.25
SCLT1-208ENST00000506368 GRIK5Q16478 980 aa16.62■□□□□ 0.25
SCLT1-208ENST00000506368 TMEM126BQ8IUX1 230 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms