RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 ZNF365Q70YC5 407 aa10.33□□□□□ -0.76
COL1A1-210ENST00000504289 REM2Q8IYK8 340 aaPredicted RBP10.33□□□□□ -0.76
COL1A1-210ENST00000504289 HACE1Q8IYU2 909 aa10.33□□□□□ -0.76
COL1A1-210ENST00000504289 CRYBG2Q8N1P7 616 aa10.33□□□□□ -0.76
COL1A1-210ENST00000504289 C7orf31Q8N865 590 aa10.33□□□□□ -0.76
COL1A1-210ENST00000504289 CMASQ8NFW8 434 aaPredicted RBP10.33□□□□□ -0.76
COL1A1-210ENST00000504289 FBXO25Q8TCJ0 367 aa10.33□□□□□ -0.76
COL1A1-210ENST00000504289 UBLCP1Q8WVY7 318 aaPredicted RBP10.33□□□□□ -0.76
COL1A1-210ENST00000504289 RIN2Q8WYP3 895 aaPredicted RBP10.33□□□□□ -0.76
COL1A1-210ENST00000504289 TBCBQ99426 244 aa10.33□□□□□ -0.76
COL1A1-210ENST00000504289 MTG1Q9BT17 334 aaPredicted RBP10.33□□□□□ -0.76
COL1A1-210ENST00000504289 FAM49AQ9H0Q0 323 aaPredicted RBP10.33□□□□□ -0.76
COL1A1-210ENST00000504289 PRDM16Q9HAZ2 1276 aa10.33□□□□□ -0.76
COL1A1-210ENST00000504289 SPC25Q9HBM1 224 aa10.33□□□□□ -0.76
COL1A1-210ENST00000504289 SNTG2Q9NY99 539 aa10.33□□□□□ -0.76
COL1A1-210ENST00000504289 FLRT1Q9NZU1 646 aa10.33□□□□□ -0.76
COL1A1-210ENST00000504289 NEU2Q9Y3R4 380 aa10.33□□□□□ -0.76
COL1A1-210ENST00000504289 DOCK3Q8IZD9 2030 aa10.33□□□□□ -0.76
COL1A1-210ENST00000504289 MGAMO43451 1857 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 hCG_1818297A0A087WSY0 165 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 F8VP50 259 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 M0QYV0 167 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 M0QZ92 97 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 LIASO43766 372 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 CSDE1O75534 798 aaKnown RBP10.32□□□□□ -0.76
COL1A1-210ENST00000504289 TCEA3O75764 348 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 KRT14P02533 472 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 KRT1P04264 644 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 ITGAVP06756 1048 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 MYL3P08590 195 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 ATF2P15336 505 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 IVDP26440 423 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 LRPAP1P30533 357 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 CDKN2BP42772 138 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 SSR1P43307 286 aaKnown RBP10.32□□□□□ -0.76
COL1A1-210ENST00000504289 ACADSBP45954 432 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 RPL34P49207 117 aaKnown RBP10.32□□□□□ -0.76
COL1A1-210ENST00000504289 CDH8P55286 799 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 FCGRTP55899 365 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 ADCY2Q08462 1091 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 SV2CQ496J9 727 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 PKDCCQ504Y2 493 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 BOLA3Q53S33 107 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 FBXO47Q5MNV8 452 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 C9orf57Q5W0N0 161 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 SCARA3Q6AZY7 606 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 RHBDF2Q6PJF5 856 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 BBS12Q6ZW61 710 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 TMEM110Q86TL2 294 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 SESTD1Q86VW0 696 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 CPNE8Q86YQ8 564 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 TOP6BLQ8N6T0 577 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 SPATA18Q8TC71 538 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 TEKT4Q8WW24 435 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 C1orf54Q8WWF1 131 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 ARL8AQ96BM9 186 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 TWNKQ96RR1 684 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 CPXM1Q96SM3 734 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 OSMRQ99650 979 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 CAPS2Q9BXY5 557 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 SLC4A5Q9BY07 1137 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 TRIM31Q9BZY9 425 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 CNOT10Q9H9A5 744 aaKnown RBP10.32□□□□□ -0.76
COL1A1-210ENST00000504289 SLC38A7Q9NVC3 462 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 CALCOCO1Q9P1Z2 691 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 HESX1Q9UBX0 185 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 ASIC3Q9UHC3 531 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 USTQ9Y2C2 406 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 ATP8A1Q9Y2Q0 1164 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 TLL2Q9Y6L7 1015 aa10.32□□□□□ -0.76
COL1A1-210ENST00000504289 SMIM28A0A1B0GU29 152 aa10.31□□□□□ -0.76
COL1A1-210ENST00000504289 LRCH4O75427 683 aa10.31□□□□□ -0.76
COL1A1-210ENST00000504289 RECQL4O94761 1208 aa10.31□□□□□ -0.76
COL1A1-210ENST00000504289 TOMM70O94826 608 aa10.31□□□□□ -0.76
COL1A1-210ENST00000504289 ENDOD1O94919 500 aa10.31□□□□□ -0.76
COL1A1-210ENST00000504289 NR1D1P20393 614 aa10.31□□□□□ -0.76
COL1A1-210ENST00000504289 CYP2B6P20813 491 aa10.31□□□□□ -0.76
COL1A1-210ENST00000504289 FLT3P36888 993 aa10.31□□□□□ -0.76
COL1A1-210ENST00000504289 RAP1GAPP47736 663 aa10.31□□□□□ -0.76
COL1A1-210ENST00000504289 TAF6P49848 677 aa10.31□□□□□ -0.76
COL1A1-210ENST00000504289 VCPP55072 806 aaKnown RBP10.31□□□□□ -0.76
COL1A1-210ENST00000504289 OGDHQ02218 1023 aa10.31□□□□□ -0.76
COL1A1-210ENST00000504289 SLC25A11Q02978 314 aaKnown RBP10.31□□□□□ -0.76
COL1A1-210ENST00000504289 IFFO1Q0D2I5 559 aa10.31□□□□□ -0.76
COL1A1-210ENST00000504289 CBLBQ13191 982 aa10.31□□□□□ -0.76
COL1A1-210ENST00000504289 TFDP2Q14188 446 aa10.31□□□□□ -0.76
COL1A1-210ENST00000504289 PDK2Q15119 407 aa10.31□□□□□ -0.76
COL1A1-210ENST00000504289 C2CD6Q53TS8 623 aa10.31□□□□□ -0.76
COL1A1-210ENST00000504289 PRAMEF19Q5SWL8 479 aa10.31□□□□□ -0.76
COL1A1-210ENST00000504289 UBXN11Q5T124 520 aa10.31□□□□□ -0.76
COL1A1-210ENST00000504289 LLGL2Q6P1M3 1020 aa10.31□□□□□ -0.76
COL1A1-210ENST00000504289 MFSD7Q6UXD7 560 aa10.31□□□□□ -0.76
COL1A1-210ENST00000504289 PCGF5Q86SE9 256 aa10.31□□□□□ -0.76
COL1A1-210ENST00000504289 MAP7D3Q8IWC1 876 aa10.31□□□□□ -0.76
COL1A1-210ENST00000504289 DNAJB3Q8WWF6 145 aa10.31□□□□□ -0.76
COL1A1-210ENST00000504289 TNIP3Q96KP6 325 aa10.31□□□□□ -0.76
COL1A1-210ENST00000504289 HSFY1Q96LI6 401 aa10.31□□□□□ -0.76
COL1A1-210ENST00000504289 PLEKHA4Q9H4M7 779 aa10.31□□□□□ -0.76
COL1A1-210ENST00000504289 RSAD1Q9HA92 442 aa10.31□□□□□ -0.76
COL1A1-210ENST00000504289 PPCSQ9HAB8 311 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms