RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 REXO1L1PQ8IX06 675 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 OR5M3Q8NGP4 307 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 ZBTB10Q96DT7 871 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 CHFRQ96EP1 664 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 MOGAT1Q96PD6 335 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 TMEM168Q9H0V1 697 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 OSBPL5Q9H0X9 879 aaPredicted RBP4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 OR10A2Q9H208 303 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 SLC6A15Q9H2J7 730 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 GPR35Q9HC97 309 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 SEPSECSQ9HD40 501 aaKnown RBP4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 TBC1D22BQ9NU19 505 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 GGA3Q9NZ52 723 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 SRP68Q9UHB9 627 aaKnown RBP4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 POLG2Q9UHN1 485 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 MID2Q9UJV3 735 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 CA14Q9ULX7 337 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 A0A0B4J269 797 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 NPEPPSL1A6NEC2 478 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 A6NLC8 198 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 PRSS47A8MTI9 375 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 K7ENM7 598 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 MUSKO15146 869 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 FIBPO43427 364 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 ASNA1O43681 348 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 FAM155BO75949 473 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 DNAJB5O75953 348 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 DDX58O95786 925 aaKnown RBP4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 GLP2RO95838 553 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 CHEK2O96017 543 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 SBK3P0C264 359 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 CYP2C9P11712 490 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 NPPBP16860 134 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 ACVR2AP27037 513 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 ADD2P35612 726 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 GZMKP49863 264 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 SELENOPP49908 381 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 MLLT6P55198 1093 aaPredicted RBP4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 UCP3P55916 312 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 BPIFB4P59827 614 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 PSMC1P62191 440 aaKnown RBP4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 SETQ01105 290 aaPredicted RBP4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 INSCQ1MX18 579 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 TRIM71Q2Q1W2 868 aaKnown RBP4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 ZNF585AQ6P3V2 769 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 TBC1D1Q86TI0 1168 aaPredicted RBP4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 THAP4Q8WY91 577 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 ZCCHC14Q8WYQ9 949 aaKnown RBP4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 SCAMP4Q969E2 229 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 SDCCAG3Q96C92 435 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 MAELQ96JY0 434 aaKnown RBP4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 PPP1R9BQ96SB3 815 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 MRI1Q9BV20 369 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 CARD11Q9BXL7 1154 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 MS4A7Q9GZW8 240 aaPredicted RBP4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 DHX36Q9H2U1 1008 aaKnown RBP4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 CD248Q9HCU0 757 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 VPS45Q9NRW7 570 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 IRAK4Q9NWZ3 460 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 CAPN11Q9UMQ6 739 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 AFG3L2Q9Y4W6 797 aa4.46□□□□□ -1.69
TRAPPC13-208ENST00000505553 LOC102723971A0A1B0GUV8 181 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 TCRBV7S2A1N4TA0A589 114 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 HMX3A6NHT5 357 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 TMEM233B4DJY2 109 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 B4E171 279 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 PJA2O43164 708 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 CCP110O43303 1012 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 HAUS5O94927 633 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 ZNF28P17035 718 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 CASRP41180 1078 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 TSPAN7P41732 249 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 CPT1AP50416 773 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 NAP1L1P55209 391 aaKnown RBP4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 WNT3P56703 355 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 VAMP2P63027 116 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 MAPK7Q13164 816 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 PRKG2Q13237 762 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 ARHGAP15Q53QZ3 475 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 ZMAT1Q5H9K5 638 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 MFSD14BQ5SR56 506 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 ATPAF1Q5TC12 328 aaPredicted RBP4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 LIN54Q6MZP7 749 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 KIAA0408Q6ZU52 694 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 LARP4Q71RC2 724 aaKnown RBP eCLIP4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 USP37Q86T82 979 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 CIR1Q86X95 450 aaPredicted RBP4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 CMTM4Q8IZR5 234 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 C1orf131Q8NDD1 294 aaKnown RBP4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 SIMC1Q8NDZ2 872 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 HERVK_113Q902F9 699 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 CFHR4Q92496 578 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 RSC1A1Q92681 617 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 NDC1Q9BTX1 674 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 SPATA5L1Q9BVQ7 753 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 CPEB1Q9BZB8 566 aaKnown RBP4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 PCDHAC1Q9H158 963 aa4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 ALG13Q9NP73 1137 aaKnown RBP4.46□□□□□ -1.7
TRAPPC13-208ENST00000505553 XPNPEP3Q9NQH7 507 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms