RNA–Protein interactions for RNA: ENST00000503255.5

GYPB-203, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-203ENST00000503255 GLG1Q92896 1179 aa4.51□□□□□ -1.69
GYPB-203ENST00000503255 RITA1Q96K30 269 aa4.51□□□□□ -1.69
GYPB-203ENST00000503255 SLC46A1Q96NT5 459 aa4.51□□□□□ -1.69
GYPB-203ENST00000503255 BRINP2Q9C0B6 783 aa4.51□□□□□ -1.69
GYPB-203ENST00000503255 PUS7LQ9H0K6 701 aaKnown RBP4.51□□□□□ -1.69
GYPB-203ENST00000503255 WDR17Q8IZU2 1322 aa4.5□□□□□ -1.69
GYPB-203ENST00000503255 CNTNAP2Q9UHC6 1331 aa4.5□□□□□ -1.69
GYPB-203ENST00000503255 CCDC187A0A096LP49 1063 aa4.5□□□□□ -1.69
GYPB-203ENST00000503255 SOAT2O75908 522 aa4.5□□□□□ -1.69
GYPB-203ENST00000503255 TCF15Q12870 199 aa4.5□□□□□ -1.69
GYPB-203ENST00000503255 PXDC1Q5TGL8 231 aa4.5□□□□□ -1.69
GYPB-203ENST00000503255 ICE2Q659A1 982 aa4.5□□□□□ -1.69
GYPB-203ENST00000503255 PPP1R3BQ86XI6 285 aa4.5□□□□□ -1.69
GYPB-203ENST00000503255 PCSK9Q8NBP7 692 aaKnown RBP4.5□□□□□ -1.69
GYPB-203ENST00000503255 C3orf20Q8ND61 904 aa4.5□□□□□ -1.69
GYPB-203ENST00000503255 ADAMTS15Q8TE58 950 aa4.5□□□□□ -1.69
GYPB-203ENST00000503255 R3HDM4Q96D70 268 aa4.5□□□□□ -1.69
GYPB-203ENST00000503255 EBF3Q9H4W6 596 aa4.5□□□□□ -1.69
GYPB-203ENST00000503255 GNL3LQ9NVN8 582 aaKnown RBP4.5□□□□□ -1.69
GYPB-203ENST00000503255 RLIMQ9NVW2 624 aa4.5□□□□□ -1.69
GYPB-203ENST00000503255 TRNAU1APQ9NX07 287 aaKnown RBP4.5□□□□□ -1.69
GYPB-203ENST00000503255 ABCF2Q9UG63 623 aa4.5□□□□□ -1.69
GYPB-203ENST00000503255 CCNL1Q9UK58 526 aaPredicted RBP4.5□□□□□ -1.69
GYPB-203ENST00000503255 TRHDEQ9UKU6 1024 aa4.5□□□□□ -1.69
GYPB-203ENST00000503255 ADAMTS5Q9UNA0 930 aa4.5□□□□□ -1.69
GYPB-203ENST00000503255 PCDHA1Q9Y5I3 950 aa4.5□□□□□ -1.69
GYPB-203ENST00000503255 CFAP20Q9Y6A4 193 aaKnown RBP4.5□□□□□ -1.69
GYPB-203ENST00000503255 INSIG1O15503 277 aa4.49□□□□□ -1.69
GYPB-203ENST00000503255 EXOC3O60645 756 aa4.49□□□□□ -1.69
GYPB-203ENST00000503255 RPLP2P05387 115 aaKnown RBP4.49□□□□□ -1.69
GYPB-203ENST00000503255 TRIP6Q15654 476 aaKnown RBP4.49□□□□□ -1.69
GYPB-203ENST00000503255 PTPROQ16827 1216 aa4.49□□□□□ -1.69
GYPB-203ENST00000503255 ARHGAP40Q5TG30 622 aa4.49□□□□□ -1.69
GYPB-203ENST00000503255 PARS2Q7L3T8 475 aaKnown RBP4.49□□□□□ -1.69
GYPB-203ENST00000503255 WDR53Q7Z5U6 358 aaPredicted RBP4.49□□□□□ -1.69
GYPB-203ENST00000503255 XAGE5Q8WWM1 108 aa4.49□□□□□ -1.69
GYPB-203ENST00000503255 ZC3H10Q96K80 434 aaKnown RBP4.49□□□□□ -1.69
GYPB-203ENST00000503255 FSD1LQ9BXM9 530 aa4.49□□□□□ -1.69
GYPB-203ENST00000503255 MRPL46Q9H2W6 279 aaKnown RBP4.49□□□□□ -1.69
GYPB-203ENST00000503255 COL4A3BPQ9Y5P4 624 aa4.49□□□□□ -1.69
GYPB-203ENST00000503255 A1L4Q6 167 aa4.48□□□□□ -1.69
GYPB-203ENST00000503255 hCG_1984214I3L0E3 225 aa4.48□□□□□ -1.69
GYPB-203ENST00000503255 ADAM10O14672 748 aa4.48□□□□□ -1.69
GYPB-203ENST00000503255 TLR5O60602 858 aa4.48□□□□□ -1.69
GYPB-203ENST00000503255 BCAR3O75815 825 aa4.48□□□□□ -1.69
GYPB-203ENST00000503255 LILRA4P59901 499 aa4.48□□□□□ -1.69
GYPB-203ENST00000503255 TEDDM1Q5T9Z0 273 aa4.48□□□□□ -1.69
GYPB-203ENST00000503255 SYDE2Q5VT97 1194 aa4.48□□□□□ -1.69
GYPB-203ENST00000503255 FAM160B1Q5W0V3 765 aa4.48□□□□□ -1.69
GYPB-203ENST00000503255 TRIM72Q6ZMU5 477 aa4.48□□□□□ -1.69
GYPB-203ENST00000503255 HEATR3Q7Z4Q2 680 aa4.48□□□□□ -1.69
GYPB-203ENST00000503255 ZNF804AQ7Z570 1209 aa4.48□□□□□ -1.69
GYPB-203ENST00000503255 ZDHHC17Q8IUH5 632 aa4.48□□□□□ -1.69
GYPB-203ENST00000503255 PRSS3P2Q8NHM4 247 aa4.48□□□□□ -1.69
GYPB-203ENST00000503255 ATG4AQ8WYN0 398 aa4.48□□□□□ -1.69
GYPB-203ENST00000503255 NELL2Q99435 816 aa4.48□□□□□ -1.69
GYPB-203ENST00000503255 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.48□□□□□ -1.69
GYPB-203ENST00000503255 MRPS17Q9Y2R5 130 aaKnown RBP4.48□□□□□ -1.69
GYPB-203ENST00000503255 CACNA1IQ9P0X4 2223 aa4.48□□□□□ -1.69
GYPB-203ENST00000503255 hCG_2014768A0A024R1R8 64 aa4.47□□□□□ -1.69
GYPB-203ENST00000503255 FCHO1O14526 889 aa4.47□□□□□ -1.69
GYPB-203ENST00000503255 NPSP0C0P6 89 aa4.47□□□□□ -1.69
GYPB-203ENST00000503255 CYP2A6P11509 494 aaPredicted RBP4.47□□□□□ -1.69
GYPB-203ENST00000503255 HDCP19113 662 aa4.47□□□□□ -1.69
GYPB-203ENST00000503255 ATP5F1P24539 256 aaPredicted RBP4.47□□□□□ -1.69
GYPB-203ENST00000503255 ALDH5A1P51649 535 aaPredicted RBP4.47□□□□□ -1.69
GYPB-203ENST00000503255 ANAPC15P60006 121 aa4.47□□□□□ -1.69
GYPB-203ENST00000503255 EXOSC9Q06265 439 aaKnown RBP4.47□□□□□ -1.69
GYPB-203ENST00000503255 ITKQ08881 620 aa4.47□□□□□ -1.69
GYPB-203ENST00000503255 NOGQ13253 232 aa4.47□□□□□ -1.69
GYPB-203ENST00000503255 MTMR1Q13613 665 aa4.47□□□□□ -1.69
GYPB-203ENST00000503255 RAPGEF1Q13905 1077 aa4.47□□□□□ -1.69
GYPB-203ENST00000503255 L1TD1Q5T7N2 865 aaKnown RBP4.47□□□□□ -1.69
GYPB-203ENST00000503255 Q6ZWC4 215 aa4.47□□□□□ -1.69
GYPB-203ENST00000503255 PNMA8AQ86V59 439 aaPredicted RBP4.47□□□□□ -1.69
GYPB-203ENST00000503255 KRT73Q86Y46 540 aa4.47□□□□□ -1.69
GYPB-203ENST00000503255 CPA6Q8N4T0 437 aa4.47□□□□□ -1.69
GYPB-203ENST00000503255 LENG8Q96PV6 779 aaPredicted RBP4.47□□□□□ -1.69
GYPB-203ENST00000503255 SIK2Q9H0K1 926 aa4.47□□□□□ -1.69
GYPB-203ENST00000503255 HESX1Q9UBX0 185 aa4.47□□□□□ -1.69
GYPB-203ENST00000503255 NOP58Q9Y2X3 529 aaKnown RBP4.47□□□□□ -1.69
GYPB-203ENST00000503255 MRFAP1Q9Y605 127 aa4.47□□□□□ -1.69
GYPB-203ENST00000503255 E5RJQ4 531 aa4.46□□□□□ -1.7
GYPB-203ENST00000503255 GABRDO14764 452 aa4.46□□□□□ -1.7
GYPB-203ENST00000503255 GNAI2P04899 355 aa4.46□□□□□ -1.7
GYPB-203ENST00000503255 CBSLP0DN79 551 aa4.46□□□□□ -1.7
GYPB-203ENST00000503255 PIM1P11309 404 aaPredicted RBP4.46□□□□□ -1.7
GYPB-203ENST00000503255 FPR3P25089 353 aa4.46□□□□□ -1.7
GYPB-203ENST00000503255 IL1R2P27930 398 aa4.46□□□□□ -1.7
GYPB-203ENST00000503255 CCKARP32238 428 aa4.46□□□□□ -1.7
GYPB-203ENST00000503255 CBSP35520 551 aa4.46□□□□□ -1.7
GYPB-203ENST00000503255 PXNP49023 591 aaPredicted RBP4.46□□□□□ -1.7
GYPB-203ENST00000503255 FXR1P51114 621 aaKnown RBP eCLIP4.46□□□□□ -1.7
GYPB-203ENST00000503255 PLCD1P51178 756 aa4.46□□□□□ -1.7
GYPB-203ENST00000503255 GPSM2P81274 684 aa4.46□□□□□ -1.7
GYPB-203ENST00000503255 LAMB3Q13751 1172 aa4.46□□□□□ -1.7
GYPB-203ENST00000503255 LONRF3Q496Y0 759 aa4.46□□□□□ -1.7
GYPB-203ENST00000503255 EFCAB2Q5VUJ9 269 aa4.46□□□□□ -1.7
GYPB-203ENST00000503255 RGS7BPQ6MZT1 257 aaPredicted RBP4.46□□□□□ -1.7
GYPB-203ENST00000503255 SHC4Q6S5L8 630 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms