RNA–Protein interactions for RNA: ENST00000504223.1

SH3TC1-208, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 3

Gene SH3TC1, Length 698 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-208ENST00000504223 TACC1O75410 805 aa19.26■□□□□ 0.67
SH3TC1-208ENST00000504223 PDGFRBP09619 1106 aa19.26■□□□□ 0.67
SH3TC1-208ENST00000504223 PCSK1P29120 753 aa19.26■□□□□ 0.67
SH3TC1-208ENST00000504223 CYP4F8P98187 520 aa19.26■□□□□ 0.67
SH3TC1-208ENST00000504223 BIRC3Q13489 604 aa19.26■□□□□ 0.67
SH3TC1-208ENST00000504223 DDR2Q16832 855 aa19.26■□□□□ 0.67
SH3TC1-208ENST00000504223 ZACNQ401N2 412 aa19.26■□□□□ 0.67
SH3TC1-208ENST00000504223 TPRG1Q6ZUI0 275 aa19.26■□□□□ 0.67
SH3TC1-208ENST00000504223 GPIHBP1Q8IV16 184 aa19.26■□□□□ 0.67
SH3TC1-208ENST00000504223 TMC2Q8TDI7 906 aa19.26■□□□□ 0.67
SH3TC1-208ENST00000504223 MYLPFQ96A32 169 aa19.26■□□□□ 0.67
SH3TC1-208ENST00000504223 E2F7Q96AV8 911 aa19.26■□□□□ 0.67
SH3TC1-208ENST00000504223 TIGD1Q96MW7 591 aa19.26■□□□□ 0.67
SH3TC1-208ENST00000504223 OSBPL6Q9BZF3 934 aa19.26■□□□□ 0.67
SH3TC1-208ENST00000504223 SDCBP2Q9H190 292 aa19.26■□□□□ 0.67
SH3TC1-208ENST00000504223 SMYD3Q9H7B4 428 aa19.26■□□□□ 0.67
SH3TC1-208ENST00000504223 VRTNQ9H8Y1 702 aa19.26■□□□□ 0.67
SH3TC1-208ENST00000504223 LTB4R2Q9NPC1 389 aa19.26■□□□□ 0.67
SH3TC1-208ENST00000504223 CACNA1IQ9P0X4 2223 aa19.26■□□□□ 0.67
SH3TC1-208ENST00000504223 ZNF638Q14966 1978 aaKnown RBP19.26■□□□□ 0.67
SH3TC1-208ENST00000504223 TRIM49P0CI25 452 aa19.25■□□□□ 0.67
SH3TC1-208ENST00000504223 TRIM49CP0CI26 452 aa19.25■□□□□ 0.67
SH3TC1-208ENST00000504223 CD72P21854 359 aa19.25■□□□□ 0.67
SH3TC1-208ENST00000504223 WEE1P30291 646 aa19.25■□□□□ 0.67
SH3TC1-208ENST00000504223 CDC25CP30307 473 aa19.25■□□□□ 0.67
SH3TC1-208ENST00000504223 GDI1P31150 447 aa19.25■□□□□ 0.67
SH3TC1-208ENST00000504223 PRCPP42785 496 aa19.25■□□□□ 0.67
SH3TC1-208ENST00000504223 RAP1GAPP47736 663 aa19.25■□□□□ 0.67
SH3TC1-208ENST00000504223 FCHO2Q0JRZ9 810 aa19.25■□□□□ 0.67
SH3TC1-208ENST00000504223 TRPC3Q13507 836 aa19.25■□□□□ 0.67
SH3TC1-208ENST00000504223 NCOA4Q13772 614 aa19.25■□□□□ 0.67
SH3TC1-208ENST00000504223 CFAP221Q4G0U5 840 aa19.25■□□□□ 0.67
SH3TC1-208ENST00000504223 GPR158Q5T848 1215 aa19.25■□□□□ 0.67
SH3TC1-208ENST00000504223 SV2AQ7L0J3 742 aa19.25■□□□□ 0.67
SH3TC1-208ENST00000504223 ARID3BQ8IVW6 561 aaPredicted RBP19.25■□□□□ 0.67
SH3TC1-208ENST00000504223 IRF7Q92985 503 aa19.25■□□□□ 0.67
SH3TC1-208ENST00000504223 EEF2KMTQ96G04 330 aa19.25■□□□□ 0.67
SH3TC1-208ENST00000504223 LRRC3BQ96PB8 259 aa19.25■□□□□ 0.67
SH3TC1-208ENST00000504223 DPEP3Q9H4B8 488 aa19.25■□□□□ 0.67
SH3TC1-208ENST00000504223 NXF1Q9UBU9 619 aaKnown RBP19.25■□□□□ 0.67
SH3TC1-208ENST00000504223 CDH9Q9ULB4 789 aa19.25■□□□□ 0.67
SH3TC1-208ENST00000504223 MIA3Q5JRA6 1907 aa19.25■□□□□ 0.67
SH3TC1-208ENST00000504223 KIF26AQ9ULI4 1882 aaPredicted RBP19.24■□□□□ 0.67
SH3TC1-208ENST00000504223 MAPK13O15264 365 aa19.24■□□□□ 0.67
SH3TC1-208ENST00000504223 PHACTR2O75167 634 aa19.24■□□□□ 0.67
SH3TC1-208ENST00000504223 TADA3O75528 432 aa19.24■□□□□ 0.67
SH3TC1-208ENST00000504223 KIF20AO95235 890 aa19.24■□□□□ 0.67
SH3TC1-208ENST00000504223 F11P03951 625 aa19.24■□□□□ 0.67
SH3TC1-208ENST00000504223 ATICP31939 592 aa19.24■□□□□ 0.67
SH3TC1-208ENST00000504223 PMS1P54277 932 aaKnown RBP19.24■□□□□ 0.67
SH3TC1-208ENST00000504223 CDH8P55286 799 aa19.24■□□□□ 0.67
SH3TC1-208ENST00000504223 PPP3CAQ08209 521 aa19.24■□□□□ 0.67
SH3TC1-208ENST00000504223 UBXN2BQ14CS0 331 aa19.24■□□□□ 0.67
SH3TC1-208ENST00000504223 ZNF699Q32M78 642 aa19.24■□□□□ 0.67
SH3TC1-208ENST00000504223 ARHGAP15Q53QZ3 475 aa19.24■□□□□ 0.67
SH3TC1-208ENST00000504223 ZNF687Q8N1G0 1237 aa19.24■□□□□ 0.67
SH3TC1-208ENST00000504223 SYAP1Q96A49 352 aaPredicted RBP19.24■□□□□ 0.67
SH3TC1-208ENST00000504223 FUBP3Q96I24 572 aaKnown RBP eCLIP19.24■□□□□ 0.67
SH3TC1-208ENST00000504223 TASP1Q9H6P5 420 aa19.24■□□□□ 0.67
SH3TC1-208ENST00000504223 TMEM30AQ9NV96 361 aa19.24■□□□□ 0.67
SH3TC1-208ENST00000504223 WDR87Q6ZQQ6 2873 aa19.23■□□□□ 0.67
SH3TC1-208ENST00000504223 FAM170BA6NMN3 283 aa19.23■□□□□ 0.67
SH3TC1-208ENST00000504223 PRAMEF12O95522 483 aa19.23■□□□□ 0.67
SH3TC1-208ENST00000504223 TARSP26639 723 aaKnown RBP19.23■□□□□ 0.67
SH3TC1-208ENST00000504223 GNL1P36915 607 aaPredicted RBP19.23■□□□□ 0.67
SH3TC1-208ENST00000504223 VAMP7P51809 220 aa19.23■□□□□ 0.67
SH3TC1-208ENST00000504223 AP3M2P53677 418 aa19.23■□□□□ 0.67
SH3TC1-208ENST00000504223 NLRP12P59046 1061 aa19.23■□□□□ 0.67
SH3TC1-208ENST00000504223 MCCD1P59942 119 aaPredicted RBP19.23■□□□□ 0.67
SH3TC1-208ENST00000504223 RPL10AP62906 217 aaKnown RBP19.23■□□□□ 0.67
SH3TC1-208ENST00000504223 TNNC1P63316 161 aa19.23■□□□□ 0.67
SH3TC1-208ENST00000504223 ADAM9Q13443 819 aa19.23■□□□□ 0.67
SH3TC1-208ENST00000504223 FZD5Q13467 585 aa19.23■□□□□ 0.67
SH3TC1-208ENST00000504223 TAF12Q16514 161 aa19.23■□□□□ 0.67
SH3TC1-208ENST00000504223 MDH1BQ5I0G3 518 aa19.23■□□□□ 0.67
SH3TC1-208ENST00000504223 ZNF658Q5TYW1 1059 aaPredicted RBP19.23■□□□□ 0.67
SH3TC1-208ENST00000504223 SPOPLQ6IQ16 392 aa19.23■□□□□ 0.67
SH3TC1-208ENST00000504223 SCARA5Q6ZMJ2 495 aa19.23■□□□□ 0.67
SH3TC1-208ENST00000504223 ZNF852Q6ZMS4 543 aa19.23■□□□□ 0.67
SH3TC1-208ENST00000504223 SPATA2LQ8IUW3 424 aaPredicted RBP19.23■□□□□ 0.67
SH3TC1-208ENST00000504223 FAM186BQ8IYM0 893 aa19.23■□□□□ 0.67
SH3TC1-208ENST00000504223 OR6B3Q8NGW1 331 aa19.23■□□□□ 0.67
SH3TC1-208ENST00000504223 PCED1BQ96HM7 432 aa19.23■□□□□ 0.67
SH3TC1-208ENST00000504223 GSDMAQ96QA5 445 aa19.23■□□□□ 0.67
SH3TC1-208ENST00000504223 GCNAQ96QF7 691 aa19.23■□□□□ 0.67
SH3TC1-208ENST00000504223 SLC46A2Q9BY10 475 aa19.23■□□□□ 0.67
SH3TC1-208ENST00000504223 OBP2AQ9NY56 170 aa19.23■□□□□ 0.67
SH3TC1-208ENST00000504223 FRMD4BQ9Y2L6 1034 aa19.23■□□□□ 0.67
SH3TC1-208ENST00000504223 SLC38A8A6NNN8 435 aa19.22■□□□□ 0.67
SH3TC1-208ENST00000504223 ZNF263O14978 683 aa19.22■□□□□ 0.67
SH3TC1-208ENST00000504223 CHADO15335 359 aa19.22■□□□□ 0.67
SH3TC1-208ENST00000504223 NOL4O94818 638 aa19.22■□□□□ 0.67
SH3TC1-208ENST00000504223 HLA-DRAP01903 254 aa19.22■□□□□ 0.67
SH3TC1-208ENST00000504223 BDNFP23560 247 aa19.22■□□□□ 0.67
SH3TC1-208ENST00000504223 MAGEA11P43364 429 aa19.22■□□□□ 0.67
SH3TC1-208ENST00000504223 GCLMP48507 274 aa19.22■□□□□ 0.67
SH3TC1-208ENST00000504223 CACNA2D1P54289 1103 aa19.22■□□□□ 0.67
SH3TC1-208ENST00000504223 EDRF1Q3B7T1 1238 aa19.22■□□□□ 0.67
SH3TC1-208ENST00000504223 COBLL1Q53SF7 1204 aa19.22■□□□□ 0.67
SH3TC1-208ENST00000504223 FRMD5Q7Z6J6 570 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms