RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 TTC3P53804 2025 aa10.74□□□□□ -0.69
DDX41-203ENST00000504781 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.73□□□□□ -0.69
DDX41-203ENST00000504781 CASTOR2A6NHX0 329 aa10.73□□□□□ -0.69
DDX41-203ENST00000504781 SIGLEC16A6NMB1 481 aa10.73□□□□□ -0.69
DDX41-203ENST00000504781 MIF4GDA9UHW6 222 aaKnown RBP10.73□□□□□ -0.69
DDX41-203ENST00000504781 ENC1O14682 589 aa10.73□□□□□ -0.69
DDX41-203ENST00000504781 DDHD2O94830 711 aa10.73□□□□□ -0.69
DDX41-203ENST00000504781 ATP1A1P05023 1023 aaKnown RBP10.73□□□□□ -0.69
DDX41-203ENST00000504781 FGFR1P11362 822 aa10.73□□□□□ -0.69
DDX41-203ENST00000504781 ODC1P11926 461 aa10.73□□□□□ -0.69
DDX41-203ENST00000504781 RRM1P23921 792 aa10.73□□□□□ -0.69
DDX41-203ENST00000504781 GTF2F1P35269 517 aaKnown RBP eCLIP10.73□□□□□ -0.69
DDX41-203ENST00000504781 PAFAH1B1P43034 410 aa10.73□□□□□ -0.69
DDX41-203ENST00000504781 ACADSBP45954 432 aa10.73□□□□□ -0.69
DDX41-203ENST00000504781 SLC8A3P57103 927 aa10.73□□□□□ -0.69
DDX41-203ENST00000504781 SMAD3P84022 425 aaKnown RBP10.73□□□□□ -0.69
DDX41-203ENST00000504781 MAMLD1Q13495 774 aa10.73□□□□□ -0.69
DDX41-203ENST00000504781 ACAP1Q15027 740 aa10.73□□□□□ -0.69
DDX41-203ENST00000504781 MAPRE1Q15691 268 aaKnown RBP10.73□□□□□ -0.69
DDX41-203ENST00000504781 CLUL1Q15846 466 aa10.73□□□□□ -0.69
DDX41-203ENST00000504781 PPP1R26Q5T8A7 1209 aaPredicted RBP10.73□□□□□ -0.69
DDX41-203ENST00000504781 WSCD1Q658N2 575 aa10.73□□□□□ -0.69
DDX41-203ENST00000504781 TMEM110Q86TL2 294 aa10.73□□□□□ -0.69
DDX41-203ENST00000504781 ZDHHC17Q8IUH5 632 aa10.73□□□□□ -0.69
DDX41-203ENST00000504781 B3GALNT2Q8NCR0 500 aa10.73□□□□□ -0.69
DDX41-203ENST00000504781 MNS1Q8NEH6 495 aa10.73□□□□□ -0.69
DDX41-203ENST00000504781 ZNF564Q8TBZ8 553 aaPredicted RBP10.73□□□□□ -0.69
DDX41-203ENST00000504781 HES6Q96HZ4 224 aa10.73□□□□□ -0.69
DDX41-203ENST00000504781 RPGRIP1Q96KN7 1286 aa10.73□□□□□ -0.69
DDX41-203ENST00000504781 HSFY1Q96LI6 401 aa10.73□□□□□ -0.69
DDX41-203ENST00000504781 CDX2Q99626 313 aaPredicted RBP10.73□□□□□ -0.69
DDX41-203ENST00000504781 TBC1D13Q9NVG8 400 aa10.73□□□□□ -0.69
DDX41-203ENST00000504781 DDX43Q9NXZ2 648 aaKnown RBP10.73□□□□□ -0.69
DDX41-203ENST00000504781 IP6K2Q9UHH9 426 aa10.73□□□□□ -0.69
DDX41-203ENST00000504781 PCDHB8Q9UN66 801 aa10.73□□□□□ -0.69
DDX41-203ENST00000504781 COG5Q9UP83 839 aa10.73□□□□□ -0.69
DDX41-203ENST00000504781 FAN1Q9Y2M0 1017 aa10.73□□□□□ -0.69
DDX41-203ENST00000504781 HYOU1Q9Y4L1 999 aa10.73□□□□□ -0.69
DDX41-203ENST00000504781 TCRBV5S1A1TA0A578 114 aa10.72□□□□□ -0.69
DDX41-203ENST00000504781 TMEM191CA6NGB0 347 aa10.72□□□□□ -0.69
DDX41-203ENST00000504781 TADA2AO75478 443 aa10.72□□□□□ -0.69
DDX41-203ENST00000504781 ACRP10323 421 aa10.72□□□□□ -0.69
DDX41-203ENST00000504781 CSF2RAP15509 400 aa10.72□□□□□ -0.69
DDX41-203ENST00000504781 RPL34P49207 117 aaKnown RBP10.72□□□□□ -0.69
DDX41-203ENST00000504781 PLCB3Q01970 1234 aa10.72□□□□□ -0.69
DDX41-203ENST00000504781 CKAP4Q07065 602 aaKnown RBP10.72□□□□□ -0.69
DDX41-203ENST00000504781 ELAVL2Q12926 359 aaKnown RBP10.72□□□□□ -0.69
DDX41-203ENST00000504781 PPIGQ13427 754 aaKnown RBP eCLIP10.72□□□□□ -0.693e-8■■■□□ 16.8
DDX41-203ENST00000504781 PIGHQ14442 188 aaPredicted RBP10.72□□□□□ -0.69
DDX41-203ENST00000504781 MESDQ14696 234 aa10.72□□□□□ -0.69
DDX41-203ENST00000504781 MFSD5Q6N075 450 aa10.72□□□□□ -0.69
DDX41-203ENST00000504781 FAM171BQ6P995 826 aa10.72□□□□□ -0.69
DDX41-203ENST00000504781 DEFB128Q7Z7B8 93 aa10.72□□□□□ -0.69
DDX41-203ENST00000504781 ZNF280BQ86YH2 543 aa10.72□□□□□ -0.69
DDX41-203ENST00000504781 PASD1Q8IV76 773 aa10.72□□□□□ -0.69
DDX41-203ENST00000504781 C12orf29Q8N999 325 aa10.72□□□□□ -0.69
DDX41-203ENST00000504781 C3orf20Q8ND61 904 aa10.72□□□□□ -0.69
DDX41-203ENST00000504781 C1orf131Q8NDD1 294 aaKnown RBP10.72□□□□□ -0.69
DDX41-203ENST00000504781 UBA3Q8TBC4 463 aa10.72□□□□□ -0.69
DDX41-203ENST00000504781 TOP1MTQ969P6 601 aa10.72□□□□□ -0.69
DDX41-203ENST00000504781 OSBPL9Q96SU4 736 aa10.72□□□□□ -0.69
DDX41-203ENST00000504781 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.72□□□□□ -0.696e-9■■□□□ 13.4
DDX41-203ENST00000504781 PAAF1Q9BRP4 392 aa10.72□□□□□ -0.69
DDX41-203ENST00000504781 SLC4A5Q9BY07 1137 aa10.72□□□□□ -0.69
DDX41-203ENST00000504781 OXCT2Q9BYC2 517 aaPredicted RBP10.72□□□□□ -0.69
DDX41-203ENST00000504781 NRDE2Q9H7Z3 1164 aa10.72□□□□□ -0.69
DDX41-203ENST00000504781 HMGXB4Q9UGU5 601 aa10.72□□□□□ -0.69
DDX41-203ENST00000504781 TSPAN16Q9UKR8 245 aa10.72□□□□□ -0.69
DDX41-203ENST00000504781 NME7Q9Y5B8 376 aa10.72□□□□□ -0.69
DDX41-203ENST00000504781 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.71□□□□□ -0.69
DDX41-203ENST00000504781 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.71□□□□□ -0.69
DDX41-203ENST00000504781 CCDC66A2RUB6 948 aa10.71□□□□□ -0.69
DDX41-203ENST00000504781 EFCAB8A8MWE9 144 aa10.71□□□□□ -0.69
DDX41-203ENST00000504781 M0QYV0 167 aa10.71□□□□□ -0.69
DDX41-203ENST00000504781 SYN3O14994 580 aa10.71□□□□□ -0.69
DDX41-203ENST00000504781 CTIFO43310 598 aaKnown RBP10.71□□□□□ -0.69
DDX41-203ENST00000504781 DGKIO75912 1065 aa10.71□□□□□ -0.69
DDX41-203ENST00000504781 OAZ2O95190 189 aa10.71□□□□□ -0.69
DDX41-203ENST00000504781 FTCDO95954 541 aa10.71□□□□□ -0.69
DDX41-203ENST00000504781 KRT3P12035 628 aa10.71□□□□□ -0.69
DDX41-203ENST00000504781 SCNN1AP37088 669 aa10.71□□□□□ -0.69
DDX41-203ENST00000504781 BCAT1P54687 386 aa10.71□□□□□ -0.69
DDX41-203ENST00000504781 ITIH3Q06033 890 aa10.71□□□□□ -0.69
DDX41-203ENST00000504781 BST2Q10589 180 aaKnown RBP10.71□□□□□ -0.69
DDX41-203ENST00000504781 CFAP221Q4G0U5 840 aa10.71□□□□□ -0.69
DDX41-203ENST00000504781 PPP1R15BQ5SWA1 713 aa10.71□□□□□ -0.69
DDX41-203ENST00000504781 POTEHQ6S545 545 aa10.71□□□□□ -0.69
DDX41-203ENST00000504781 MMS22LQ6ZRQ5 1243 aa10.71□□□□□ -0.69
DDX41-203ENST00000504781 ARCQ7LC44 396 aa10.71□□□□□ -0.69
DDX41-203ENST00000504781 CREG2Q8IUH2 290 aa10.71□□□□□ -0.69
DDX41-203ENST00000504781 UBL4BQ8N7F7 174 aa10.71□□□□□ -0.69
DDX41-203ENST00000504781 C3orf58Q8NDZ4 430 aa10.71□□□□□ -0.69
DDX41-203ENST00000504781 MYCBPAPQ8TBZ2 947 aa10.71□□□□□ -0.69
DDX41-203ENST00000504781 FNIP1Q8TF40 1166 aa10.71□□□□□ -0.69
DDX41-203ENST00000504781 MYLIPQ8WY64 445 aa10.71□□□□□ -0.69
DDX41-203ENST00000504781 MCRS1Q96EZ8 462 aa10.71□□□□□ -0.69
DDX41-203ENST00000504781 NCAPGQ9BPX3 1015 aa10.71□□□□□ -0.69
DDX41-203ENST00000504781 C11orf70Q9BRQ4 267 aa10.71□□□□□ -0.69
DDX41-203ENST00000504781 DUSP16Q9BY84 665 aa10.71□□□□□ -0.69
DDX41-203ENST00000504781 TTYH1Q9H313 450 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms