RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 WARSP23381 471 aaKnown RBP23.22■■□□□ 1.31
PTPN13-205ENST00000502971 ZNF252P-AS1Q0IIN9 211 aa23.22■■□□□ 1.31
PTPN13-205ENST00000502971 ZNF618Q5T7W0 954 aa23.22■■□□□ 1.31
PTPN13-205ENST00000502971 AGMOQ6ZNB7 445 aa23.22■■□□□ 1.31
PTPN13-205ENST00000502971 ADAT2Q7Z6V5 191 aaKnown RBP23.22■■□□□ 1.31
PTPN13-205ENST00000502971 PGBD4Q96DM1 585 aa23.22■■□□□ 1.31
PTPN13-205ENST00000502971 RUNDC3BQ96NL0 473 aa23.22■■□□□ 1.31
PTPN13-205ENST00000502971 HINFPQ9BQA5 517 aa23.22■■□□□ 1.31
PTPN13-205ENST00000502971 OSBPL7Q9BZF2 842 aa23.22■■□□□ 1.31
PTPN13-205ENST00000502971 UNC93B1Q9H1C4 597 aa23.22■■□□□ 1.31
PTPN13-205ENST00000502971 HESX1Q9UBX0 185 aa23.22■■□□□ 1.31
PTPN13-205ENST00000502971 TJP2Q9UDY2 1190 aa23.22■■□□□ 1.31
PTPN13-205ENST00000502971 A0A0U1RQF3 1178 aa23.22■■□□□ 1.31
PTPN13-205ENST00000502971 A0A1W2PQ45 241 aaPredicted RBP23.22■■□□□ 1.31
PTPN13-205ENST00000502971 A0A1W2PQY0 241 aa23.22■■□□□ 1.31
PTPN13-205ENST00000502971 ARL5CA6NH57 179 aa23.22■■□□□ 1.31
PTPN13-205ENST00000502971 EPHB4P54760 987 aa23.22■■□□□ 1.31
PTPN13-205ENST00000502971 OGDHQ02218 1023 aa23.22■■□□□ 1.31
PTPN13-205ENST00000502971 DHX34Q14147 1143 aaKnown RBP23.22■■□□□ 1.31
PTPN13-205ENST00000502971 CASP8Q14790 479 aa23.22■■□□□ 1.31
PTPN13-205ENST00000502971 CYP1B1Q16678 543 aa23.22■■□□□ 1.31
PTPN13-205ENST00000502971 PRELID2Q8N945 189 aa23.22■■□□□ 1.31
PTPN13-205ENST00000502971 EXD1Q8NHP7 514 aa23.22■■□□□ 1.31
PTPN13-205ENST00000502971 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.22■■□□□ 1.31
PTPN13-205ENST00000502971 UBN1Q9NPG3 1134 aa23.22■■□□□ 1.31
PTPN13-205ENST00000502971 STARD7Q9NQZ5 370 aa23.22■■□□□ 1.31
PTPN13-205ENST00000502971 MGEA5O60502 916 aa23.21■■□□□ 1.31
PTPN13-205ENST00000502971 CAPN15O75808 1086 aa23.21■■□□□ 1.31
PTPN13-205ENST00000502971 FGFR1P11362 822 aa23.21■■□□□ 1.31
PTPN13-205ENST00000502971 RFC1P35251 1148 aaPredicted RBP23.21■■□□□ 1.31
PTPN13-205ENST00000502971 SSR1P43307 286 aaKnown RBP23.21■■□□□ 1.31
PTPN13-205ENST00000502971 SNX16P57768 344 aa23.21■■□□□ 1.31
PTPN13-205ENST00000502971 EMBQ6PCB8 327 aa23.21■■□□□ 1.31
PTPN13-205ENST00000502971 ADGRF2Q8IZF7 708 aa23.21■■□□□ 1.31
PTPN13-205ENST00000502971 STK32AQ8WU08 396 aa23.21■■□□□ 1.31
PTPN13-205ENST00000502971 LPPQ93052 612 aa23.21■■□□□ 1.31
PTPN13-205ENST00000502971 FAM187AA6NFU0 413 aa23.2■■□□□ 1.3
PTPN13-205ENST00000502971 CKBP12277 381 aa23.2■■□□□ 1.3
PTPN13-205ENST00000502971 RPL9P32969 192 aaKnown RBP23.2■■□□□ 1.3
PTPN13-205ENST00000502971 CUL1Q13616 776 aa23.2■■□□□ 1.3
PTPN13-205ENST00000502971 DAB2IPQ5VWQ8 1189 aa23.2■■□□□ 1.3
PTPN13-205ENST00000502971 GSPT2Q8IYD1 628 aaKnown RBP23.2■■□□□ 1.3
PTPN13-205ENST00000502971 KRT222Q8N1A0 295 aa23.2■■□□□ 1.3
PTPN13-205ENST00000502971 CASKIN2Q8WXE0 1202 aa23.2■■□□□ 1.3
PTPN13-205ENST00000502971 TNIP3Q96KP6 325 aa23.2■■□□□ 1.3
PTPN13-205ENST00000502971 SEZ6LQ9BYH1 1024 aa23.2■■□□□ 1.3
PTPN13-205ENST00000502971 RNF208Q9H0X6 261 aa23.2■■□□□ 1.3
PTPN13-205ENST00000502971 METTL5Q9NRN9 209 aaKnown RBP23.2■■□□□ 1.3
PTPN13-205ENST00000502971 MIOSQ9NXC5 875 aa23.2■■□□□ 1.3
PTPN13-205ENST00000502971 PHF24Q9UPV7 400 aa23.2■■□□□ 1.3
PTPN13-205ENST00000502971 F8VP50 259 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 CYB561D2O14569 222 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 CCL5P13501 91 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 PSMA2P25787 234 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 CETN2P41208 172 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 ACAP1Q15027 740 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 SIX1Q15475 284 aaPredicted RBP23.19■■□□□ 1.3
PTPN13-205ENST00000502971 TTC30AQ86WT1 665 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 ZDHHC14Q8IZN3 488 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 C12orf50Q8NA57 414 aaPredicted RBP23.19■■□□□ 1.3
PTPN13-205ENST00000502971 MAGOHBQ96A72 148 aaKnown RBP23.19■■□□□ 1.3
PTPN13-205ENST00000502971 ARMC5Q96C12 935 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 ADAM2Q99965 735 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 SLC4A5Q9BY07 1137 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 DPEP3Q9H4B8 488 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 VIPAS39Q9H9C1 493 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 RSAD1Q9HA92 442 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 ST7Q9NRC1 585 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 FAM49BQ9NUQ9 324 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 PCYOX1Q9UHG3 505 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 UTP11Q9Y3A2 253 aaKnown RBP23.19■■□□□ 1.3
PTPN13-205ENST00000502971 ZSCAN5CA6NGD5 496 aaPredicted RBP23.19■■□□□ 1.3
PTPN13-205ENST00000502971 SPDYE4A6NLX3 237 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 TTI1O43156 1089 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 PDGFRBP09619 1106 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 RARAP10276 462 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 LMO2P25791 158 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 TNNT3P45378 269 aaPredicted RBP23.19■■□□□ 1.3
PTPN13-205ENST00000502971 CARSP49589 748 aaKnown RBP23.19■■□□□ 1.3
PTPN13-205ENST00000502971 DR1Q01658 176 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 NNTQ13423 1086 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 RCOR2Q8IZ40 523 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 ANKRD52Q8NB46 1076 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 JOSD2Q8TAC2 188 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 SLC35F5Q8WV83 523 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 IFT81Q8WYA0 676 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 SEC14L1Q92503 715 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 CAVIN3Q969G5 261 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 RBM41Q96IZ5 413 aaKnown RBP23.19■■□□□ 1.3
PTPN13-205ENST00000502971 ZNF333Q96JL9 665 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 RAB17Q9H0T7 212 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 TRPV6Q9H1D0 765 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 PLEKHA4Q9H4M7 779 aa23.19■■□□□ 1.3
PTPN13-205ENST00000502971 DDX56Q9NY93 547 aaKnown RBP23.19■■□□□ 1.3
PTPN13-205ENST00000502971 ESYT3A0FGR9 886 aa23.18■■□□□ 1.3
PTPN13-205ENST00000502971 KBTBD13C9JR72 458 aa23.18■■□□□ 1.3
PTPN13-205ENST00000502971 ARVCFO00192 962 aa23.18■■□□□ 1.3
PTPN13-205ENST00000502971 PODXLO00592 558 aa23.18■■□□□ 1.3
PTPN13-205ENST00000502971 PLA2G4AP47712 749 aa23.18■■□□□ 1.3
PTPN13-205ENST00000502971 SCNN1GP51170 649 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms