RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	ANXA13	P27216	316 aa		11.22	□□□□□ -0.61
FXR1-222	ENST00000498658	GABRR2	P28476	465 aa		11.22	□□□□□ -0.61
FXR1-222	ENST00000498658	GCLM	P48507	274 aa		11.22	□□□□□ -0.61
FXR1-222	ENST00000498658	CYP27A1	Q02318	531 aa		11.22	□□□□□ -0.61
FXR1-222	ENST00000498658	MORC3	Q14149	939 aa		11.22	□□□□□ -0.61
FXR1-222	ENST00000498658	ANKRD40	Q6AI12	368 aa		11.22	□□□□□ -0.61
FXR1-222	ENST00000498658	ASTL	Q6HA08	431 aa	Predicted RBP	11.22	□□□□□ -0.61
FXR1-222	ENST00000498658	UNC93A	Q86WB7	457 aa		11.22	□□□□□ -0.61
FXR1-222	ENST00000498658	TTC39C	Q8N584	583 aa		11.22	□□□□□ -0.61
FXR1-222	ENST00000498658	TTC9B	Q8N6N2	239 aa		11.22	□□□□□ -0.61
FXR1-222	ENST00000498658	RSAD2	Q8WXG1	361 aa		11.22	□□□□□ -0.61
FXR1-222	ENST00000498658	ERCC4	Q92889	916 aa	Predicted RBP	11.22	□□□□□ -0.61
FXR1-222	ENST00000498658	TCEAL4	Q96EI5	215 aa		11.22	□□□□□ -0.61
FXR1-222	ENST00000498658	SHD	Q96IW2	340 aa		11.22	□□□□□ -0.61
FXR1-222	ENST00000498658	CEP63	Q96MT8	703 aa		11.22	□□□□□ -0.61
FXR1-222	ENST00000498658	ASB16	Q96NS5	453 aa		11.22	□□□□□ -0.61
FXR1-222	ENST00000498658	DCBLD2	Q96PD2	775 aa		11.22	□□□□□ -0.61
FXR1-222	ENST00000498658	MRPL45	Q9BRJ2	306 aa	Known RBP	11.22	□□□□□ -0.61
FXR1-222	ENST00000498658	LRRC3	Q9BY71	257 aa		11.22	□□□□□ -0.61
FXR1-222	ENST00000498658	ATXN3L	Q9H3M9	355 aa		11.22	□□□□□ -0.61
FXR1-222	ENST00000498658	FAM124B	Q9H5Z6	455 aa	Predicted RBP	11.22	□□□□□ -0.61
FXR1-222	ENST00000498658	CYP3A43	Q9HB55	503 aa		11.22	□□□□□ -0.61
FXR1-222	ENST00000498658	TRPV4	Q9HBA0	871 aa		11.22	□□□□□ -0.61
FXR1-222	ENST00000498658	TMLHE	Q9NVH6	421 aa		11.22	□□□□□ -0.61
FXR1-222	ENST00000498658	KIAA1468	Q9P260	1216 aa		11.22	□□□□□ -0.61
FXR1-222	ENST00000498658	ARMCX3	Q9UH62	379 aa	Predicted RBP	11.22	□□□□□ -0.61
FXR1-222	ENST00000498658	GOLGA6L22	H0YM25	854 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	SOAT2	O75908	522 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	VNN1	O95497	513 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	HLA-DRA	P01903	254 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	TRIM49	P0CI25	452 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	TRIM49C	P0CI26	452 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	PTPN1	P18031	435 aa	Known RBP	11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	CYP2F1	P24903	491 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	WEE1	P30291	646 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	GRIK1	P39086	918 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	CCR2	P41597	374 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	MXI1	P50539	228 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	CLCN5	P51795	746 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	PSMC1	P62191	440 aa	Known RBP	11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	PPP3CA	Q08209	521 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	CETN1	Q12798	172 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	TEAD2	Q15562	447 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	WDR44	Q5JSH3	913 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	FAM78A	Q5JUQ0	283 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	C1orf220	Q5T0J3	134 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	ISM2	Q6H9L7	571 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	FRMD5	Q7Z6J6	570 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	FILIP1	Q7Z7B0	1213 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	SCN4B	Q8IWT1	228 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	B3GALNT2	Q8NCR0	500 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	FBXL13	Q8NEE6	735 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	SHKBP1	Q8TBC3	707 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	GIPC2	Q8TF65	315 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	DEPDC1B	Q8WUY9	529 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	MYLPF	Q96A32	169 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	TRMT2B	Q96GJ1	504 aa	Known RBP	11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	PCED1B	Q96HM7	432 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	SPATA17	Q96L03	361 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	MYRFL	Q96LU7	910 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	IPO9	Q96P70	1041 aa	Known RBP	11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	LPIN3	Q9BQK8	851 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	ELOVL4	Q9GZR5	314 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	CRTAC1	Q9NQ79	661 aa		11.21	□□□□□ -0.61
FXR1-222	ENST00000498658	PPP1R3G	B7ZBB8	358 aa		11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	ATP2C2	O75185	946 aa		11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	MOSPD3	O75425	235 aa		11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	NOL4	O94818	638 aa		11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	CFH	P08603	1231 aa		11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	PSMC3	P17980	439 aa		11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	RFX1	P22670	979 aa		11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	BDNF	P23560	247 aa		11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	PPP3CC	P48454	512 aa		11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	PDE6C	P51160	858 aa		11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	PMS1	P54277	932 aa	Known RBP	11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	NOP14	P78316	857 aa	Known RBP	11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	PAK1	Q13153	545 aa		11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	DDR2	Q16832	855 aa		11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	DCAF17	Q5H9S7	520 aa	Predicted RBP	11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	MDH1B	Q5I0G3	518 aa		11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	GPR158	Q5T848	1215 aa		11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	TCERG1L	Q5VWI1	586 aa		11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	KLHL10	Q6JEL2	608 aa		11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	GAREM2	Q75VX8	874 aa		11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	GPR152	Q8TDT2	470 aa		11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	TAS1R2	Q8TE23	839 aa		11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	NELFB	Q8WX92	580 aa		11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	MRPS31	Q92665	395 aa	Known RBP	11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	DNASE1L2	Q92874	299 aa		11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	IRF7	Q92985	503 aa		11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	EEF2KMT	Q96G04	330 aa		11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	KXD1	Q9BQD3	176 aa		11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	TRMT61B	Q9BVS5	477 aa	Known RBP	11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	NIF3L1	Q9GZT8	377 aa		11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	SMOC2	Q9H3U7	446 aa		11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	TASP1	Q9H6P5	420 aa		11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	SMYD3	Q9H7B4	428 aa		11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	MMRN2	Q9H8L6	949 aa		11.2	□□□□□ -0.62
FXR1-222	ENST00000498658	RAB20	Q9NX57	234 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms