RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 A0A0G2JMP0 313 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 hCG_2039718K7EN88 272 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 SUN1O94901 812 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 MTHFD1P11586 935 aaKnown RBP3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 TM4SF1P30408 202 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 MSH2P43246 934 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 TRAPPC10P48553 1259 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 MXI1P50539 228 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 PPP2R2BQ00005 443 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 GUCY1A3Q02108 690 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 CHRNDQ07001 517 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 SLC12A1Q13621 1099 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 SPIDRQ14159 915 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 KCNJ8Q15842 424 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 MFSD14BQ5SR56 506 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 KDM7AQ6ZMT4 941 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 C4orf50Q6ZRC1 276 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 LRP10Q7Z4F1 713 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 VSTM4Q8IW00 320 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 CRYBG2Q8N1P7 616 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 TTLL6Q8N841 843 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 SLC44A1Q8WWI5 657 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 DYNLL2Q96FJ2 89 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 DYDC2Q96IM9 177 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 RPGRIP1Q96KN7 1286 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 TOX2Q96NM4 488 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 MMS19Q96T76 1030 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 HEMGNQ9BXL5 484 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 CARD9Q9H257 536 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 EPB41L1Q9H4G0 881 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 NHEJ1Q9H9Q4 299 aaPredicted RBP3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 SPC25Q9HBM1 224 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 RIC8AQ9NPQ8 531 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 MOSPD1Q9UJG1 213 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 GGA1Q9UJY5 639 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 SYNGAP1Q96PV0 1343 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 GOLGA8IPA6NC78 632 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 WTIPA6NIX2 430 aaPredicted RBP3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 GOLGA8JA6NMD2 632 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 PP2D1A8MPX8 630 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 F5H423 210 aaPredicted RBP3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 GIPC1O14908 333 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 MUSKO15146 869 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 TRAPPC3O43617 180 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 CDK14O94921 469 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 OR5F1O95221 314 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 SLC4A1P02730 911 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 TIMP2P16035 220 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 HNF1BP35680 557 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 GALK1P51570 392 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 C21orf58P58505 322 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 RTP1P59025 263 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 BFSP1Q12934 665 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 STRN3Q13033 797 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 KRT31Q15323 416 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 TAF12Q16514 161 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 WSCD2Q2TBF2 565 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 XKR9Q5GH70 373 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 CEP78Q5JTW2 689 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 ODR4Q5SWX8 454 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 GRTP1Q5TC63 336 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 TTC23LQ6PF05 361 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 KCTD1Q719H9 257 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 NEK8Q86SG6 692 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 ITIH5Q86UX2 942 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 DDX42Q86XP3 938 aaKnown RBP eCLIP3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 SYCE1Q8N0S2 351 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 IQCKQ8N0W5 287 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 ARHGAP24Q8N264 748 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 METTL13Q8N6R0 699 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 GLIS1Q8NBF1 620 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 PDZD8Q8NEN9 1154 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 ASAP3Q8TDY4 903 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 ZNF606Q8WXB4 792 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 GLG1Q92896 1179 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 TTC17Q96AE7 1141 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 CCDC51Q96ER9 411 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 PAWRQ96IZ0 340 aaKnown RBP3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 PPP1R16BQ96T49 567 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 USB1Q9BQ65 265 aaKnown RBP3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 SHCBP1LQ9BZQ2 653 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 FOXP3Q9BZS1 431 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 DNAI2Q9GZS0 605 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 DDX47Q9H0S4 455 aaKnown RBP3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 ALG13Q9NP73 1137 aaKnown RBP3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 ZNF277Q9NRM2 450 aaPredicted RBP3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 PIM2Q9P1W9 311 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 CNOT8Q9UFF9 292 aaKnown RBP3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 DCTN4Q9UJW0 460 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 PPP1R9AQ9ULJ8 1098 aa3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 SCAF8Q9UPN6 1271 aaKnown RBP3.85□□□□□ -1.79
PCDH11X-208ENST00000504220 A0A0X1KG70 313 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 A0A1W2PQ27 194 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 A0A1W2PQ64 194 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 A0A1W2PQD8 194 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 A6NNZ2 444 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 NOTOA8MTQ0 251 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 TMEM114B3SHH9 223 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 GOLGA8MH3BSY2 632 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 H7C0C1 242 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms