RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 NEK8Q86SG6 692 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 KIAA1328Q86T90 577 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 CTAGE6Q86UF2 777 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 ARID3BQ8IVW6 561 aaPredicted RBP5.56□□□□□ -1.52
HTT-202ENST00000502820 CTAGE4Q8IX94 777 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 FMR1NBQ8N0W7 255 aaPredicted RBP5.56□□□□□ -1.52
HTT-202ENST00000502820 CAMKK1Q8N5S9 505 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 NECAB1Q8N987 351 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 FAM181AQ8N9Y4 354 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 FAM76AQ8TAV0 307 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 OXER1Q8TDS5 423 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 PRPF31Q8WWY3 499 aaKnown RBP5.56□□□□□ -1.52
HTT-202ENST00000502820 SLC7A3Q8WY07 619 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 RSPRY1Q96DX4 576 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 MSANTD3Q96H12 275 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 DRC1Q96MC2 740 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 FAM20AQ96MK3 541 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 FAM210AQ96ND0 272 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 ANKRD27Q96NW4 1050 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 FCRL3Q96P31 734 aaPredicted RBP5.56□□□□□ -1.52
HTT-202ENST00000502820 BAG1Q99933 345 aaPredicted RBP5.56□□□□□ -1.52
HTT-202ENST00000502820 TEKT3Q9BXF9 490 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 NIFKQ9BYG3 293 aaKnown RBP5.56□□□□□ -1.52
HTT-202ENST00000502820 XPO4Q9C0E2 1151 aaKnown RBP5.56□□□□□ -1.52
HTT-202ENST00000502820 SMG9Q9H0W8 520 aaKnown RBP5.56□□□□□ -1.52
HTT-202ENST00000502820 ATXN3LQ9H3M9 355 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 IFT122Q9HBG6 1241 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 THG1LQ9NWX6 298 aaKnown RBP5.56□□□□□ -1.52
HTT-202ENST00000502820 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.56□□□□□ -1.52
HTT-202ENST00000502820 DDX25Q9UHL0 483 aaKnown RBP5.56□□□□□ -1.52
HTT-202ENST00000502820 GIT1Q9Y2X7 761 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 MIA3Q5JRA6 1907 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 PATJQ8NI35 1801 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 FANCMQ8IYD8 2048 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 ITIH6Q6UXX5 1313 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 CCDC163A0A0D9SF12 145 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 CTAGE9A4FU28 777 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 KLHL33A6NCF5 533 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 FAM205CA6NFA0 338 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 TRABD2BA6NFA1 517 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 WNT7AO00755 349 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 TBX3O15119 743 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 ATXN7O15265 892 aaPredicted RBP5.55□□□□□ -1.52
HTT-202ENST00000502820 OPA1O60313 960 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 JAK2O60674 1132 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 SEC24AO95486 1093 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 C1RP00736 705 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 EPB41P11171 864 aaKnown RBP5.55□□□□□ -1.52
HTT-202ENST00000502820 EZRP15311 586 aaKnown RBP5.55□□□□□ -1.52
HTT-202ENST00000502820 XBP1P17861 261 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 FECHP22830 423 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 IGFBP6P24592 240 aaPredicted RBP5.55□□□□□ -1.52
HTT-202ENST00000502820 TKTP29401 623 aaKnown RBP5.55□□□□□ -1.52
HTT-202ENST00000502820 HOXA6P31267 233 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 PTGER3P43115 390 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 BRCC3P46736 316 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 NPEPPSP55786 919 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 UBASH3AP57075 661 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 GNG11P61952 73 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 FANCCQ00597 558 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 SPIRE1Q08AE8 756 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 LAMTOR4Q0VGL1 99 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 ELAVL2Q12926 359 aaKnown RBP5.55□□□□□ -1.52
HTT-202ENST00000502820 NR5A1Q13285 461 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 TUSC3Q13454 348 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 CASP8Q14790 479 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 ITPRIPL2Q3MIP1 535 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 CCDC38Q502W7 563 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 C2orf27AQ580R0 203 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 XKR3Q5GH77 459 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 GLRA4Q5JXX5 417 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 PRSS36Q5K4E3 855 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 GPR158Q5T848 1215 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 PMS2CLQ68D20 193 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 SPECC1LQ69YQ0 1117 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 TRIM68Q6AZZ1 485 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 LRRC31Q6UY01 552 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 CCNI2Q6ZMN8 369 aaPredicted RBP5.55□□□□□ -1.52
HTT-202ENST00000502820 ZNF662Q6ZS27 426 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 PIK3AP1Q6ZUJ8 805 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 ANO5Q75V66 913 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 LPCAT2Q7L5N7 544 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 PRICKLE2Q7Z3G6 844 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 RAB44Q7Z6P3 723 aaPredicted RBP5.55□□□□□ -1.52
HTT-202ENST00000502820 EGFL6Q8IUX8 553 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 CNGA4Q8IV77 575 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 SYNPOQ8N3V7 929 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 CCDC33Q8N5R6 958 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 TCP11Q8WWU5 503 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 PSPC1Q8WXF1 523 aaKnown RBP5.55□□□□□ -1.52
HTT-202ENST00000502820 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.55□□□□□ -1.52
HTT-202ENST00000502820 WASF1Q92558 559 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 HAS1Q92839 578 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 IQCDQ96DY2 449 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 ERLEC1Q96DZ1 483 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 CEP170P1Q96L14 293 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 PGLYRP2Q96PD5 576 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 NAP1L4Q99733 375 aaKnown RBP5.55□□□□□ -1.52
HTT-202ENST00000502820 CRACR2AQ9BSW2 395 aa5.55□□□□□ -1.52
HTT-202ENST00000502820 EBF3Q9H4W6 596 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms