RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 SV2BQ7L1I2 683 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 PDCL2Q8N4E4 241 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 CPA6Q8N4T0 437 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 MAB21L3Q8N8X9 362 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 C1orf127Q8N9H9 656 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 TMEM174Q8WUU8 243 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 ATP2A3Q93084 1043 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 ACDQ96AP0 544 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 ZFYVE19Q96K21 471 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 CNTNAP3BQ96NU0 1288 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 ACCSQ96QU6 501 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 PLIN2Q99541 437 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 P2RY13Q9BPV8 354 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 TTLL2Q9BWV7 592 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 CNTNAP3Q9BZ76 1288 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 LRRC27Q9C0I9 530 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 MRPL44Q9H9J2 332 aaKnown RBP6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 VPS45Q9NRW7 570 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 RBM12Q9NTZ6 932 aaKnown RBP6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 DDX43Q9NXZ2 648 aaKnown RBP6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 GCNT4Q9P109 453 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 L1RE1Q9UN81 338 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 ARHGAP26Q9UNA1 814 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 SLC8A2Q9UPR5 921 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 SMC3Q9UQE7 1217 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 NCOR2Q9Y618 2525 aa6.56□□□□□ -1.36
LSM3P4-201ENST00000502948 TRAV19A0A0A6YYK7 116 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 OTOL1A6NHN0 477 aaPredicted RBP6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 PRPF40AO75400 957 aaKnown RBP6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 TACC1O75410 805 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 TADA3O75528 432 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 SOAT2O75908 522 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 RHOBTB1O94844 696 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 STAU1O95793 577 aaKnown RBP6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 OLFM2O95897 454 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 ITGB3P05106 788 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 PDIA4P13667 645 aaKnown RBP6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 GALK1P51570 392 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 RBP5P82980 135 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 CYP4F8P98187 520 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 GRIN1Q05586 938 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 MTF1Q14872 753 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 EML3Q32P44 896 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 RRAGBQ5VZM2 374 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 IL31Q6EBC2 164 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 STXBP4Q6ZWJ1 553 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 CEP68Q76N32 757 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 RASSF3Q86WH2 238 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 SFR1Q86XK3 245 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 GPD1LQ8N335 351 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 TMEM130Q8N3G9 435 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 RASSF8Q8NHQ8 419 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 KCNV2Q8TDN2 545 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 CD101Q93033 1021 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 FAM212AQ96EL1 285 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 INTS4Q96HW7 963 aaKnown RBP6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 EPSTI1Q96J88 318 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 C8orf48Q96LL4 319 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 LSM14BQ9BX40 385 aaKnown RBP6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 CUEDC2Q9H467 287 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 EBF3Q9H4W6 596 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 ECT2Q9H8V3 914 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 UPF2Q9HAU5 1272 aaKnown RBP6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 TMLHEQ9NVH6 421 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 INTS13Q9NVM9 706 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 C2orf42Q9NWW7 574 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 ABI2Q9NYB9 513 aaPredicted RBP6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 RBAKQ9NYW8 714 aaPredicted RBP6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 FBXO2Q9UK22 296 aaPredicted RBP6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 CDH9Q9ULB4 789 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 CCL26Q9Y258 94 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 CACNA1BQ00975 2339 aa6.55□□□□□ -1.36
LSM3P4-201ENST00000502948 ATG2BQ96BY7 2078 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 MYMKA6NI61 221 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 TISP43B9A030 160 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 SLC9A3R1O14745 358 aaPredicted RBP6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 TRIM66O15016 1216 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 AXIN1O15169 862 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 EIF3DO15371 548 aaKnown RBP eCLIP6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 RNF40O75150 1001 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 CD2BP2O95400 341 aaKnown RBP6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 NFATC1O95644 943 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 APBB3O95704 486 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 EGFP01133 1207 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 WARSP23381 471 aaKnown RBP6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 POLR2BP30876 1174 aaKnown RBP6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 MPLP40238 635 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 SLC7A9P82251 487 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 MRPS21P82921 87 aaKnown RBP6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 PSMD2Q13200 908 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 DHX8Q14562 1220 aaKnown RBP6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 SLC39A14Q15043 492 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 SOWAHAQ2M3V2 549 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 PLK5Q496M5 336 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 SNX30Q5VWJ9 437 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 TXNDC8Q6A555 127 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 DENND5BQ6ZUT9 1274 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 KBTBD6Q86V97 674 aa6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 SPATA2LQ8IUW3 424 aaPredicted RBP6.54□□□□□ -1.36
LSM3P4-201ENST00000502948 WDR49Q8IV35 697 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms