RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 CLCN1P35523 988 aa14.41□□□□□ -0.1
CPNE1-227ENST00000498056 NRIP1P48552 1158 aa14.41□□□□□ -0.1
CPNE1-227ENST00000498056 TBX2Q13207 712 aaPredicted RBP14.41□□□□□ -0.1
CPNE1-227ENST00000498056 LRRTM3Q86VH5 581 aa14.41□□□□□ -0.1
CPNE1-227ENST00000498056 MYCBPAPQ8TBZ2 947 aa14.41□□□□□ -0.1
CPNE1-227ENST00000498056 EPS8L1Q8TE68 723 aa14.41□□□□□ -0.1
CPNE1-227ENST00000498056 SEPT5Q99719 369 aaPredicted RBP14.41□□□□□ -0.1
CPNE1-227ENST00000498056 ZNF518BQ9C0D4 1074 aa14.41□□□□□ -0.1
CPNE1-227ENST00000498056 NUCKS1Q9H1E3 243 aaKnown RBP14.41□□□□□ -0.1
CPNE1-227ENST00000498056 NSUN3Q9H649 340 aaKnown RBP14.41□□□□□ -0.1
CPNE1-227ENST00000498056 SEPT11Q9NVA2 429 aaKnown RBP14.41□□□□□ -0.1
CPNE1-227ENST00000498056 PCDHB5Q9Y5E4 795 aa14.41□□□□□ -0.1
CPNE1-227ENST00000498056 DOCK6Q96HP0 2047 aa14.41□□□□□ -0.1
CPNE1-227ENST00000498056 ANAPC1Q9H1A4 1944 aa14.41□□□□□ -0.1
CPNE1-227ENST00000498056 PER2O15055 1255 aa14.4□□□□□ -0.1
CPNE1-227ENST00000498056 MED7O43513 233 aa14.4□□□□□ -0.1
CPNE1-227ENST00000498056 CCDC172P0C7W6 258 aa14.4□□□□□ -0.1
CPNE1-227ENST00000498056 CYP11B1P15538 503 aa14.4□□□□□ -0.1
CPNE1-227ENST00000498056 BPIFB4P59827 614 aa14.4□□□□□ -0.1
CPNE1-227ENST00000498056 ADCY1Q08828 1119 aa14.4□□□□□ -0.1
CPNE1-227ENST00000498056 GPR17Q13304 367 aa14.4□□□□□ -0.1
CPNE1-227ENST00000498056 NFE2Q16621 373 aaPredicted RBP14.4□□□□□ -0.1
CPNE1-227ENST00000498056 TSR1Q2NL82 804 aaKnown RBP14.4□□□□□ -0.1
CPNE1-227ENST00000498056 MGAT5BQ3V5L5 792 aa14.4□□□□□ -0.1
CPNE1-227ENST00000498056 PPP1R26Q5T8A7 1209 aaPredicted RBP14.4□□□□□ -0.1
CPNE1-227ENST00000498056 LLGL2Q6P1M3 1020 aa14.4□□□□□ -0.1
CPNE1-227ENST00000498056 NOP9Q86U38 636 aaKnown RBP14.4□□□□□ -0.1
CPNE1-227ENST00000498056 PASD1Q8IV76 773 aa14.4□□□□□ -0.1
CPNE1-227ENST00000498056 CRYBG2Q8N1P7 616 aa14.4□□□□□ -0.1
CPNE1-227ENST00000498056 TTC9BQ8N6N2 239 aa14.4□□□□□ -0.1
CPNE1-227ENST00000498056 SPPL2BQ8TCT7 592 aa14.4□□□□□ -0.1
CPNE1-227ENST00000498056 SLC20A1Q8WUM9 679 aa14.4□□□□□ -0.1
CPNE1-227ENST00000498056 TFAP2BQ92481 460 aa14.4□□□□□ -0.1
CPNE1-227ENST00000498056 CYFIP2Q96F07 1278 aa14.4□□□□□ -0.1
CPNE1-227ENST00000498056 B3GNT5Q9BYG0 378 aa14.4□□□□□ -0.1
CPNE1-227ENST00000498056 PDCL3Q9H2J4 239 aa14.4□□□□□ -0.1
CPNE1-227ENST00000498056 TLE6Q9H808 572 aa14.4□□□□□ -0.1
CPNE1-227ENST00000498056 IMPACTQ9P2X3 320 aa14.4□□□□□ -0.1
CPNE1-227ENST00000498056 HESX1Q9UBX0 185 aa14.4□□□□□ -0.1
CPNE1-227ENST00000498056 TSPAN16Q9UKR8 245 aa14.4□□□□□ -0.1
CPNE1-227ENST00000498056 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.4□□□□□ -0.1
CPNE1-227ENST00000498056 HELZP42694 1942 aaKnown RBP14.4□□□□□ -0.1
CPNE1-227ENST00000498056 DENND4AQ7Z401 1863 aa14.4□□□□□ -0.1
CPNE1-227ENST00000498056 FAM170AA1A519 330 aa14.39□□□□□ -0.11
CPNE1-227ENST00000498056 O00370 1275 aa14.39□□□□□ -0.11
CPNE1-227ENST00000498056 PRRG1O14668 218 aa14.39□□□□□ -0.11
CPNE1-227ENST00000498056 TGM5O43548 720 aa14.39□□□□□ -0.11
CPNE1-227ENST00000498056 CLASP2O75122 1294 aaKnown RBP14.39□□□□□ -0.11
CPNE1-227ENST00000498056 AP1G2O75843 785 aa14.39□□□□□ -0.11
CPNE1-227ENST00000498056 SPATA31D3P0C874 917 aa14.39□□□□□ -0.11
CPNE1-227ENST00000498056 FAM200BP0CF97 657 aa14.39□□□□□ -0.11
CPNE1-227ENST00000498056 BDNFP23560 247 aa14.39□□□□□ -0.11
CPNE1-227ENST00000498056 ELF1P32519 619 aa14.39□□□□□ -0.11
CPNE1-227ENST00000498056 KLHL30Q0D2K2 578 aa14.39□□□□□ -0.11
CPNE1-227ENST00000498056 RAB33AQ14088 237 aa14.39□□□□□ -0.11
CPNE1-227ENST00000498056 STILQ15468 1287 aa14.39□□□□□ -0.11
CPNE1-227ENST00000498056 DUSP6Q16828 381 aa14.39□□□□□ -0.11
CPNE1-227ENST00000498056 TCEAL5Q5H9L2 206 aa14.39□□□□□ -0.11
CPNE1-227ENST00000498056 LIN9Q5TKA1 542 aa14.39□□□□□ -0.11
CPNE1-227ENST00000498056 TPGS2Q68CL5 300 aa14.39□□□□□ -0.11
CPNE1-227ENST00000498056 ARHGAP17Q68EM7 881 aa14.39□□□□□ -0.11
CPNE1-227ENST00000498056 FAM171BQ6P995 826 aa14.39□□□□□ -0.11
CPNE1-227ENST00000498056 SPATA31D4Q6ZUB0 917 aa14.39□□□□□ -0.11
CPNE1-227ENST00000498056 FUKQ8N0W3 1084 aa14.39□□□□□ -0.11
CPNE1-227ENST00000498056 ATAD1Q8NBU5 361 aa14.39□□□□□ -0.11
CPNE1-227ENST00000498056 OR8K1Q8NGG5 319 aa14.39□□□□□ -0.11
CPNE1-227ENST00000498056 C2orf15Q8WU43 125 aaKnown RBP14.39□□□□□ -0.11
CPNE1-227ENST00000498056 SMARCD1Q96GM5 515 aa14.39□□□□□ -0.11
CPNE1-227ENST00000498056 DNAJC7Q99615 494 aa14.39□□□□□ -0.11
CPNE1-227ENST00000498056 ZSWIM1Q9BR11 485 aa14.39□□□□□ -0.11
CPNE1-227ENST00000498056 CYP4F11Q9HBI6 524 aa14.39□□□□□ -0.11
CPNE1-227ENST00000498056 ZNHIT6Q9NWK9 470 aaKnown RBP14.39□□□□□ -0.11
CPNE1-227ENST00000498056 AFF4Q9UHB7 1163 aaKnown RBP14.39□□□□□ -0.11
CPNE1-227ENST00000498056 FBXW11Q9UKB1 542 aa14.39□□□□□ -0.11
CPNE1-227ENST00000498056 CEP83Q9Y592 693 aa14.39□□□□□ -0.11
CPNE1-227ENST00000498056 SOAT2O75908 522 aa14.38□□□□□ -0.11
CPNE1-227ENST00000498056 MICAL2O94851 1124 aa14.38□□□□□ -0.11
CPNE1-227ENST00000498056 VNN2O95498 520 aa14.38□□□□□ -0.11
CPNE1-227ENST00000498056 PTMAP06454 111 aaKnown RBP14.38□□□□□ -0.11
CPNE1-227ENST00000498056 MMEP08473 750 aa14.38□□□□□ -0.11
CPNE1-227ENST00000498056 SKILP12757 684 aa14.38□□□□□ -0.11
CPNE1-227ENST00000498056 EPCAMP16422 314 aa14.38□□□□□ -0.11
CPNE1-227ENST00000498056 CLCN4P51793 760 aa14.38□□□□□ -0.11
CPNE1-227ENST00000498056 BCAT1P54687 386 aa14.38□□□□□ -0.11
CPNE1-227ENST00000498056 SMARCB1Q12824 385 aa14.38□□□□□ -0.11
CPNE1-227ENST00000498056 ADGRE1Q14246 886 aa14.38□□□□□ -0.11
CPNE1-227ENST00000498056 CFAP221Q4G0U5 840 aa14.38□□□□□ -0.11
CPNE1-227ENST00000498056 SCN4BQ8IWT1 228 aa14.38□□□□□ -0.11
CPNE1-227ENST00000498056 TC2NQ8N9U0 490 aa14.38□□□□□ -0.11
CPNE1-227ENST00000498056 ZNF461Q8TAF7 563 aa14.38□□□□□ -0.11
CPNE1-227ENST00000498056 SLC7A14Q8TBB6 771 aa14.38□□□□□ -0.11
CPNE1-227ENST00000498056 MYLIPQ8WY64 445 aa14.38□□□□□ -0.11
CPNE1-227ENST00000498056 FUBP3Q96I24 572 aaKnown RBP eCLIP14.38□□□□□ -0.11
CPNE1-227ENST00000498056 HNRNPABQ99729 332 aaKnown RBP14.38□□□□□ -0.11
CPNE1-227ENST00000498056 CRISPLD1Q9H336 500 aa14.38□□□□□ -0.11
CPNE1-227ENST00000498056 IGFLR1Q9H665 355 aa14.38□□□□□ -0.11
CPNE1-227ENST00000498056 HAUS4Q9H6D7 363 aa14.38□□□□□ -0.11
CPNE1-227ENST00000498056 MAN1C1Q9NR34 630 aa14.38□□□□□ -0.11
CPNE1-227ENST00000498056 AIPL1Q9NZN9 384 aa14.38□□□□□ -0.11
CPNE1-227ENST00000498056 NOCTQ9UK39 431 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms