RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 C1QTNF9BB2RNN3 333 aa15.82■□□□□ 0.12
TRAF4-212ENST00000498540 EIF5BO60841 1220 aaKnown RBP15.82■□□□□ 0.12
TRAF4-212ENST00000498540 TBCAO75347 108 aaKnown RBP15.82■□□□□ 0.12
TRAF4-212ENST00000498540 NOL4O94818 638 aa15.82■□□□□ 0.12
TRAF4-212ENST00000498540 RHOBTB1O94844 696 aa15.82■□□□□ 0.12
TRAF4-212ENST00000498540 C1QTNF9P0C862 333 aa15.82■□□□□ 0.12
TRAF4-212ENST00000498540 ACAT1P24752 427 aaKnown RBP15.82■□□□□ 0.12
TRAF4-212ENST00000498540 CYP2F1P24903 491 aa15.82■□□□□ 0.12
TRAF4-212ENST00000498540 TSPY1Q01534 308 aa15.82■□□□□ 0.12
TRAF4-212ENST00000498540 FAM160A1Q05DH4 1040 aa15.82■□□□□ 0.12
TRAF4-212ENST00000498540 PSMD2Q13200 908 aa15.82■□□□□ 0.12
TRAF4-212ENST00000498540 SCARA3Q6AZY7 606 aa15.82■□□□□ 0.12
TRAF4-212ENST00000498540 PDCL2Q8N4E4 241 aa15.82■□□□□ 0.12
TRAF4-212ENST00000498540 LEO1Q8WVC0 666 aaPredicted RBP15.82■□□□□ 0.12
TRAF4-212ENST00000498540 OSCP1Q8WVF1 389 aa15.82■□□□□ 0.12
TRAF4-212ENST00000498540 RAD54LQ92698 747 aa15.82■□□□□ 0.12
TRAF4-212ENST00000498540 ACDQ96AP0 544 aa15.82■□□□□ 0.12
TRAF4-212ENST00000498540 CALML4Q96GE6 196 aa15.82■□□□□ 0.12
TRAF4-212ENST00000498540 AK8Q96MA6 479 aa15.82■□□□□ 0.12
TRAF4-212ENST00000498540 ZNF560Q96MR9 790 aa15.82■□□□□ 0.12
TRAF4-212ENST00000498540 CYP2S1Q96SQ9 504 aa15.82■□□□□ 0.12
TRAF4-212ENST00000498540 L1RE1Q9UN81 338 aa15.82■□□□□ 0.12
TRAF4-212ENST00000498540 PTPRDP23468 1912 aa15.82■□□□□ 0.12
TRAF4-212ENST00000498540 IGF2RP11717 2491 aa15.82■□□□□ 0.12
TRAF4-212ENST00000498540 ZZEF1O43149 2961 aa15.81■□□□□ 0.12
TRAF4-212ENST00000498540 ANTXRLA6NF34 631 aa15.81■□□□□ 0.12
TRAF4-212ENST00000498540 SLC26A4O43511 780 aa15.81■□□□□ 0.12
TRAF4-212ENST00000498540 ADSSP30520 456 aa15.81■□□□□ 0.12
TRAF4-212ENST00000498540 GBP1P32455 592 aa15.81■□□□□ 0.12
TRAF4-212ENST00000498540 UBA7P41226 1012 aa15.81■□□□□ 0.12
TRAF4-212ENST00000498540 DGKEP52429 567 aa15.81■□□□□ 0.12
TRAF4-212ENST00000498540 GRIN1Q05586 938 aa15.81■□□□□ 0.12
TRAF4-212ENST00000498540 ZNF252P-AS1Q0IIN9 211 aa15.81■□□□□ 0.12
TRAF4-212ENST00000498540 NFE2Q16621 373 aaPredicted RBP15.81■□□□□ 0.12
TRAF4-212ENST00000498540 EML3Q32P44 896 aa15.81■□□□□ 0.12
TRAF4-212ENST00000498540 SLFN12LQ6IEE8 588 aa15.81■□□□□ 0.12
TRAF4-212ENST00000498540 UNQ6494/PRO21346Q6UXR6 183 aa15.81■□□□□ 0.12
TRAF4-212ENST00000498540 ATP2A3Q93084 1043 aa15.81■□□□□ 0.12
TRAF4-212ENST00000498540 TRMT2BQ96GJ1 504 aaKnown RBP15.81■□□□□ 0.12
TRAF4-212ENST00000498540 FAM84AQ96KN4 292 aa15.81■□□□□ 0.12
TRAF4-212ENST00000498540 PKMYT1Q99640 499 aa15.81■□□□□ 0.12
TRAF4-212ENST00000498540 TPSD1Q9BZJ3 242 aa15.81■□□□□ 0.12
TRAF4-212ENST00000498540 UXTQ9UBK9 157 aaPredicted RBP15.81■□□□□ 0.12
TRAF4-212ENST00000498540 TRAV19A0A0A6YYK7 116 aa15.8■□□□□ 0.12
TRAF4-212ENST00000498540 HCRTO43612 131 aa15.8■□□□□ 0.12
TRAF4-212ENST00000498540 IL18RAPO95256 599 aa15.8■□□□□ 0.12
TRAF4-212ENST00000498540 CKMP06732 381 aa15.8■□□□□ 0.12
TRAF4-212ENST00000498540 USP17L7P0C7H9 530 aa15.8■□□□□ 0.12
TRAF4-212ENST00000498540 SPINK2P20155 84 aa15.8■□□□□ 0.12
TRAF4-212ENST00000498540 POLR2BP30876 1174 aaKnown RBP15.8■□□□□ 0.12
TRAF4-212ENST00000498540 ABCD1P33897 745 aa15.8■□□□□ 0.12
TRAF4-212ENST00000498540 IFNAR2P48551 515 aa15.8■□□□□ 0.12
TRAF4-212ENST00000498540 RPL10AP62906 217 aaKnown RBP15.8■□□□□ 0.12
TRAF4-212ENST00000498540 FOXC1Q12948 553 aa15.8■□□□□ 0.12
TRAF4-212ENST00000498540 INTS6LQ5JSJ4 861 aaKnown RBP15.8■□□□□ 0.12
TRAF4-212ENST00000498540 SH3PXD2AQ5TCZ1 1133 aa15.8■□□□□ 0.12
TRAF4-212ENST00000498540 PMS2CLQ68D20 193 aa15.8■□□□□ 0.12
TRAF4-212ENST00000498540 OSTM1Q86WC4 334 aa15.8■□□□□ 0.12
TRAF4-212ENST00000498540 ARL14EPQ8N8R7 260 aaPredicted RBP15.8■□□□□ 0.12
TRAF4-212ENST00000498540 ZSWIM2Q8NEG5 633 aa15.8■□□□□ 0.12
TRAF4-212ENST00000498540 TSTD1Q8NFU3 115 aa15.8■□□□□ 0.12
TRAF4-212ENST00000498540 POMGNT1Q8WZA1 660 aa15.8■□□□□ 0.12
TRAF4-212ENST00000498540 EXOC4Q96A65 974 aa15.8■□□□□ 0.12
TRAF4-212ENST00000498540 MYRFLQ96LU7 910 aa15.8■□□□□ 0.12
TRAF4-212ENST00000498540 ACBD6Q9BR61 282 aa15.8■□□□□ 0.12
TRAF4-212ENST00000498540 ST6GALNAC4Q9H4F1 302 aa15.8■□□□□ 0.12
TRAF4-212ENST00000498540 TMEM206Q9H813 350 aa15.8■□□□□ 0.12
TRAF4-212ENST00000498540 ABCB6Q9NP58 842 aa15.8■□□□□ 0.12
TRAF4-212ENST00000498540 DDX43Q9NXZ2 648 aaKnown RBP15.8■□□□□ 0.12
TRAF4-212ENST00000498540 GTF3C4Q9UKN8 822 aa15.8■□□□□ 0.12
TRAF4-212ENST00000498540 ZMIZ1Q9ULJ6 1067 aa15.8■□□□□ 0.12
TRAF4-212ENST00000498540 WASF3Q9UPY6 502 aa15.8■□□□□ 0.12
TRAF4-212ENST00000498540 SPEGQ15772 3267 aa15.79■□□□□ 0.12
TRAF4-212ENST00000498540 C2orf78A6NCI8 922 aa15.79■□□□□ 0.12
TRAF4-212ENST00000498540 PATE3B3GLJ2 98 aa15.79■□□□□ 0.12
TRAF4-212ENST00000498540 TULP1O00294 542 aaPredicted RBP15.79■□□□□ 0.12
TRAF4-212ENST00000498540 TOP3BO95985 862 aaKnown RBP15.79■□□□□ 0.12
TRAF4-212ENST00000498540 ITGB3P05106 788 aa15.79■□□□□ 0.12
TRAF4-212ENST00000498540 BCKDHBP21953 392 aa15.79■□□□□ 0.12
TRAF4-212ENST00000498540 PNPLA4P41247 253 aa15.79■□□□□ 0.12
TRAF4-212ENST00000498540 SEC13P55735 322 aa15.79■□□□□ 0.12
TRAF4-212ENST00000498540 TFAMQ00059 246 aaKnown RBP15.79■□□□□ 0.12
TRAF4-212ENST00000498540 POU5F1Q01860 360 aaKnown RBP15.79■□□□□ 0.12
TRAF4-212ENST00000498540 SFR1Q86XK3 245 aa15.79■□□□□ 0.12
TRAF4-212ENST00000498540 NT5DC4Q86YG4 428 aa15.79■□□□□ 0.12
TRAF4-212ENST00000498540 C1orf127Q8N9H9 656 aa15.79■□□□□ 0.12
TRAF4-212ENST00000498540 RASSF8Q8NHQ8 419 aa15.79■□□□□ 0.12
TRAF4-212ENST00000498540 SH3RF2Q8TEC5 729 aa15.79■□□□□ 0.12
TRAF4-212ENST00000498540 LARP4BQ92615 738 aaKnown RBP15.79■□□□□ 0.12
TRAF4-212ENST00000498540 LINC00597Q9H2U6 94 aa15.79■□□□□ 0.12
TRAF4-212ENST00000498540 GCNT4Q9P109 453 aa15.79■□□□□ 0.12
TRAF4-212ENST00000498540 AGAP1Q9UPQ3 857 aa15.79■□□□□ 0.12
TRAF4-212ENST00000498540 KIF3AQ9Y496 699 aa15.79■□□□□ 0.12
TRAF4-212ENST00000498540 ASPMQ8IZT6 3477 aa15.78■□□□□ 0.12
TRAF4-212ENST00000498540 AKAP13Q12802 2813 aa15.78■□□□□ 0.12
TRAF4-212ENST00000498540 TNRC6BQ9UPQ9 1833 aaKnown RBP15.78■□□□□ 0.12
TRAF4-212ENST00000498540 PPP1R37O75864 691 aa15.78■□□□□ 0.12
TRAF4-212ENST00000498540 OPRD1P41143 372 aa15.78■□□□□ 0.12
TRAF4-212ENST00000498540 KCNA1Q09470 495 aa15.78■□□□□ 0.12
TRAF4-212ENST00000498540 C2orf27AQ580R0 203 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms