RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 ERBB2P04626 1255 aa14.03□□□□□ -0.16
LMNA-220ENST00000504687 KRT3P12035 628 aa14.03□□□□□ -0.16
LMNA-220ENST00000504687 PTPN7P35236 360 aa14.03□□□□□ -0.16
LMNA-220ENST00000504687 ACADSBP45954 432 aa14.03□□□□□ -0.16
LMNA-220ENST00000504687 BCAT1P54687 386 aa14.03□□□□□ -0.16
LMNA-220ENST00000504687 PSMC1P62191 440 aaKnown RBP14.03□□□□□ -0.16
LMNA-220ENST00000504687 DSC1Q08554 894 aa14.03□□□□□ -0.16
LMNA-220ENST00000504687 BST2Q10589 180 aaKnown RBP14.03□□□□□ -0.16
LMNA-220ENST00000504687 CYP1B1Q16678 543 aa14.03□□□□□ -0.16
LMNA-220ENST00000504687 GOLGA7BQ2TAP0 167 aa14.03□□□□□ -0.16
LMNA-220ENST00000504687 SEL1L2Q5TEA6 688 aa14.03□□□□□ -0.16
LMNA-220ENST00000504687 DCLRE1AQ6PJP8 1040 aa14.03□□□□□ -0.16
LMNA-220ENST00000504687 ACOT1Q86TX2 421 aa14.03□□□□□ -0.16
LMNA-220ENST00000504687 TTC30AQ86WT1 665 aa14.03□□□□□ -0.16
LMNA-220ENST00000504687 EXD1Q8NHP7 514 aa14.03□□□□□ -0.16
LMNA-220ENST00000504687 LINC01599Q8WXQ3 324 aa14.03□□□□□ -0.16
LMNA-220ENST00000504687 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.03□□□□□ -0.16
LMNA-220ENST00000504687 LPPQ93052 612 aa14.03□□□□□ -0.16
LMNA-220ENST00000504687 BTBD6Q96KE9 485 aa14.03□□□□□ -0.16
LMNA-220ENST00000504687 HSFY1Q96LI6 401 aa14.03□□□□□ -0.16
LMNA-220ENST00000504687 RUNDC3BQ96NL0 473 aa14.03□□□□□ -0.16
LMNA-220ENST00000504687 DEFB118Q96PH6 123 aa14.03□□□□□ -0.16
LMNA-220ENST00000504687 PNKPQ96T60 521 aa14.03□□□□□ -0.16
LMNA-220ENST00000504687 TRIM7Q9C029 511 aa14.03□□□□□ -0.16
LMNA-220ENST00000504687 TMEM161AQ9NX61 479 aa14.03□□□□□ -0.16
LMNA-220ENST00000504687 CHORDC1Q9UHD1 332 aaPredicted RBP14.03□□□□□ -0.16
LMNA-220ENST00000504687 DSEQ9UL01 958 aa14.03□□□□□ -0.16
LMNA-220ENST00000504687 GOLGA6L10A0A0M3HER8 536 aa14.02□□□□□ -0.17
LMNA-220ENST00000504687 TMEM110-MUSTN1A8MSY1 372 aa14.02□□□□□ -0.17
LMNA-220ENST00000504687 FSCN2O14926 492 aa14.02□□□□□ -0.17
LMNA-220ENST00000504687 ZRANB2O95218 330 aaKnown RBP eCLIP14.02□□□□□ -0.17
LMNA-220ENST00000504687 FGGP02679 453 aa14.02□□□□□ -0.17
LMNA-220ENST00000504687 CXCL10P02778 98 aa14.02□□□□□ -0.17
LMNA-220ENST00000504687 RHOXF2BP0C7M4 288 aa14.02□□□□□ -0.17
LMNA-220ENST00000504687 TYMPP19971 482 aa14.02□□□□□ -0.17
LMNA-220ENST00000504687 SSTR3P32745 418 aaPredicted RBP14.02□□□□□ -0.17
LMNA-220ENST00000504687 PLA2G4AP47712 749 aa14.02□□□□□ -0.17
LMNA-220ENST00000504687 MNX1P50219 401 aaPredicted RBP14.02□□□□□ -0.17
LMNA-220ENST00000504687 CLCN6P51797 869 aa14.02□□□□□ -0.17
LMNA-220ENST00000504687 CLCNKBP51801 687 aa14.02□□□□□ -0.17
LMNA-220ENST00000504687 COPS2P61201 443 aa14.02□□□□□ -0.17
LMNA-220ENST00000504687 RPL7AP62424 266 aaKnown RBP14.02□□□□□ -0.17
LMNA-220ENST00000504687 PLCB3Q01970 1234 aa14.02□□□□□ -0.17
LMNA-220ENST00000504687 ZNF252P-AS1Q0IIN9 211 aa14.02□□□□□ -0.17
LMNA-220ENST00000504687 GPNMBQ14956 572 aa14.02□□□□□ -0.17
LMNA-220ENST00000504687 MTFR1Q15390 333 aa14.02□□□□□ -0.17
LMNA-220ENST00000504687 C2CD6Q53TS8 623 aa14.02□□□□□ -0.17
LMNA-220ENST00000504687 C8orf74Q6P047 294 aa14.02□□□□□ -0.17
LMNA-220ENST00000504687 DCUN1D2Q6PH85 259 aa14.02□□□□□ -0.17
LMNA-220ENST00000504687 GLB1LQ6UWU2 654 aa14.02□□□□□ -0.17
LMNA-220ENST00000504687 OSTM1Q86WC4 334 aa14.02□□□□□ -0.17
LMNA-220ENST00000504687 C12orf29Q8N999 325 aa14.02□□□□□ -0.17
LMNA-220ENST00000504687 C12orf50Q8NA57 414 aaPredicted RBP14.02□□□□□ -0.17
LMNA-220ENST00000504687 ANKLE1Q8NAG6 615 aa14.02□□□□□ -0.17
LMNA-220ENST00000504687 B3GALNT2Q8NCR0 500 aa14.02□□□□□ -0.17
LMNA-220ENST00000504687 RHOXF2Q9BQY4 288 aa14.02□□□□□ -0.17
LMNA-220ENST00000504687 UBXN6Q9BZV1 441 aa14.02□□□□□ -0.17
LMNA-220ENST00000504687 RNF208Q9H0X6 261 aa14.02□□□□□ -0.17
LMNA-220ENST00000504687 EHD2Q9NZN4 543 aa14.02□□□□□ -0.17
LMNA-220ENST00000504687 STIM2Q9P246 746 aa14.02□□□□□ -0.17
LMNA-220ENST00000504687 KRIT1O00522 736 aa14.01□□□□□ -0.17
LMNA-220ENST00000504687 DPYSL4O14531 572 aa14.01□□□□□ -0.17
LMNA-220ENST00000504687 XPO1O14980 1071 aaKnown RBP14.01□□□□□ -0.17
LMNA-220ENST00000504687 NBNO60934 754 aa14.01□□□□□ -0.17
LMNA-220ENST00000504687 PYGMP11217 842 aa14.01□□□□□ -0.17
LMNA-220ENST00000504687 ODC1P11926 461 aa14.01□□□□□ -0.17
LMNA-220ENST00000504687 LMO2P25791 158 aa14.01□□□□□ -0.17
LMNA-220ENST00000504687 RFC1P35251 1148 aaPredicted RBP14.01□□□□□ -0.17
LMNA-220ENST00000504687 MARCKSL1P49006 195 aa14.01□□□□□ -0.17
LMNA-220ENST00000504687 AFF1P51825 1210 aaKnown RBP14.01□□□□□ -0.17
LMNA-220ENST00000504687 ORC1Q13415 861 aa14.01□□□□□ -0.17
LMNA-220ENST00000504687 PKN2Q16513 984 aaKnown RBP14.01□□□□□ -0.17
LMNA-220ENST00000504687 LONRF2Q1L5Z9 754 aa14.01□□□□□ -0.17
LMNA-220ENST00000504687 LLGL2Q6P1M3 1020 aa14.01□□□□□ -0.17
LMNA-220ENST00000504687 CD300LGQ6UXG3 332 aa14.01□□□□□ -0.17
LMNA-220ENST00000504687 SLC13A5Q86YT5 568 aaPredicted RBP14.01□□□□□ -0.17
LMNA-220ENST00000504687 CRIPAKQ8N1N5 446 aa14.01□□□□□ -0.17
LMNA-220ENST00000504687 URGCPQ8TCY9 931 aa14.01□□□□□ -0.17
LMNA-220ENST00000504687 KCTD13Q8WZ19 329 aa14.01□□□□□ -0.17
LMNA-220ENST00000504687 SEC14L1Q92503 715 aa14.01□□□□□ -0.17
LMNA-220ENST00000504687 SEPT8Q92599 483 aa14.01□□□□□ -0.17
LMNA-220ENST00000504687 ARMC5Q96C12 935 aa14.01□□□□□ -0.17
LMNA-220ENST00000504687 SUSD3Q96L08 255 aa14.01□□□□□ -0.17
LMNA-220ENST00000504687 MCEEQ96PE7 176 aa14.01□□□□□ -0.17
LMNA-220ENST00000504687 LRRC1Q9BTT6 524 aa14.01□□□□□ -0.17
LMNA-220ENST00000504687 ARFGAP3Q9NP61 516 aa14.01□□□□□ -0.17
LMNA-220ENST00000504687 GDF3Q9NR23 364 aa14.01□□□□□ -0.17
LMNA-220ENST00000504687 DDX56Q9NY93 547 aaKnown RBP14.01□□□□□ -0.17
LMNA-220ENST00000504687 SMARCAL1Q9NZC9 954 aa14.01□□□□□ -0.17
LMNA-220ENST00000504687 CDH9Q9ULB4 789 aa14.01□□□□□ -0.17
LMNA-220ENST00000504687 EFR3BQ9Y2G0 817 aa14.01□□□□□ -0.17
LMNA-220ENST00000504687 SART1O43290 800 aaKnown RBP14□□□□□ -0.17
LMNA-220ENST00000504687 HOXA2O43364 376 aa14□□□□□ -0.17
LMNA-220ENST00000504687 PTPN1P18031 435 aaKnown RBP14□□□□□ -0.17
LMNA-220ENST00000504687 PCSK1P29120 753 aa14□□□□□ -0.17
LMNA-220ENST00000504687 CHRNA3P32297 505 aa14□□□□□ -0.17
LMNA-220ENST00000504687 PCK1P35558 622 aa14□□□□□ -0.17
LMNA-220ENST00000504687 DNA2P51530 1060 aa14□□□□□ -0.17
LMNA-220ENST00000504687 ZNF143P52747 638 aaPredicted RBP14□□□□□ -0.17
LMNA-220ENST00000504687 VSNL1P62760 191 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms