RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 ZNF77Q15935 545 aa17.1■□□□□ 0.33
PDLIM7-210ENST00000503827 KYAT1Q16773 422 aa17.1■□□□□ 0.33
PDLIM7-210ENST00000503827 DUOXA1Q1HG43 343 aa17.1■□□□□ 0.33
PDLIM7-210ENST00000503827 EML3Q32P44 896 aa17.1■□□□□ 0.33
PDLIM7-210ENST00000503827 SPATA1Q5VX52 437 aa17.1■□□□□ 0.33
PDLIM7-210ENST00000503827 CEP76Q8TAP6 659 aa17.1■□□□□ 0.33
PDLIM7-210ENST00000503827 WHAMMQ8TF30 809 aa17.1■□□□□ 0.33
PDLIM7-210ENST00000503827 FNBP1Q96RU3 617 aa17.1■□□□□ 0.33
PDLIM7-210ENST00000503827 PILRBQ9UKJ0 227 aa17.1■□□□□ 0.33
PDLIM7-210ENST00000503827 DNM3Q9UQ16 869 aa17.1■□□□□ 0.33
PDLIM7-210ENST00000503827 STK24Q9Y6E0 443 aa17.1■□□□□ 0.33
PDLIM7-210ENST00000503827 ATXN2Q99700 1313 aaKnown RBP17.1■□□□□ 0.33
PDLIM7-210ENST00000503827 GON4LQ3T8J9 2241 aa17.1■□□□□ 0.33
PDLIM7-210ENST00000503827 USP17L7P0C7H9 530 aa17.09■□□□□ 0.33
PDLIM7-210ENST00000503827 TNFSF9P41273 254 aa17.09■□□□□ 0.33
PDLIM7-210ENST00000503827 SMTNP53814 917 aa17.09■□□□□ 0.33
PDLIM7-210ENST00000503827 MRPS21P82921 87 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-210ENST00000503827 MAPK7Q13164 816 aa17.09■□□□□ 0.33
PDLIM7-210ENST00000503827 ZNF174Q15697 407 aa17.09■□□□□ 0.33
PDLIM7-210ENST00000503827 DCP1BQ8IZD4 617 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-210ENST00000503827 HNRNPLLQ8WVV9 542 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-210ENST00000503827 TMEM206Q9H813 350 aa17.09■□□□□ 0.33
PDLIM7-210ENST00000503827 POLMQ9NP87 494 aaPredicted RBP17.09■□□□□ 0.33
PDLIM7-210ENST00000503827 BCCIPQ9P287 314 aaKnown RBP eCLIP17.09■□□□□ 0.33
PDLIM7-210ENST00000503827 UXTQ9UBK9 157 aaPredicted RBP17.09■□□□□ 0.33
PDLIM7-210ENST00000503827 LRWD1Q9UFC0 647 aa17.09■□□□□ 0.33
PDLIM7-210ENST00000503827 TRAV19A0A0A6YYK7 116 aa17.08■□□□□ 0.32
PDLIM7-210ENST00000503827 SFI1A8K8P3 1242 aa17.08■□□□□ 0.32
PDLIM7-210ENST00000503827 E9PMD0 336 aa17.08■□□□□ 0.32
PDLIM7-210ENST00000503827 NFATC1O95644 943 aa17.08■□□□□ 0.32
PDLIM7-210ENST00000503827 CKMP06732 381 aa17.08■□□□□ 0.32
PDLIM7-210ENST00000503827 ITPKAP23677 461 aa17.08■□□□□ 0.32
PDLIM7-210ENST00000503827 FXR2P51116 673 aaKnown RBP eCLIP17.08■□□□□ 0.32
PDLIM7-210ENST00000503827 USP4Q13107 963 aa17.08■□□□□ 0.32
PDLIM7-210ENST00000503827 PEAR1Q5VY43 1037 aaPredicted RBP17.08■□□□□ 0.32
PDLIM7-210ENST00000503827 C9orf57Q5W0N0 161 aa17.08■□□□□ 0.32
PDLIM7-210ENST00000503827 RINT1Q6NUQ1 792 aa17.08■□□□□ 0.32
PDLIM7-210ENST00000503827 TMEM92Q6UXU6 159 aa17.08■□□□□ 0.32
PDLIM7-210ENST00000503827 LRRTM3Q86VH5 581 aa17.08■□□□□ 0.32
PDLIM7-210ENST00000503827 EFCAB13Q8IY85 973 aa17.08■□□□□ 0.32
PDLIM7-210ENST00000503827 MINDY1Q8N5J2 469 aa17.08■□□□□ 0.32
PDLIM7-210ENST00000503827 FRMD1Q8N878 549 aa17.08■□□□□ 0.32
PDLIM7-210ENST00000503827 TMEM161BQ8NDZ6 487 aa17.08■□□□□ 0.32
PDLIM7-210ENST00000503827 SNX29Q8TEQ0 813 aa17.08■□□□□ 0.32
PDLIM7-210ENST00000503827 SPIRE2Q8WWL2 714 aa17.08■□□□□ 0.32
PDLIM7-210ENST00000503827 BICD1Q96G01 975 aa17.08■□□□□ 0.32
PDLIM7-210ENST00000503827 BBC3Q96PG8 261 aaPredicted RBP17.08■□□□□ 0.32
PDLIM7-210ENST00000503827 RUSC1Q9BVN2 902 aa17.08■□□□□ 0.32
PDLIM7-210ENST00000503827 TIPINQ9BVW5 301 aa17.08■□□□□ 0.32
PDLIM7-210ENST00000503827 HAPLN2Q9GZV7 340 aa17.08■□□□□ 0.32
PDLIM7-210ENST00000503827 RPF1Q9H9Y2 349 aaKnown RBP17.08■□□□□ 0.32
PDLIM7-210ENST00000503827 TRPC7Q9HCX4 862 aa17.08■□□□□ 0.32
PDLIM7-210ENST00000503827 FSCN3Q9NQT6 498 aa17.08■□□□□ 0.32
PDLIM7-210ENST00000503827 PCDHB5Q9Y5E4 795 aa17.08■□□□□ 0.32
PDLIM7-210ENST00000503827 PCDH15Q96QU1 1955 aa17.08■□□□□ 0.32
PDLIM7-210ENST00000503827 CYB561D2O14569 222 aa17.07■□□□□ 0.32
PDLIM7-210ENST00000503827 SERPINF2P08697 491 aa17.07■□□□□ 0.32
PDLIM7-210ENST00000503827 MAPTP10636 758 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-210ENST00000503827 OPRD1P41143 372 aa17.07■□□□□ 0.32
PDLIM7-210ENST00000503827 TRIP6Q15654 476 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-210ENST00000503827 C1orf186Q6ZWK4 172 aa17.07■□□□□ 0.32
PDLIM7-210ENST00000503827 CENPQQ7L2Z9 268 aaPredicted RBP17.07■□□□□ 0.32
PDLIM7-210ENST00000503827 RABEPKQ7Z6M1 372 aa17.07■□□□□ 0.32
PDLIM7-210ENST00000503827 CD302Q8IX05 232 aa17.07■□□□□ 0.32
PDLIM7-210ENST00000503827 GLIS3Q8NEA6 775 aa17.07■□□□□ 0.32
PDLIM7-210ENST00000503827 ADAMTS14Q8WXS8 1223 aa17.07■□□□□ 0.32
PDLIM7-210ENST00000503827 FAM212AQ96EL1 285 aa17.07■□□□□ 0.32
PDLIM7-210ENST00000503827 CYP2S1Q96SQ9 504 aa17.07■□□□□ 0.32
PDLIM7-210ENST00000503827 PCDHB9Q9Y5E1 797 aa17.07■□□□□ 0.32
PDLIM7-210ENST00000503827 FREM2Q5SZK8 3169 aa17.06■□□□□ 0.32
PDLIM7-210ENST00000503827 PTPRBP23467 1997 aa17.06■□□□□ 0.32
PDLIM7-210ENST00000503827 PIRO00625 290 aa17.06■□□□□ 0.32
PDLIM7-210ENST00000503827 AP5Z1O43299 807 aa17.06■□□□□ 0.32
PDLIM7-210ENST00000503827 PRPF40AO75400 957 aaKnown RBP17.06■□□□□ 0.32
PDLIM7-210ENST00000503827 CD59P13987 128 aa17.06■□□□□ 0.32
PDLIM7-210ENST00000503827 HNRNPLP14866 589 aaKnown RBP eCLIP17.06■□□□□ 0.32
PDLIM7-210ENST00000503827 PDIA5Q14554 519 aa17.06■□□□□ 0.32
PDLIM7-210ENST00000503827 SAFBQ15424 915 aaKnown RBP eCLIP17.06■□□□□ 0.32
PDLIM7-210ENST00000503827 ENOX2Q16206 610 aaKnown RBP17.06■□□□□ 0.32
PDLIM7-210ENST00000503827 HSF5Q4G112 596 aaPredicted RBP17.06■□□□□ 0.32
PDLIM7-210ENST00000503827 JADE1Q6IE81 842 aa17.06■□□□□ 0.32
PDLIM7-210ENST00000503827 CCNI2Q6ZMN8 369 aaPredicted RBP17.06■□□□□ 0.32
PDLIM7-210ENST00000503827 PGBD3Q8N328 593 aa17.06■□□□□ 0.32
PDLIM7-210ENST00000503827 TXNDC5Q8NBS9 432 aaKnown RBP17.06■□□□□ 0.32
PDLIM7-210ENST00000503827 STKLD1Q8NE28 680 aa17.06■□□□□ 0.32
PDLIM7-210ENST00000503827 SH3RF2Q8TEC5 729 aa17.06■□□□□ 0.32
PDLIM7-210ENST00000503827 LRIG1Q96JA1 1093 aa17.06■□□□□ 0.32
PDLIM7-210ENST00000503827 PYM1Q9BRP8 204 aaKnown RBP17.06■□□□□ 0.32
PDLIM7-210ENST00000503827 RAB34Q9BZG1 259 aa17.06■□□□□ 0.32
PDLIM7-210ENST00000503827 LINC00597Q9H2U6 94 aa17.06■□□□□ 0.32
PDLIM7-210ENST00000503827 SCUBE2Q9NQ36 999 aa17.06■□□□□ 0.32
PDLIM7-210ENST00000503827 LOC400499M0QZD8 3231 aa17.05■□□□□ 0.32
PDLIM7-210ENST00000503827 ANTXRLA6NF34 631 aa17.05■□□□□ 0.32
PDLIM7-210ENST00000503827 ARHGAP33O14559 1287 aa17.05■□□□□ 0.32
PDLIM7-210ENST00000503827 TADA3O75528 432 aa17.05■□□□□ 0.32
PDLIM7-210ENST00000503827 KLF8O95600 359 aaPredicted RBP17.05■□□□□ 0.32
PDLIM7-210ENST00000503827 ADRB2P07550 413 aa17.05■□□□□ 0.32
PDLIM7-210ENST00000503827 PLS3P13797 630 aa17.05■□□□□ 0.32
PDLIM7-210ENST00000503827 GUCY2CP25092 1073 aa17.05■□□□□ 0.32
PDLIM7-210ENST00000503827 GPR15P49685 360 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms