RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 CNN3Q15417 329 aaKnown RBP4.05□□□□□ -1.76
PSPC1-205ENST00000497722 AMOTQ4VCS5 1084 aa4.05□□□□□ -1.76
PSPC1-205ENST00000497722 SLC44A4Q53GD3 710 aa4.05□□□□□ -1.76
PSPC1-205ENST00000497722 LAYNQ6UX15 382 aa4.05□□□□□ -1.76
PSPC1-205ENST00000497722 SLC30A10Q6XR72 485 aa4.05□□□□□ -1.76
PSPC1-205ENST00000497722 MAEAQ7L5Y9 396 aa4.05□□□□□ -1.76
PSPC1-205ENST00000497722 OVCH2Q7RTZ1 564 aa4.05□□□□□ -1.76
PSPC1-205ENST00000497722 C1QL2Q7Z5L3 287 aa4.05□□□□□ -1.76
PSPC1-205ENST00000497722 FAM156AQ8NDB6 213 aa4.05□□□□□ -1.76
PSPC1-205ENST00000497722 TOR1AIP2Q8NFQ8 470 aa4.05□□□□□ -1.76
PSPC1-205ENST00000497722 FBXO41Q8TF61 875 aa4.05□□□□□ -1.76
PSPC1-205ENST00000497722 DDX17Q92841 729 aaKnown RBP4.05□□□□□ -1.76
PSPC1-205ENST00000497722 TIFAQ96CG3 184 aa4.05□□□□□ -1.76
PSPC1-205ENST00000497722 BRIP1Q9BX63 1249 aa4.05□□□□□ -1.76
PSPC1-205ENST00000497722 AMBRA1Q9C0C7 1298 aa4.05□□□□□ -1.76
PSPC1-205ENST00000497722 MRPL46Q9H2W6 279 aaKnown RBP4.05□□□□□ -1.76
PSPC1-205ENST00000497722 SMOC2Q9H3U7 446 aa4.05□□□□□ -1.76
PSPC1-205ENST00000497722 GABBR1Q9UBS5 961 aa4.05□□□□□ -1.76
PSPC1-205ENST00000497722 ZDHHC8Q9ULC8 765 aa4.05□□□□□ -1.76
PSPC1-205ENST00000497722 OGDHLQ9ULD0 1010 aa4.05□□□□□ -1.76
PSPC1-205ENST00000497722 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.05□□□□□ -1.76
PSPC1-205ENST00000497722 SNX13Q9Y5W8 968 aa4.05□□□□□ -1.76
PSPC1-205ENST00000497722 A0A088AWK7 358 aa4.04□□□□□ -1.76
PSPC1-205ENST00000497722 DNAJC9-AS1A6NH13 148 aa4.04□□□□□ -1.76
PSPC1-205ENST00000497722 PQBP1O60828 265 aaKnown RBP4.04□□□□□ -1.76
PSPC1-205ENST00000497722 VPS4BO75351 444 aa4.04□□□□□ -1.76
PSPC1-205ENST00000497722 MYL1P05976 194 aa4.04□□□□□ -1.76
PSPC1-205ENST00000497722 CHRM2P08172 466 aa4.04□□□□□ -1.76
PSPC1-205ENST00000497722 KRTAP10-6P60371 365 aaPredicted RBP4.04□□□□□ -1.76
PSPC1-205ENST00000497722 FAM193AP78312 1265 aa4.04□□□□□ -1.76
PSPC1-205ENST00000497722 NKX6-1P78426 367 aaPredicted RBP4.04□□□□□ -1.76
PSPC1-205ENST00000497722 TFF2Q03403 129 aa4.04□□□□□ -1.76
PSPC1-205ENST00000497722 GBX1Q14549 363 aa4.04□□□□□ -1.76
PSPC1-205ENST00000497722 COBLL1Q53SF7 1204 aa4.04□□□□□ -1.76
PSPC1-205ENST00000497722 RNF220Q5VTB9 566 aa4.04□□□□□ -1.76
PSPC1-205ENST00000497722 TAF2Q6P1X5 1199 aa4.04□□□□□ -1.76
PSPC1-205ENST00000497722 ZNF783Q6ZMS7 281 aa4.04□□□□□ -1.76
PSPC1-205ENST00000497722 PPP1R3BQ86XI6 285 aa4.04□□□□□ -1.76
PSPC1-205ENST00000497722 OR6B3Q8NGW1 331 aa4.04□□□□□ -1.76
PSPC1-205ENST00000497722 PBKQ96KB5 322 aa4.04□□□□□ -1.76
PSPC1-205ENST00000497722 CNPPD1Q9BV87 410 aa4.04□□□□□ -1.76
PSPC1-205ENST00000497722 LRRC27Q9C0I9 530 aa4.04□□□□□ -1.76
PSPC1-205ENST00000497722 TMEM60Q9H2L4 133 aa4.04□□□□□ -1.76
PSPC1-205ENST00000497722 ZSCAN32Q9NX65 697 aa4.04□□□□□ -1.76
PSPC1-205ENST00000497722 A0A0B4J269 797 aa4.03□□□□□ -1.76
PSPC1-205ENST00000497722 GOLIM4O00461 696 aa4.03□□□□□ -1.76
PSPC1-205ENST00000497722 TPP1O14773 563 aa4.03□□□□□ -1.76
PSPC1-205ENST00000497722 CHEK2O96017 543 aa4.03□□□□□ -1.76
PSPC1-205ENST00000497722 GRPP07492 148 aa4.03□□□□□ -1.76
PSPC1-205ENST00000497722 RHOP08100 348 aa4.03□□□□□ -1.76
PSPC1-205ENST00000497722 HDCP19113 662 aa4.03□□□□□ -1.76
PSPC1-205ENST00000497722 GPD1P21695 349 aa4.03□□□□□ -1.76
PSPC1-205ENST00000497722 PEX2P28328 305 aa4.03□□□□□ -1.76
PSPC1-205ENST00000497722 NDUFV1P49821 464 aa4.03□□□□□ -1.76
PSPC1-205ENST00000497722 TUBB3Q13509 450 aa4.03□□□□□ -1.76
PSPC1-205ENST00000497722 BOP1Q14137 746 aaKnown RBP4.03□□□□□ -1.76
PSPC1-205ENST00000497722 HLTFQ14527 1009 aaKnown RBP eCLIP4.03□□□□□ -1.76
PSPC1-205ENST00000497722 AKNAD1Q5T1N1 836 aa4.03□□□□□ -1.76
PSPC1-205ENST00000497722 TSTD2Q5T7W7 516 aa4.03□□□□□ -1.76
PSPC1-205ENST00000497722 PTF1AQ7RTS3 328 aa4.03□□□□□ -1.76
PSPC1-205ENST00000497722 USP37Q86T82 979 aa4.03□□□□□ -1.76
PSPC1-205ENST00000497722 CCDC146Q8IYE0 955 aa4.03□□□□□ -1.76
PSPC1-205ENST00000497722 PSD4Q8NDX1 1056 aa4.03□□□□□ -1.76
PSPC1-205ENST00000497722 FAM46DQ8NEK8 389 aa4.03□□□□□ -1.76
PSPC1-205ENST00000497722 LRTOMTQ8WZ04 291 aa4.03□□□□□ -1.76
PSPC1-205ENST00000497722 NT5C1BQ96P26 610 aa4.03□□□□□ -1.76
PSPC1-205ENST00000497722 C1QTNF7Q9BXJ2 289 aa4.03□□□□□ -1.76
PSPC1-205ENST00000497722 ZMAT3Q9HA38 289 aaKnown RBP4.03□□□□□ -1.76
PSPC1-205ENST00000497722 ZNF287Q9HBT7 754 aa4.03□□□□□ -1.76
PSPC1-205ENST00000497722 CPNE5Q9HCH3 593 aa4.03□□□□□ -1.76
PSPC1-205ENST00000497722 SACM1LQ9NTJ5 587 aa4.03□□□□□ -1.76
PSPC1-205ENST00000497722 PCDHGB6Q9Y5F9 930 aa4.03□□□□□ -1.76
PSPC1-205ENST00000497722 GCOM1H8Y6P7 765 aaPredicted RBP4.02□□□□□ -1.77
PSPC1-205ENST00000497722 ORC4O43929 436 aa4.02□□□□□ -1.77
PSPC1-205ENST00000497722 SOAT2O75908 522 aa4.02□□□□□ -1.77
PSPC1-205ENST00000497722 UNC5CO95185 931 aa4.02□□□□□ -1.77
PSPC1-205ENST00000497722 KIF20AO95235 890 aa4.02□□□□□ -1.77
PSPC1-205ENST00000497722 ZBED1O96006 694 aa4.02□□□□□ -1.77
PSPC1-205ENST00000497722 CHRM3P20309 590 aa4.02□□□□□ -1.77
PSPC1-205ENST00000497722 ITGALP20701 1170 aa4.02□□□□□ -1.77
PSPC1-205ENST00000497722 GNALP38405 381 aa4.02□□□□□ -1.77
PSPC1-205ENST00000497722 TBX4P57082 545 aa4.02□□□□□ -1.77
PSPC1-205ENST00000497722 PICALMQ13492 652 aa4.02□□□□□ -1.77
PSPC1-205ENST00000497722 RAB32Q13637 225 aa4.02□□□□□ -1.77
PSPC1-205ENST00000497722 POLD3Q15054 466 aaPredicted RBP4.02□□□□□ -1.77
PSPC1-205ENST00000497722 SAFBQ15424 915 aaKnown RBP eCLIP4.02□□□□□ -1.77
PSPC1-205ENST00000497722 LMBRD2Q68DH5 695 aaPredicted RBP4.02□□□□□ -1.77
PSPC1-205ENST00000497722 B3GALNT2Q8NCR0 500 aa4.02□□□□□ -1.77
PSPC1-205ENST00000497722 PLBD2Q8NHP8 589 aa4.02□□□□□ -1.77
PSPC1-205ENST00000497722 HASPINQ8TF76 798 aa4.02□□□□□ -1.77
PSPC1-205ENST00000497722 SUCLG2Q96I99 432 aa4.02□□□□□ -1.77
PSPC1-205ENST00000497722 MOGAT1Q96PD6 335 aa4.02□□□□□ -1.77
PSPC1-205ENST00000497722 P2RX7Q99572 595 aaKnown RBP4.02□□□□□ -1.77
PSPC1-205ENST00000497722 ALG8Q9BVK2 526 aa4.02□□□□□ -1.77
PSPC1-205ENST00000497722 APOL5Q9BWW9 433 aa4.02□□□□□ -1.77
PSPC1-205ENST00000497722 TTYH3Q9C0H2 523 aa4.02□□□□□ -1.77
PSPC1-205ENST00000497722 TINAGL1Q9GZM7 467 aaPredicted RBP4.02□□□□□ -1.77
PSPC1-205ENST00000497722 NUP62CLQ9H1M0 184 aa4.02□□□□□ -1.77
PSPC1-205ENST00000497722 SERTAD4Q9NUC0 356 aa4.02□□□□□ -1.77
PSPC1-205ENST00000497722 DKK3Q9UBP4 350 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms