RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 TTC8Q8TAM2 541 aa17.93■□□□□ 0.46
PDLIM7-215ENST00000506161 C2orf15Q8WU43 125 aaKnown RBP17.93■□□□□ 0.46
PDLIM7-215ENST00000506161 DNASE1L2Q92874 299 aa17.93■□□□□ 0.46
PDLIM7-215ENST00000506161 MYLPFQ96A32 169 aa17.93■□□□□ 0.46
PDLIM7-215ENST00000506161 HINFPQ9BQA5 517 aa17.93■□□□□ 0.46
PDLIM7-215ENST00000506161 SYT15Q9BQS2 421 aa17.93■□□□□ 0.46
PDLIM7-215ENST00000506161 SDCBP2Q9H190 292 aa17.93■□□□□ 0.46
PDLIM7-215ENST00000506161 MAPK8IP1Q9UQF2 711 aa17.93■□□□□ 0.46
PDLIM7-215ENST00000506161 CCL26Q9Y258 94 aa17.93■□□□□ 0.46
PDLIM7-215ENST00000506161 DNAH14Q0VDD8 3507 aa17.93■□□□□ 0.46
PDLIM7-215ENST00000506161 EXOC3O60645 756 aa17.92■□□□□ 0.46
PDLIM7-215ENST00000506161 C4BPAP04003 597 aaKnown RBP17.92■□□□□ 0.46
PDLIM7-215ENST00000506161 WARSP23381 471 aaKnown RBP17.92■□□□□ 0.46
PDLIM7-215ENST00000506161 HOXC13P31276 330 aa17.92■□□□□ 0.46
PDLIM7-215ENST00000506161 RAP1GAPP47736 663 aa17.92■□□□□ 0.46
PDLIM7-215ENST00000506161 MYL7Q01449 175 aa17.92■□□□□ 0.46
PDLIM7-215ENST00000506161 PFKPQ01813 784 aa17.92■□□□□ 0.46
PDLIM7-215ENST00000506161 TNK2Q07912 1038 aa17.92■□□□□ 0.46
PDLIM7-215ENST00000506161 FCHO2Q0JRZ9 810 aa17.92■□□□□ 0.46
PDLIM7-215ENST00000506161 TXNDC8Q6A555 127 aa17.92■□□□□ 0.46
PDLIM7-215ENST00000506161 ITIH5Q86UX2 942 aa17.92■□□□□ 0.46
PDLIM7-215ENST00000506161 PARD3BQ8TEW8 1205 aa17.92■□□□□ 0.46
PDLIM7-215ENST00000506161 CHFRQ96EP1 664 aa17.92■□□□□ 0.46
PDLIM7-215ENST00000506161 SLC22A12Q96S37 553 aa17.92■□□□□ 0.46
PDLIM7-215ENST00000506161 MAGED2Q9UNF1 606 aaPredicted RBP17.92■□□□□ 0.46
PDLIM7-215ENST00000506161 R4GN57 208 aa17.92■□□□□ 0.46
PDLIM7-215ENST00000506161 DMXL1Q9Y485 3027 aa17.92■□□□□ 0.46
PDLIM7-215ENST00000506161 A0A1W2PQ27 194 aa17.91■□□□□ 0.46
PDLIM7-215ENST00000506161 A0A1W2PQ64 194 aa17.91■□□□□ 0.46
PDLIM7-215ENST00000506161 A0A1W2PQD8 194 aa17.91■□□□□ 0.46
PDLIM7-215ENST00000506161 SLC38A8A6NNN8 435 aa17.91■□□□□ 0.46
PDLIM7-215ENST00000506161 ZNF202O95125 648 aa17.91■□□□□ 0.46
PDLIM7-215ENST00000506161 NR3C1P04150 777 aa17.91■□□□□ 0.46
PDLIM7-215ENST00000506161 LHX1P48742 406 aa17.91■□□□□ 0.46
PDLIM7-215ENST00000506161 CDH8P55286 799 aa17.91■□□□□ 0.46
PDLIM7-215ENST00000506161 USP46P62068 366 aa17.91■□□□□ 0.46
PDLIM7-215ENST00000506161 SNRPFP62306 86 aaKnown RBP17.91■□□□□ 0.46
PDLIM7-215ENST00000506161 SMARCB1Q12824 385 aa17.91■□□□□ 0.46
PDLIM7-215ENST00000506161 MYO1EQ12965 1108 aa17.91■□□□□ 0.46
PDLIM7-215ENST00000506161 NFE2Q16621 373 aaPredicted RBP17.91■□□□□ 0.46
PDLIM7-215ENST00000506161 TXNDC11Q6PKC3 985 aa17.91■□□□□ 0.46
PDLIM7-215ENST00000506161 DPH6Q7L8W6 267 aa17.91■□□□□ 0.46
PDLIM7-215ENST00000506161 SMYD4Q8IYR2 804 aaPredicted RBP17.91■□□□□ 0.46
PDLIM7-215ENST00000506161 MAB21L3Q8N8X9 362 aa17.91■□□□□ 0.46
PDLIM7-215ENST00000506161 DEPDC1BQ8WUY9 529 aa17.91■□□□□ 0.46
PDLIM7-215ENST00000506161 SHDQ96IW2 340 aa17.91■□□□□ 0.46
PDLIM7-215ENST00000506161 FNBP1Q96RU3 617 aa17.91■□□□□ 0.46
PDLIM7-215ENST00000506161 TASP1Q9H6P5 420 aa17.91■□□□□ 0.46
PDLIM7-215ENST00000506161 SMYD3Q9H7B4 428 aa17.91■□□□□ 0.46
PDLIM7-215ENST00000506161 DLL3Q9NYJ7 618 aa17.91■□□□□ 0.46
PDLIM7-215ENST00000506161 USP25Q9UHP3 1055 aa17.91■□□□□ 0.46
PDLIM7-215ENST00000506161 NDRG2Q9UN36 371 aaKnown RBP17.91■□□□□ 0.46
PDLIM7-215ENST00000506161 EP300Q09472 2414 aaPredicted RBP17.91■□□□□ 0.46
PDLIM7-215ENST00000506161 NOL4O94818 638 aa17.9■□□□□ 0.46
PDLIM7-215ENST00000506161 RHOBTB3O94955 611 aa17.9■□□□□ 0.46
PDLIM7-215ENST00000506161 SP9P0CG40 484 aa17.9■□□□□ 0.46
PDLIM7-215ENST00000506161 BDNFP23560 247 aa17.9■□□□□ 0.46
PDLIM7-215ENST00000506161 CLDN10P78369 228 aa17.9■□□□□ 0.46
PDLIM7-215ENST00000506161 VEPH1Q14D04 833 aa17.9■□□□□ 0.46
PDLIM7-215ENST00000506161 WDR72Q3MJ13 1102 aa17.9■□□□□ 0.46
PDLIM7-215ENST00000506161 CFAP221Q4G0U5 840 aa17.9■□□□□ 0.46
PDLIM7-215ENST00000506161 SLC9A9Q8IVB4 645 aa17.9■□□□□ 0.46
PDLIM7-215ENST00000506161 C1orf210Q8IVY1 113 aa17.9■□□□□ 0.46
PDLIM7-215ENST00000506161 SCN4BQ8IWT1 228 aa17.9■□□□□ 0.46
PDLIM7-215ENST00000506161 SPATA18Q8TC71 538 aa17.9■□□□□ 0.46
PDLIM7-215ENST00000506161 ERCC4Q92889 916 aaPredicted RBP17.9■□□□□ 0.46
PDLIM7-215ENST00000506161 USP13Q92995 863 aaPredicted RBP17.9■□□□□ 0.46
PDLIM7-215ENST00000506161 CLDN23Q96B33 292 aa17.9■□□□□ 0.46
PDLIM7-215ENST00000506161 PCED1BQ96HM7 432 aa17.9■□□□□ 0.46
PDLIM7-215ENST00000506161 MMS19Q96T76 1030 aa17.9■□□□□ 0.46
PDLIM7-215ENST00000506161 GPR88Q9GZN0 384 aa17.9■□□□□ 0.46
PDLIM7-215ENST00000506161 ABCB6Q9NP58 842 aa17.9■□□□□ 0.46
PDLIM7-215ENST00000506161 TRPV5Q9NQA5 729 aa17.9■□□□□ 0.46
PDLIM7-215ENST00000506161 GTSE1Q9NYZ3 720 aa17.9■□□□□ 0.46
PDLIM7-215ENST00000506161 PIAS3Q9Y6X2 628 aa17.9■□□□□ 0.46
PDLIM7-215ENST00000506161 NCOR2Q9Y618 2525 aa17.9■□□□□ 0.46
PDLIM7-215ENST00000506161 MYOFQ9NZM1 2061 aa17.89■□□□□ 0.45
PDLIM7-215ENST00000506161 OTOL1A6NHN0 477 aaPredicted RBP17.89■□□□□ 0.45
PDLIM7-215ENST00000506161 CLDN5O00501 218 aa17.89■□□□□ 0.45
PDLIM7-215ENST00000506161 PDXKO00764 312 aa17.89■□□□□ 0.45
PDLIM7-215ENST00000506161 ZNF263O14978 683 aa17.89■□□□□ 0.45
PDLIM7-215ENST00000506161 CCNE1P24864 410 aa17.89■□□□□ 0.45
PDLIM7-215ENST00000506161 CDC25CP30307 473 aa17.89■□□□□ 0.45
PDLIM7-215ENST00000506161 PSMD2Q13200 908 aa17.89■□□□□ 0.45
PDLIM7-215ENST00000506161 GAS6Q14393 721 aa17.89■□□□□ 0.45
PDLIM7-215ENST00000506161 MDH1BQ5I0G3 518 aa17.89■□□□□ 0.45
PDLIM7-215ENST00000506161 TSSK4Q6SA08 328 aa17.89■□□□□ 0.45
PDLIM7-215ENST00000506161 SPATA2LQ8IUW3 424 aaPredicted RBP17.89■□□□□ 0.45
PDLIM7-215ENST00000506161 CMTM8Q8IZV2 173 aa17.89■□□□□ 0.45
PDLIM7-215ENST00000506161 IRF7Q92985 503 aa17.89■□□□□ 0.45
PDLIM7-215ENST00000506161 CYP2S1Q96SQ9 504 aa17.89■□□□□ 0.45
PDLIM7-215ENST00000506161 OSBPL6Q9BZF3 934 aa17.89■□□□□ 0.45
PDLIM7-215ENST00000506161 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.89■□□□□ 0.456e-7■■■■■ 67.2
PDLIM7-215ENST00000506161 RBM12Q9NTZ6 932 aaKnown RBP17.89■□□□□ 0.45
PDLIM7-215ENST00000506161 CGNQ9P2M7 1197 aaKnown RBP17.89■□□□□ 0.45
PDLIM7-215ENST00000506161 NXF1Q9UBU9 619 aaKnown RBP17.89■□□□□ 0.45
PDLIM7-215ENST00000506161 HMGXB4Q9UGU5 601 aa17.89■□□□□ 0.45
PDLIM7-215ENST00000506161 CDH9Q9ULB4 789 aa17.89■□□□□ 0.45
PDLIM7-215ENST00000506161 CHADO15335 359 aa17.88■□□□□ 0.45
PDLIM7-215ENST00000506161 TACC1O75410 805 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms