RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 TRPC7Q9HCX4 862 aa17.29■□□□□ 0.36
MUC1-220ENST00000498431 L1RE1Q9UN81 338 aa17.29■□□□□ 0.36
MUC1-220ENST00000498431 INVSQ9Y283 1065 aa17.29■□□□□ 0.36
MUC1-220ENST00000498431 WNT6Q9Y6F9 365 aa17.29■□□□□ 0.36
MUC1-220ENST00000498431 ANAPC1Q9H1A4 1944 aa17.29■□□□□ 0.36
MUC1-220ENST00000498431 CACNA1GO43497 2377 aa17.29■□□□□ 0.36
MUC1-220ENST00000498431 HCRTO43612 131 aa17.28■□□□□ 0.36
MUC1-220ENST00000498431 APBB3O95704 486 aa17.28■□□□□ 0.36
MUC1-220ENST00000498431 POLR2BP30876 1174 aaKnown RBP17.28■□□□□ 0.36
MUC1-220ENST00000498431 AMPD2Q01433 879 aa17.28■□□□□ 0.36
MUC1-220ENST00000498431 CREB5Q02930 508 aa17.28■□□□□ 0.36
MUC1-220ENST00000498431 FAM160A1Q05DH4 1040 aa17.28■□□□□ 0.36
MUC1-220ENST00000498431 KCNA1Q09470 495 aa17.28■□□□□ 0.36
MUC1-220ENST00000498431 USP4Q13107 963 aa17.28■□□□□ 0.36
MUC1-220ENST00000498431 SLFN12LQ6IEE8 588 aa17.28■□□□□ 0.36
MUC1-220ENST00000498431 SYT13Q7L8C5 426 aa17.28■□□□□ 0.36
MUC1-220ENST00000498431 OSTM1Q86WC4 334 aa17.28■□□□□ 0.36
MUC1-220ENST00000498431 SFR1Q86XK3 245 aa17.28■□□□□ 0.36
MUC1-220ENST00000498431 ABCA7Q8IZY2 2146 aa17.28■□□□□ 0.36
MUC1-220ENST00000498431 CPA6Q8N4T0 437 aa17.28■□□□□ 0.36
MUC1-220ENST00000498431 LEO1Q8WVC0 666 aaPredicted RBP17.28■□□□□ 0.36
MUC1-220ENST00000498431 OSCP1Q8WVF1 389 aa17.28■□□□□ 0.36
MUC1-220ENST00000498431 POMGNT1Q8WZA1 660 aa17.28■□□□□ 0.36
MUC1-220ENST00000498431 LARP4BQ92615 738 aaKnown RBP17.28■□□□□ 0.36
MUC1-220ENST00000498431 CD101Q93033 1021 aa17.28■□□□□ 0.36
MUC1-220ENST00000498431 ZNF560Q96MR9 790 aa17.28■□□□□ 0.36
MUC1-220ENST00000498431 PKMYT1Q99640 499 aa17.28■□□□□ 0.36
MUC1-220ENST00000498431 ST6GALNAC4Q9H4F1 302 aa17.28■□□□□ 0.36
MUC1-220ENST00000498431 DUS2Q9NX74 493 aaKnown RBP17.28■□□□□ 0.36
MUC1-220ENST00000498431 KIF3AQ9Y496 699 aa17.28■□□□□ 0.36
MUC1-220ENST00000498431 NUP205Q92621 2012 aa17.28■□□□□ 0.36
MUC1-220ENST00000498431 BCLAF3A2AJT9 711 aaKnown RBP17.27■□□□□ 0.36
MUC1-220ENST00000498431 C2orf78A6NCI8 922 aa17.27■□□□□ 0.36
MUC1-220ENST00000498431 C4orf47A7E2U8 309 aa17.27■□□□□ 0.36
MUC1-220ENST00000498431 SOBPA7XYQ1 873 aa17.27■□□□□ 0.36
MUC1-220ENST00000498431 TULP1O00294 542 aaPredicted RBP17.27■□□□□ 0.36
MUC1-220ENST00000498431 NOL4O94818 638 aa17.27■□□□□ 0.36
MUC1-220ENST00000498431 ITGB3P05106 788 aa17.27■□□□□ 0.36
MUC1-220ENST00000498431 GJB2P29033 226 aa17.27■□□□□ 0.36
MUC1-220ENST00000498431 TFAMQ00059 246 aaKnown RBP17.27■□□□□ 0.36
MUC1-220ENST00000498431 PSMD2Q13200 908 aa17.27■□□□□ 0.36
MUC1-220ENST00000498431 ELF2Q15723 593 aa17.27■□□□□ 0.36
MUC1-220ENST00000498431 NFE2Q16621 373 aaPredicted RBP17.27■□□□□ 0.36
MUC1-220ENST00000498431 EML3Q32P44 896 aa17.27■□□□□ 0.36
MUC1-220ENST00000498431 FBXO43Q4G163 708 aa17.27■□□□□ 0.36
MUC1-220ENST00000498431 ZNF720Q7Z2F6 126 aa17.27■□□□□ 0.36
MUC1-220ENST00000498431 C1orf127Q8N9H9 656 aa17.27■□□□□ 0.36
MUC1-220ENST00000498431 TRMT2BQ96GJ1 504 aaKnown RBP17.27■□□□□ 0.36
MUC1-220ENST00000498431 LINC00597Q9H2U6 94 aa17.27■□□□□ 0.36
MUC1-220ENST00000498431 DDX43Q9NXZ2 648 aaKnown RBP17.27■□□□□ 0.36
MUC1-220ENST00000498431 EBF1Q9UH73 591 aa17.27■□□□□ 0.36
MUC1-220ENST00000498431 GTF3C4Q9UKN8 822 aa17.27■□□□□ 0.36
MUC1-220ENST00000498431 AGAP1Q9UPQ3 857 aa17.27■□□□□ 0.36
MUC1-220ENST00000498431 HELZP42694 1942 aaKnown RBP17.26■□□□□ 0.35
MUC1-220ENST00000498431 LNP1A1A4G5 178 aa17.26■□□□□ 0.35
MUC1-220ENST00000498431 H3BQV1 296 aa17.26■□□□□ 0.35
MUC1-220ENST00000498431 PPP1R37O75864 691 aa17.26■□□□□ 0.35
MUC1-220ENST00000498431 IL18RAPO95256 599 aa17.26■□□□□ 0.35
MUC1-220ENST00000498431 CAVIN2O95810 425 aa17.26■□□□□ 0.35
MUC1-220ENST00000498431 CKMP06732 381 aa17.26■□□□□ 0.35
MUC1-220ENST00000498431 IFNAR2P48551 515 aa17.26■□□□□ 0.35
MUC1-220ENST00000498431 NOVA1P51513 510 aaKnown RBP17.26■□□□□ 0.35
MUC1-220ENST00000498431 DGKEP52429 567 aa17.26■□□□□ 0.35
MUC1-220ENST00000498431 POU5F1Q01860 360 aaKnown RBP17.26■□□□□ 0.35
MUC1-220ENST00000498431 INTS6LQ5JSJ4 861 aaKnown RBP17.26■□□□□ 0.35
MUC1-220ENST00000498431 USP49Q70CQ1 688 aa17.26■□□□□ 0.35
MUC1-220ENST00000498431 DYMQ7RTS9 669 aa17.26■□□□□ 0.35
MUC1-220ENST00000498431 ARL14EPQ8N8R7 260 aaPredicted RBP17.26■□□□□ 0.35
MUC1-220ENST00000498431 RASSF8Q8NHQ8 419 aa17.26■□□□□ 0.35
MUC1-220ENST00000498431 CXorf38Q8TB03 319 aa17.26■□□□□ 0.35
MUC1-220ENST00000498431 ATP2A3Q93084 1043 aa17.26■□□□□ 0.35
MUC1-220ENST00000498431 SAAL1Q96ER3 474 aa17.26■□□□□ 0.35
MUC1-220ENST00000498431 MYRFLQ96LU7 910 aa17.26■□□□□ 0.35
MUC1-220ENST00000498431 ACBD6Q9BR61 282 aa17.26■□□□□ 0.35
MUC1-220ENST00000498431 FAM213AQ9BRX8 229 aa17.26■□□□□ 0.35
MUC1-220ENST00000498431 STRA6Q9BX79 667 aa17.26■□□□□ 0.35
MUC1-220ENST00000498431 TPSD1Q9BZJ3 242 aa17.26■□□□□ 0.35
MUC1-220ENST00000498431 TMEM206Q9H813 350 aa17.26■□□□□ 0.35
MUC1-220ENST00000498431 ABCB6Q9NP58 842 aa17.26■□□□□ 0.35
MUC1-220ENST00000498431 GCNT4Q9P109 453 aa17.26■□□□□ 0.35
MUC1-220ENST00000498431 UXTQ9UBK9 157 aaPredicted RBP17.26■□□□□ 0.35
MUC1-220ENST00000498431 IGF2RP11717 2491 aa17.26■□□□□ 0.35
MUC1-220ENST00000498431 TRAV19A0A0A6YYK7 116 aa17.25■□□□□ 0.35
MUC1-220ENST00000498431 C1QTNF9BB2RNN3 333 aa17.25■□□□□ 0.35
MUC1-220ENST00000498431 RHOBTB1O94844 696 aa17.25■□□□□ 0.35
MUC1-220ENST00000498431 CD2BP2O95400 341 aaKnown RBP17.25■□□□□ 0.35
MUC1-220ENST00000498431 USP17L7P0C7H9 530 aa17.25■□□□□ 0.35
MUC1-220ENST00000498431 C1QTNF9P0C862 333 aa17.25■□□□□ 0.35
MUC1-220ENST00000498431 BCKDHBP21953 392 aa17.25■□□□□ 0.35
MUC1-220ENST00000498431 GBP1P32455 592 aa17.25■□□□□ 0.35
MUC1-220ENST00000498431 ABCD1P33897 745 aa17.25■□□□□ 0.35
MUC1-220ENST00000498431 PNPLA4P41247 253 aa17.25■□□□□ 0.35
MUC1-220ENST00000498431 RPL10AP62906 217 aaKnown RBP17.25■□□□□ 0.35
MUC1-220ENST00000498431 ZXDBP98169 803 aa17.25■□□□□ 0.35
MUC1-220ENST00000498431 NT5DC4Q86YG4 428 aa17.25■□□□□ 0.35
MUC1-220ENST00000498431 SH3RF2Q8TEC5 729 aa17.25■□□□□ 0.35
MUC1-220ENST00000498431 ACDQ96AP0 544 aa17.25■□□□□ 0.35
MUC1-220ENST00000498431 THADAQ6YHU6 1953 aa17.25■□□□□ 0.35
MUC1-220ENST00000498431 PTPRDP23468 1912 aa17.24■□□□□ 0.35
MUC1-220ENST00000498431 PATE3B3GLJ2 98 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms