RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 SHDQ96IW2 340 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 C8orf48Q96LL4 319 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 SLITRK1Q96PX8 696 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 MED10Q9BTT4 135 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 PI4K2AQ9BTU6 479 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 GZF1Q9H116 711 aaPredicted RBP8.3□□□□□ -1.08
SKP2-203ENST00000504386 KCNK12Q9HB15 430 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 PNPLA8Q9NP80 782 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 DMAP1Q9NPF5 467 aaPredicted RBP8.3□□□□□ -1.08
SKP2-203ENST00000504386 COMMD8Q9NX08 183 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 CEP72Q9P209 647 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 GTF3C4Q9UKN8 822 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 KIAA1257Q9ULG3 409 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 SLC27A5Q9Y2P5 690 aa8.3□□□□□ -1.08
SKP2-203ENST00000504386 SCN1AP35498 2009 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 GTPBP10A4D1E9 387 aaKnown RBP8.29□□□□□ -1.08
SKP2-203ENST00000504386 PRR33A8MZF0 331 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 GPR37L1O60883 481 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 NOL4O94818 638 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 CAVIN2O95810 425 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 PYGBP11216 843 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 SRFP11831 508 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 BMP6P22004 513 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 RFX1P22670 979 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 SP100P23497 879 aaPredicted RBP8.29□□□□□ -1.08
SKP2-203ENST00000504386 EEF1GP26641 437 aaKnown RBP8.29□□□□□ -1.08
SKP2-203ENST00000504386 AVPR1AP37288 418 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 ASPAP45381 313 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 MTIF2P46199 727 aaKnown RBP8.29□□□□□ -1.08
SKP2-203ENST00000504386 PMS1P54277 932 aaKnown RBP8.29□□□□□ -1.08
SKP2-203ENST00000504386 STX17P56962 302 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 PLCB2Q00722 1185 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 STILQ15468 1287 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 STX1AQ16623 288 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 SKOR2Q2VWA4 1001 aaPredicted RBP8.29□□□□□ -1.08
SKP2-203ENST00000504386 MDH1BQ5I0G3 518 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 PRSS36Q5K4E3 855 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 C1orf220Q5T0J3 134 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 SCARA5Q6ZMJ2 495 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 RBM43Q6ZSC3 357 aaKnown RBP8.29□□□□□ -1.08
SKP2-203ENST00000504386 DENND5BQ6ZUT9 1274 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 LRRTM3Q86VH5 581 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 TRIM59Q8IWR1 403 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 SCN4BQ8IWT1 228 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 YAF2Q8IY57 180 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 OVCA2Q8WZ82 227 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 MYLPFQ96A32 169 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 EXOC4Q96A65 974 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 ELSPBP1Q96BH3 223 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 EEF2KMTQ96G04 330 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 MSANTD3Q96H12 275 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 PCED1BQ96HM7 432 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 MYRFLQ96LU7 910 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 TMEM209Q96SK2 561 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 PKMYT1Q99640 499 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 PRRX2Q99811 253 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 DUSP9Q99956 384 aaKnown RBP8.29□□□□□ -1.08
SKP2-203ENST00000504386 MRPL45Q9BRJ2 306 aaKnown RBP8.29□□□□□ -1.08
SKP2-203ENST00000504386 ATXN3LQ9H3M9 355 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 FBXO44Q9H4M3 255 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 TASP1Q9H6P5 420 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 SMYD3Q9H7B4 428 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 KIF9Q9HAQ2 790 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 TRPV4Q9HBA0 871 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 SLC2A4RGQ9NR83 387 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 THG1LQ9NWX6 298 aaKnown RBP8.29□□□□□ -1.08
SKP2-203ENST00000504386 WNT16Q9UBV4 365 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 MUTYHQ9UIF7 546 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 FBXL21Q9UKT6 434 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 DUSP12Q9UNI6 340 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 DAAM1Q9Y4D1 1078 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 CUL9Q8IWT3 2517 aa8.29□□□□□ -1.08
SKP2-203ENST00000504386 TCF20Q9UGU0 1960 aaKnown RBP8.28□□□□□ -1.08
SKP2-203ENST00000504386 PLXNA3P51805 1871 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 MYBPHLA2RUH7 354 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 CILPO75339 1184 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 FAM200BP0CF97 657 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 ATF6P18850 670 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 CYP2F1P24903 491 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 LMO2P25791 158 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 GABRR2P28476 465 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 NDST1P52848 882 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 MFAP3P55082 362 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 PSMC1P62191 440 aaKnown RBP8.28□□□□□ -1.08
SKP2-203ENST00000504386 AMPD2Q01433 879 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 GCNT1Q02742 428 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 KCNH2Q12809 1159 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 CUL2Q13617 745 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 HTR4Q13639 388 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 MAN2A1Q16706 1144 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 GBP6Q6ZN66 633 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 TRIM67Q6ZTA4 783 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 BMP8AQ7Z5Y6 402 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 TADA2BQ86TJ2 420 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 OSTM1Q86WC4 334 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 DDX42Q86XP3 938 aaKnown RBP eCLIP8.28□□□□□ -1.08
SKP2-203ENST00000504386 CREBRFQ8IUR6 639 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 SUGP1Q8IWZ8 645 aaKnown RBP8.28□□□□□ -1.08
SKP2-203ENST00000504386 KIAA1958Q8N8K9 716 aa8.28□□□□□ -1.08
SKP2-203ENST00000504386 ITFG1Q8TB96 612 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms