RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 hCG_1642624A0A1W2PR95 340 aa5.89□□□□□ -1.47
TRAPPC13-205ENST00000504243 RNASET2O00584 256 aaKnown RBP5.89□□□□□ -1.47
TRAPPC13-205ENST00000504243 PODXLO00592 558 aa5.89□□□□□ -1.47
TRAPPC13-205ENST00000504243 DCLK1O15075 740 aa5.89□□□□□ -1.47
TRAPPC13-205ENST00000504243 FFAR2O15552 330 aa5.89□□□□□ -1.47
TRAPPC13-205ENST00000504243 NCR1O76036 304 aa5.89□□□□□ -1.47
TRAPPC13-205ENST00000504243 PEX11BO96011 259 aa5.89□□□□□ -1.47
TRAPPC13-205ENST00000504243 IDEP14735 1019 aa5.89□□□□□ -1.47
TRAPPC13-205ENST00000504243 ACVR2AP27037 513 aa5.89□□□□□ -1.47
TRAPPC13-205ENST00000504243 CHKAP35790 457 aa5.89□□□□□ -1.47
TRAPPC13-205ENST00000504243 WNT3P56703 355 aa5.89□□□□□ -1.47
TRAPPC13-205ENST00000504243 MC2RQ01718 297 aa5.89□□□□□ -1.47
TRAPPC13-205ENST00000504243 ICA1Q05084 483 aa5.89□□□□□ -1.47
TRAPPC13-205ENST00000504243 ARHGEF7Q14155 803 aa5.89□□□□□ -1.47
TRAPPC13-205ENST00000504243 CCDC38Q502W7 563 aa5.89□□□□□ -1.47
TRAPPC13-205ENST00000504243 RABL3Q5HYI8 236 aa5.89□□□□□ -1.47
TRAPPC13-205ENST00000504243 ERAP2Q6P179 960 aa5.89□□□□□ -1.47
TRAPPC13-205ENST00000504243 ZNF483Q8TF39 744 aaPredicted RBP5.89□□□□□ -1.47
TRAPPC13-205ENST00000504243 CCT6BQ92526 530 aa5.89□□□□□ -1.47
TRAPPC13-205ENST00000504243 TRIM63Q969Q1 353 aa5.89□□□□□ -1.47
TRAPPC13-205ENST00000504243 LRIG1Q96JA1 1093 aa5.89□□□□□ -1.47
TRAPPC13-205ENST00000504243 ZNF747Q9BV97 191 aa5.89□□□□□ -1.47
TRAPPC13-205ENST00000504243 HEYLQ9NQ87 328 aaPredicted RBP5.89□□□□□ -1.47
TRAPPC13-205ENST00000504243 SLC39A10Q9ULF5 831 aa5.89□□□□□ -1.47
TRAPPC13-205ENST00000504243 hCG_1984214I3L0E3 225 aa5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 AREL1O15033 823 aa5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 SOAT2O75908 522 aa5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 SUN1O94901 812 aa5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 NDUFA10O95299 355 aa5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 NDST3O95803 873 aa5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 BTF3P20290 206 aaKnown RBP5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 HALP42357 657 aa5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 PTDSS1P48651 473 aaKnown RBP5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 PPM1FP49593 454 aaPredicted RBP5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 NDUFV1P49821 464 aa5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 CPT1AP50416 773 aa5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 ANXA11P50995 505 aaKnown RBP5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 ZNF134P52741 427 aa5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 LOXL3P58215 753 aa5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 RPS7P62081 194 aaKnown RBP5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 CXADRP78310 365 aa5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 PUM3Q15397 648 aaKnown RBP5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 CATSPERGQ6ZRH7 1159 aa5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 ZNF280BQ86YH2 543 aa5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 TMEM132CQ8N3T6 1108 aa5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 POC1BQ8TC44 478 aa5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 SNX19Q92543 992 aa5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 PPP2R3CQ969Q6 453 aa5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 MESP1Q9BRJ9 268 aa5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 EIF2AQ9BY44 585 aaKnown RBP5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 ALOXE3Q9BYJ1 711 aa5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 KRTAP4-9Q9BYQ8 210 aa5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 ZNF768Q9H5H4 540 aaKnown RBP5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 AKIP1Q9NQ31 210 aa5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 VSX1Q9NZR4 365 aaPredicted RBP5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 CEP72Q9P209 647 aa5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 CTTNBP2NLQ9P2B4 639 aa5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 KCNE5Q9UJ90 142 aa5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 MRPS17Q9Y2R5 130 aaKnown RBP5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 CHST2Q9Y4C5 530 aa5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 MORC2Q9Y6X9 1032 aaPredicted RBP5.88□□□□□ -1.47
TRAPPC13-205ENST00000504243 PRAMEF33A0A0G2JMD5 474 aa5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 FAM234BA2RU67 622 aa5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 MYADML2A6NDP7 307 aa5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 AHRRA9YTQ3 701 aa5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 HNRNPDLO14979 420 aaKnown RBP5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 TRIAP1O43715 76 aa5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 CREB3O43889 395 aa5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 PRAMEF10O60809 474 aa5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 PIAS2O75928 621 aa5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 ELANEP08246 267 aa5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 C1SP09871 688 aa5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 CD6P30203 668 aa5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 LRPAP1P30533 357 aa5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 NPTX2P47972 431 aa5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 ALDH9A1P49189 494 aa5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 TOB1P50616 345 aaPredicted RBP5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 TCF15Q12870 199 aa5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 RESTQ13127 1097 aa5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 DYRK1AQ13627 763 aa5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 BLMHQ13867 455 aa5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 TOB2Q14106 344 aaPredicted RBP5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 LCE5AQ5TCM9 118 aa5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 ARHGAP40Q5TG30 622 aa5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 CRIP3Q6Q6R5 217 aa5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 KCTD20Q7Z5Y7 419 aa5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 GAS2L3Q86XJ1 694 aa5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 COLGALT2Q8IYK4 626 aa5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 SPARTQ8N0X7 666 aa5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 BPIFB1Q8TDL5 484 aa5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 CACTINQ8WUQ7 758 aaKnown RBP5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 SCLT1Q96NL6 688 aa5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 HERPUD2Q9BSE4 406 aa5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 TTLL2Q9BWV7 592 aa5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 SLC46A2Q9BY10 475 aa5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 ZNF341Q9BYN7 854 aa5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 LRFN1Q9P244 771 aa5.87□□□□□ -1.47
TRAPPC13-205ENST00000504243 TRGV11A0A075B6L2 103 aa5.86□□□□□ -1.47
TRAPPC13-205ENST00000504243 A0A0B4J269 797 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms