RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 FRYLO94915 3013 aa11.53□□□□□ -0.56
CPNE4-206ENST00000505957 NOTCH4Q99466 2003 aa11.52□□□□□ -0.56
CPNE4-206ENST00000505957 P4HA2O15460 535 aa11.52□□□□□ -0.57
CPNE4-206ENST00000505957 ZSCAN12O43309 604 aa11.52□□□□□ -0.57
CPNE4-206ENST00000505957 LRG1P02750 347 aa11.52□□□□□ -0.57
CPNE4-206ENST00000505957 ADRB1P08588 477 aa11.52□□□□□ -0.57
CPNE4-206ENST00000505957 ATF2P15336 505 aa11.52□□□□□ -0.57
CPNE4-206ENST00000505957 CEBPBP17676 345 aa11.52□□□□□ -0.57
CPNE4-206ENST00000505957 GARTP22102 1010 aa11.52□□□□□ -0.57
CPNE4-206ENST00000505957 FCARP24071 287 aa11.52□□□□□ -0.57
CPNE4-206ENST00000505957 TKTP29401 623 aaKnown RBP11.52□□□□□ -0.57
CPNE4-206ENST00000505957 ELF1P32519 619 aa11.52□□□□□ -0.57
CPNE4-206ENST00000505957 CLCNKBP51801 687 aa11.52□□□□□ -0.57
CPNE4-206ENST00000505957 EFNA5P52803 228 aa11.52□□□□□ -0.57
CPNE4-206ENST00000505957 MLLT6P55198 1093 aaPredicted RBP11.52□□□□□ -0.57
CPNE4-206ENST00000505957 ROR1Q01973 937 aa11.52□□□□□ -0.57
CPNE4-206ENST00000505957 KCNMA1Q12791 1236 aa11.52□□□□□ -0.57
CPNE4-206ENST00000505957 KCNH2Q12809 1159 aa11.52□□□□□ -0.57
CPNE4-206ENST00000505957 TMEM132AQ24JP5 1023 aa11.52□□□□□ -0.57
CPNE4-206ENST00000505957 LAIR1Q6GTX8 287 aa11.52□□□□□ -0.57
CPNE4-206ENST00000505957 INTS8Q75QN2 995 aaKnown RBP11.52□□□□□ -0.57
CPNE4-206ENST00000505957 APBB1IPQ7Z5R6 666 aaPredicted RBP11.52□□□□□ -0.57
CPNE4-206ENST00000505957 TCEAL8Q8IYN2 117 aa11.52□□□□□ -0.57
CPNE4-206ENST00000505957 SYCP3Q8IZU3 236 aa11.52□□□□□ -0.57
CPNE4-206ENST00000505957 NETO1Q8TDF5 533 aa11.52□□□□□ -0.57
CPNE4-206ENST00000505957 SYN2Q92777 582 aaPredicted RBP11.52□□□□□ -0.57
CPNE4-206ENST00000505957 TRMT61BQ9BVS5 477 aaKnown RBP11.52□□□□□ -0.57
CPNE4-206ENST00000505957 TMEM134Q9H6X4 195 aa11.52□□□□□ -0.57
CPNE4-206ENST00000505957 BRD9Q9H8M2 597 aa11.52□□□□□ -0.57
CPNE4-206ENST00000505957 POLD4Q9HCU8 107 aa11.52□□□□□ -0.57
CPNE4-206ENST00000505957 PARD6AQ9NPB6 346 aa11.52□□□□□ -0.57
CPNE4-206ENST00000505957 CEP72Q9P209 647 aa11.52□□□□□ -0.57
CPNE4-206ENST00000505957 RAB23Q9ULC3 237 aa11.52□□□□□ -0.57
CPNE4-206ENST00000505957 MYO6Q9UM54 1294 aa11.52□□□□□ -0.57
CPNE4-206ENST00000505957 F5P12259 2224 aa11.52□□□□□ -0.57
CPNE4-206ENST00000505957 KMT2BQ9UMN6 2715 aaPredicted RBP11.51□□□□□ -0.57
CPNE4-206ENST00000505957 DCDC2BA2VCK2 349 aa11.51□□□□□ -0.57
CPNE4-206ENST00000505957 RNF225M0QZC1 329 aaPredicted RBP11.51□□□□□ -0.57
CPNE4-206ENST00000505957 SLC30A4O14863 429 aa11.51□□□□□ -0.57
CPNE4-206ENST00000505957 SYN3O14994 580 aa11.51□□□□□ -0.57
CPNE4-206ENST00000505957 CLIC2O15247 247 aa11.51□□□□□ -0.57
CPNE4-206ENST00000505957 SLC16A4O15374 487 aa11.51□□□□□ -0.57
CPNE4-206ENST00000505957 EDN1P05305 212 aa11.51□□□□□ -0.57
CPNE4-206ENST00000505957 RETP07949 1114 aa11.51□□□□□ -0.57
CPNE4-206ENST00000505957 PSMC3P17980 439 aa11.51□□□□□ -0.57
CPNE4-206ENST00000505957 IGFBP6P24592 240 aaPredicted RBP11.51□□□□□ -0.57
CPNE4-206ENST00000505957 CASP4P49662 377 aa11.51□□□□□ -0.57
CPNE4-206ENST00000505957 CCR3P51677 355 aa11.51□□□□□ -0.57
CPNE4-206ENST00000505957 GOLGA8FQ08AF8 430 aa11.51□□□□□ -0.57
CPNE4-206ENST00000505957 GOLGA8DPQ0D2H9 430 aa11.51□□□□□ -0.57
CPNE4-206ENST00000505957 TSR1Q2NL82 804 aaKnown RBP11.51□□□□□ -0.57
CPNE4-206ENST00000505957 XKR4Q5GH76 650 aa11.51□□□□□ -0.57
CPNE4-206ENST00000505957 FAM78AQ5JUQ0 283 aa11.51□□□□□ -0.57
CPNE4-206ENST00000505957 EEF1DP3Q658K8 133 aa11.51□□□□□ -0.57
CPNE4-206ENST00000505957 TPGS2Q68CL5 300 aa11.51□□□□□ -0.57
CPNE4-206ENST00000505957 ALKAL1Q6UXT8 129 aa11.51□□□□□ -0.57
CPNE4-206ENST00000505957 C17orf53Q8N3J3 647 aaPredicted RBP11.51□□□□□ -0.57
CPNE4-206ENST00000505957 XXYLT1Q8NBI6 393 aa11.51□□□□□ -0.57
CPNE4-206ENST00000505957 NEK11Q8NG66 645 aa11.51□□□□□ -0.57
CPNE4-206ENST00000505957 DEPTORQ8TB45 409 aa11.51□□□□□ -0.57
CPNE4-206ENST00000505957 PPP1R13BQ96KQ4 1090 aa11.51□□□□□ -0.57
CPNE4-206ENST00000505957 ASB16Q96NS5 453 aa11.51□□□□□ -0.57
CPNE4-206ENST00000505957 TRPV4Q9HBA0 871 aa11.51□□□□□ -0.57
CPNE4-206ENST00000505957 ZNF334Q9HCZ1 680 aaPredicted RBP11.51□□□□□ -0.57
CPNE4-206ENST00000505957 MAFFQ9ULX9 164 aa11.51□□□□□ -0.57
CPNE4-206ENST00000505957 STYXL1Q9Y6J8 313 aa11.51□□□□□ -0.57
CPNE4-206ENST00000505957 VWA8A3KMH1 1905 aa11.5□□□□□ -0.57
CPNE4-206ENST00000505957 SMIM28A0A1B0GU29 152 aa11.5□□□□□ -0.57
CPNE4-206ENST00000505957 WDR27A2RRH5 827 aa11.5□□□□□ -0.57
CPNE4-206ENST00000505957 CCDC169A6NNP5 214 aa11.5□□□□□ -0.57
CPNE4-206ENST00000505957 H7C4K7 107 aa11.5□□□□□ -0.57
CPNE4-206ENST00000505957 PRRG1O14668 218 aa11.5□□□□□ -0.57
CPNE4-206ENST00000505957 FOXD2O60548 495 aaPredicted RBP11.5□□□□□ -0.57
CPNE4-206ENST00000505957 EXOC3O60645 756 aa11.5□□□□□ -0.57
CPNE4-206ENST00000505957 BRCC3P46736 316 aa11.5□□□□□ -0.57
CPNE4-206ENST00000505957 TERF1P54274 439 aa11.5□□□□□ -0.57
CPNE4-206ENST00000505957 BFSP1Q12934 665 aa11.5□□□□□ -0.57
CPNE4-206ENST00000505957 MRPL58Q14197 206 aaKnown RBP11.5□□□□□ -0.57
CPNE4-206ENST00000505957 GLRA4Q5JXX5 417 aa11.5□□□□□ -0.57
CPNE4-206ENST00000505957 CYP4A22Q5TCH4 519 aa11.5□□□□□ -0.57
CPNE4-206ENST00000505957 ATF7IP2Q5U623 682 aa11.5□□□□□ -0.57
CPNE4-206ENST00000505957 DPY19L2P1Q6NXN4 242 aa11.5□□□□□ -0.57
CPNE4-206ENST00000505957 C1orf228Q6PIY5 440 aa11.5□□□□□ -0.57
CPNE4-206ENST00000505957 WDR59Q6PJI9 974 aa11.5□□□□□ -0.57
CPNE4-206ENST00000505957 ZNF662Q6ZS27 426 aa11.5□□□□□ -0.57
CPNE4-206ENST00000505957 PDZD4Q76G19 769 aaPredicted RBP11.5□□□□□ -0.57
CPNE4-206ENST00000505957 TAS1R3Q7RTX0 852 aa11.5□□□□□ -0.57
CPNE4-206ENST00000505957 CCDC170Q8IYT3 715 aa11.5□□□□□ -0.57
CPNE4-206ENST00000505957 LEMD2Q8NC56 503 aa11.5□□□□□ -0.57
CPNE4-206ENST00000505957 C3orf58Q8NDZ4 430 aa11.5□□□□□ -0.57
CPNE4-206ENST00000505957 DEPDC1BQ8WUY9 529 aa11.5□□□□□ -0.57
CPNE4-206ENST00000505957 CPLX3Q8WVH0 158 aa11.5□□□□□ -0.57
CPNE4-206ENST00000505957 FAM3CQ92520 227 aa11.5□□□□□ -0.57
CPNE4-206ENST00000505957 BAP1Q92560 729 aa11.5□□□□□ -0.57
CPNE4-206ENST00000505957 SMARCD2Q92925 531 aa11.5□□□□□ -0.57
CPNE4-206ENST00000505957 TCEAL4Q96EI5 215 aa11.5□□□□□ -0.57
CPNE4-206ENST00000505957 MSANTD3Q96H12 275 aa11.5□□□□□ -0.57
CPNE4-206ENST00000505957 CORO1BQ9BR76 489 aa11.5□□□□□ -0.57
CPNE4-206ENST00000505957 GANQ9H2C0 597 aa11.5□□□□□ -0.57
CPNE4-206ENST00000505957 LMAN1LQ9HAT1 526 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms