RNA–Protein interactions for RNA: ENST00000504233.5

PAPD4-207, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 1 (best) BASIC

Gene PAPD4, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-207ENST00000504233 FOXN2P32314 431 aa11.87□□□□□ -0.51
PAPD4-207ENST00000504233 RFC5P40937 340 aa11.87□□□□□ -0.51
PAPD4-207ENST00000504233 ITIH4Q14624 930 aa11.87□□□□□ -0.51
PAPD4-207ENST00000504233 RCOR2Q8IZ40 523 aa11.87□□□□□ -0.51
PAPD4-207ENST00000504233 TMEM35BQ8NCS4 154 aa11.87□□□□□ -0.51
PAPD4-207ENST00000504233 RBM41Q96IZ5 413 aaKnown RBP11.87□□□□□ -0.51
PAPD4-207ENST00000504233 DNALI1O14645 258 aaPredicted RBP11.87□□□□□ -0.51
PAPD4-207ENST00000504233 FAM189A1O60320 539 aa11.87□□□□□ -0.51
PAPD4-207ENST00000504233 TOM1L1O75674 476 aa11.87□□□□□ -0.51
PAPD4-207ENST00000504233 CD48P09326 243 aa11.87□□□□□ -0.51
PAPD4-207ENST00000504233 KRT15P19012 456 aa11.87□□□□□ -0.51
PAPD4-207ENST00000504233 CLCN3P51790 818 aa11.87□□□□□ -0.51
PAPD4-207ENST00000504233 GDF10P55107 478 aa11.87□□□□□ -0.51
PAPD4-207ENST00000504233 IGBP1P78318 339 aa11.87□□□□□ -0.51
PAPD4-207ENST00000504233 LACTBP83111 547 aaPredicted RBP11.87□□□□□ -0.51
PAPD4-207ENST00000504233 VGLL4Q14135 290 aa11.87□□□□□ -0.51
PAPD4-207ENST00000504233 EFTUD2Q15029 972 aaKnown RBP eCLIP11.87□□□□□ -0.514e-8■■■■■ 27.7
PAPD4-207ENST00000504233 PKN2Q16513 984 aaKnown RBP11.87□□□□□ -0.51
PAPD4-207ENST00000504233 DUOXA2Q1HG44 320 aa11.87□□□□□ -0.51
PAPD4-207ENST00000504233 WDR72Q3MJ13 1102 aa11.87□□□□□ -0.51
PAPD4-207ENST00000504233 PTPN20Q4JDL3 420 aa11.87□□□□□ -0.51
PAPD4-207ENST00000504233 WDR49Q8IV35 697 aa11.87□□□□□ -0.51
PAPD4-207ENST00000504233 ZCCHC9Q8N567 271 aaKnown RBP11.87□□□□□ -0.51
PAPD4-207ENST00000504233 CKAP2Q8WWK9 683 aa11.87□□□□□ -0.51
PAPD4-207ENST00000504233 RMDN2Q96LZ7 410 aa11.87□□□□□ -0.51
PAPD4-207ENST00000504233 ACO2Q99798 780 aaKnown RBP11.87□□□□□ -0.51
PAPD4-207ENST00000504233 CCDC77Q9BR77 488 aa11.87□□□□□ -0.51
PAPD4-207ENST00000504233 DLGAP2Q9P1A6 1054 aa11.87□□□□□ -0.51
PAPD4-207ENST00000504233 CYTH4Q9UIA0 394 aa11.87□□□□□ -0.51
PAPD4-207ENST00000504233 CNTN6Q9UQ52 1028 aa11.87□□□□□ -0.51
PAPD4-207ENST00000504233 NOP56O00567 594 aaKnown RBP11.86□□□□□ -0.51
PAPD4-207ENST00000504233 CALB1P05937 261 aa11.86□□□□□ -0.51
PAPD4-207ENST00000504233 CXCL8P10145 99 aa11.86□□□□□ -0.51
PAPD4-207ENST00000504233 IL1R2P27930 398 aa11.86□□□□□ -0.51
PAPD4-207ENST00000504233 ICAM3P32942 547 aa11.86□□□□□ -0.51
PAPD4-207ENST00000504233 BAG6P46379 1132 aa11.86□□□□□ -0.51
PAPD4-207ENST00000504233 PDIA2Q13087 525 aaKnown RBP11.86□□□□□ -0.51
PAPD4-207ENST00000504233 TAF5Q15542 800 aa11.86□□□□□ -0.51
PAPD4-207ENST00000504233 MAPK6Q16659 721 aa11.86□□□□□ -0.51
PAPD4-207ENST00000504233 SPATA21Q7Z572 469 aa11.86□□□□□ -0.51
PAPD4-207ENST00000504233 PAPOLBQ9NRJ5 636 aaKnown RBP11.86□□□□□ -0.51
PAPD4-207ENST00000504233 HMGXB4Q9UGU5 601 aa11.86□□□□□ -0.51
PAPD4-207ENST00000504233 POLR2AP24928 1970 aaKnown RBP11.86□□□□□ -0.51
PAPD4-207ENST00000504233 hCG_1818297A0A087WSY0 165 aa11.86□□□□□ -0.51
PAPD4-207ENST00000504233 IGKV6D-21A0A0A0MT36 114 aa11.86□□□□□ -0.51
PAPD4-207ENST00000504233 OGTO15294 1046 aa11.86□□□□□ -0.51
PAPD4-207ENST00000504233 MAFO75444 373 aaPredicted RBP11.86□□□□□ -0.51
PAPD4-207ENST00000504233 GHRP10912 638 aa11.86□□□□□ -0.51
PAPD4-207ENST00000504233 GCAP28676 217 aa11.86□□□□□ -0.51
PAPD4-207ENST00000504233 XRCC4Q13426 336 aa11.86□□□□□ -0.51
PAPD4-207ENST00000504233 PPP1R15BQ5SWA1 713 aa11.86□□□□□ -0.51
PAPD4-207ENST00000504233 ANKRD22Q5VYY1 191 aa11.86□□□□□ -0.51
PAPD4-207ENST00000504233 FAM160B1Q5W0V3 765 aa11.86□□□□□ -0.51
PAPD4-207ENST00000504233 CGB2Q6NT52 195 aa11.86□□□□□ -0.51
PAPD4-207ENST00000504233 SLC30A9Q6PML9 568 aa11.86□□□□□ -0.51
PAPD4-207ENST00000504233 APOBEC3FQ8IUX4 373 aaKnown RBP11.86□□□□□ -0.51
PAPD4-207ENST00000504233 ALLCQ8N6M5 410 aa11.86□□□□□ -0.51
PAPD4-207ENST00000504233 UBR7Q8N806 425 aa11.86□□□□□ -0.51
PAPD4-207ENST00000504233 BBOF1Q8ND07 529 aa11.86□□□□□ -0.51
PAPD4-207ENST00000504233 DNERQ8NFT8 737 aa11.86□□□□□ -0.51
PAPD4-207ENST00000504233 UCMAQ8WVF2 138 aa11.86□□□□□ -0.51
PAPD4-207ENST00000504233 SEPT1Q8WYJ6 367 aa11.86□□□□□ -0.51
PAPD4-207ENST00000504233 OCEL1Q9H607 264 aa11.86□□□□□ -0.51
PAPD4-207ENST00000504233 TMEM134Q9H6X4 195 aa11.86□□□□□ -0.51
PAPD4-207ENST00000504233 SYNCQ9H7C4 482 aa11.86□□□□□ -0.51
PAPD4-207ENST00000504233 NOP53Q9NZM5 478 aaKnown RBP11.86□□□□□ -0.51
PAPD4-207ENST00000504233 SLC12A4Q9UP95 1085 aa11.86□□□□□ -0.51
PAPD4-207ENST00000504233 SSC5DA1L4H1 1573 aa11.85□□□□□ -0.51
PAPD4-207ENST00000504233 MGRN1O60291 552 aa11.85□□□□□ -0.51
PAPD4-207ENST00000504233 SUN1O94901 812 aa11.85□□□□□ -0.51
PAPD4-207ENST00000504233 CDKN2BP42772 138 aa11.85□□□□□ -0.51
PAPD4-207ENST00000504233 WDR4P57081 412 aaKnown RBP11.85□□□□□ -0.51
PAPD4-207ENST00000504233 ENPEPQ07075 957 aa11.85□□□□□ -0.51
PAPD4-207ENST00000504233 DNAJC3Q13217 504 aa11.85□□□□□ -0.51
PAPD4-207ENST00000504233 STAT4Q14765 748 aa11.85□□□□□ -0.51
PAPD4-207ENST00000504233 TFDP3Q5H9I0 405 aa11.85□□□□□ -0.51
PAPD4-207ENST00000504233 FBXO16Q8IX29 292 aaPredicted RBP11.85□□□□□ -0.51
PAPD4-207ENST00000504233 KIAA0319LQ8IZA0 1049 aa11.85□□□□□ -0.51
PAPD4-207ENST00000504233 CHST13Q8NET6 341 aa11.85□□□□□ -0.51
PAPD4-207ENST00000504233 ACTL9Q8TC94 416 aa11.85□□□□□ -0.51
PAPD4-207ENST00000504233 DTX3LQ8TDB6 740 aa11.85□□□□□ -0.51
PAPD4-207ENST00000504233 SLCO1B3Q9NPD5 702 aa11.85□□□□□ -0.51
PAPD4-207ENST00000504233 A0A1W2PPM1 405 aa11.85□□□□□ -0.51
PAPD4-207ENST00000504233 TCRBV5S1A1TA0A578 114 aa11.85□□□□□ -0.51
PAPD4-207ENST00000504233 FZD9O00144 591 aa11.85□□□□□ -0.51
PAPD4-207ENST00000504233 CST8O60676 142 aa11.85□□□□□ -0.51
PAPD4-207ENST00000504233 DNAJC8O75937 253 aaPredicted RBP11.85□□□□□ -0.51
PAPD4-207ENST00000504233 SMNDC1O75940 238 aaKnown RBP eCLIP11.85□□□□□ -0.51
PAPD4-207ENST00000504233 HOXC6P09630 235 aa11.85□□□□□ -0.51
PAPD4-207ENST00000504233 SSTR1P30872 391 aa11.85□□□□□ -0.51
PAPD4-207ENST00000504233 ABCD1P33897 745 aa11.85□□□□□ -0.51
PAPD4-207ENST00000504233 ASPAP45381 313 aa11.85□□□□□ -0.51
PAPD4-207ENST00000504233 RAB27AP51159 221 aa11.85□□□□□ -0.51
PAPD4-207ENST00000504233 VCPP55072 806 aaKnown RBP11.85□□□□□ -0.51
PAPD4-207ENST00000504233 PSMC1P62191 440 aaKnown RBP11.85□□□□□ -0.51
PAPD4-207ENST00000504233 OTUD4Q01804 1114 aaKnown RBP11.85□□□□□ -0.51
PAPD4-207ENST00000504233 LAMB3Q13751 1172 aa11.85□□□□□ -0.51
PAPD4-207ENST00000504233 SGSM1Q2NKQ1 1148 aa11.85□□□□□ -0.51
PAPD4-207ENST00000504233 ZPBP2Q6X784 338 aa11.85□□□□□ -0.51
PAPD4-207ENST00000504233 LBX2Q6XYB7 198 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms