RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 GRHL1Q9NZI5 618 aa12.21□□□□□ -0.45
USP46-204ENST00000503060 H0YGN5 161 aa12.21□□□□□ -0.46
USP46-204ENST00000503060 GRM5P41594 1212 aa12.21□□□□□ -0.46
USP46-204ENST00000503060 RPL21P46778 160 aaKnown RBP12.21□□□□□ -0.46
USP46-204ENST00000503060 PLTPP55058 493 aa12.21□□□□□ -0.46
USP46-204ENST00000503060 HUNKP57058 714 aa12.21□□□□□ -0.46
USP46-204ENST00000503060 KIZQ2M2Z5 673 aa12.21□□□□□ -0.46
USP46-204ENST00000503060 PPP1R15BQ5SWA1 713 aa12.21□□□□□ -0.46
USP46-204ENST00000503060 CHPFQ8IZ52 775 aa12.21□□□□□ -0.46
USP46-204ENST00000503060 SLC4A11Q8NBS3 891 aa12.21□□□□□ -0.46
USP46-204ENST00000503060 UBLCP1Q8WVY7 318 aaPredicted RBP12.21□□□□□ -0.46
USP46-204ENST00000503060 SLCO2A1Q92959 643 aa12.21□□□□□ -0.46
USP46-204ENST00000503060 TXLNGYQ9BZA5 131 aa12.21□□□□□ -0.46
USP46-204ENST00000503060 FAM49AQ9H0Q0 323 aaPredicted RBP12.21□□□□□ -0.46
USP46-204ENST00000503060 LHX5Q9H2C1 402 aa12.21□□□□□ -0.46
USP46-204ENST00000503060 LCMT1Q9UIC8 334 aa12.21□□□□□ -0.46
USP46-204ENST00000503060 AGAP1Q9UPQ3 857 aa12.21□□□□□ -0.46
USP46-204ENST00000503060 GNEQ9Y223 722 aaKnown RBP12.21□□□□□ -0.46
USP46-204ENST00000503060 C2CD2Q9Y426 696 aa12.21□□□□□ -0.46
USP46-204ENST00000503060 NFS1Q9Y697 457 aa12.21□□□□□ -0.46
USP46-204ENST00000503060 PASKQ96RG2 1323 aa12.21□□□□□ -0.46
USP46-204ENST00000503060 IGF2BP3O00425 579 aaKnown RBP eCLIP12.2□□□□□ -0.46
USP46-204ENST00000503060 IFRD1O00458 451 aaPredicted RBP12.2□□□□□ -0.46
USP46-204ENST00000503060 CILPO75339 1184 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 F2P00734 622 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 SMIM10L2AP0DMW4 78 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 SMIM10L2BP0DMW5 78 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 P4HA1P13674 534 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 RPL17P18621 184 aaKnown RBP12.2□□□□□ -0.46
USP46-204ENST00000503060 TAP1Q03518 808 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 ZNF252P-AS1Q0IIN9 211 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 DCAF4L1Q3SXM0 396 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 CEP85LQ5SZL2 805 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 RNF187Q5TA31 235 aaPredicted RBP12.2□□□□□ -0.46
USP46-204ENST00000503060 DCUN1D2Q6PH85 259 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 CCDC50Q8IVM0 306 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 C3orf20Q8ND61 904 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 EXD1Q8NHP7 514 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 KAT2BQ92831 832 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 HPDLQ96IR7 371 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 MCEEQ96PE7 176 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 TWNKQ96RR1 684 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 ELOVL4Q9GZR5 314 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 FLRT1Q9NZU1 646 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 PARP2Q9UGN5 583 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 ITGA11Q9UKX5 1188 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 PTPN22Q9Y2R2 807 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 KAT6AQ92794 2004 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 NRCAMQ92823 1304 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 RALAP11233 206 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 GJC1P36383 396 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 RBP5P82980 135 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 PTPN11Q06124 597 aaPredicted RBP12.2□□□□□ -0.46
USP46-204ENST00000503060 TMEM62Q0P6H9 643 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 ORC1Q13415 861 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 SPDYCQ5MJ68 293 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 CYP4A22Q5TCH4 519 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 JAZF1Q86VZ6 243 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 RASAL3Q86YV0 1011 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 FBXO25Q8TCJ0 367 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 GCOM2Q9BZD3 368 aaPredicted RBP12.2□□□□□ -0.46
USP46-204ENST00000503060 TRIM6Q9C030 488 aaPredicted RBP12.2□□□□□ -0.46
USP46-204ENST00000503060 DCLK3Q9C098 648 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 CHST7Q9NS84 486 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 DPP3Q9NY33 737 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 HMGXB4Q9UGU5 601 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 STRIP2Q9ULQ0 834 aa12.2□□□□□ -0.46
USP46-204ENST00000503060 GPR32O75388 356 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 NPTXRO95502 500 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 STAU1O95793 577 aaKnown RBP12.19□□□□□ -0.46
USP46-204ENST00000503060 ZNF865P0CJ78 1059 aaPredicted RBP12.19□□□□□ -0.46
USP46-204ENST00000503060 VAMP1P23763 118 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 CDC42EP1Q00587 391 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 OGDHQ02218 1023 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 KLF1Q13351 362 aaPredicted RBP12.19□□□□□ -0.46
USP46-204ENST00000503060 SNX1Q13596 522 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 PTPN20Q4JDL3 420 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 OLFML2BQ68BL8 750 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 KCTD16Q68DU8 428 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 CATSPER4Q7RTX7 472 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 TLK2Q86UE8 772 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 SH2D3CQ8N5H7 860 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 OR2W6PQ8NHA6 318 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 ATG4AQ8WYN0 398 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 TMEM176AQ96HP8 235 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 HEMGNQ9BXL5 484 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 OSBPL8Q9BZF1 889 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 TMBIM4Q9HC24 238 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 CYTH4Q9UIA0 394 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 GINS2Q9Y248 185 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 ATP8A1Q9Y2Q0 1164 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 TMEM238LA0A1B0GVL6 79 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 SMIM35A0A1B0GVV1 85 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 MBLAC1A4D2B0 266 aaPredicted RBP12.19□□□□□ -0.46
USP46-204ENST00000503060 CYP2C9P11712 490 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 ENPP1P22413 925 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 IL4RP24394 825 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 HOXD10P28358 340 aa12.19□□□□□ -0.46
USP46-204ENST00000503060 HOXA11P31270 313 aaPredicted RBP12.19□□□□□ -0.46
USP46-204ENST00000503060 ZNF844Q08AG5 666 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms