RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	DDX19A	Q9NUU7	478 aa	Known RBP	6.06	□□□□□ -1.44
UBE3C-208	ENST00000497368	PRMT7	Q9NVM4	692 aa	Predicted RBP	6.06	□□□□□ -1.44
UBE3C-208	ENST00000497368	HCFC1R1	Q9NWW0	138 aa		6.06	□□□□□ -1.44
UBE3C-208	ENST00000497368	DLGAP2	Q9P1A6	1054 aa		6.06	□□□□□ -1.44
UBE3C-208	ENST00000497368	FNIP2	Q9P278	1114 aa		6.06	□□□□□ -1.44
UBE3C-208	ENST00000497368	EPS15L1	Q9UBC2	864 aa		6.06	□□□□□ -1.44
UBE3C-208	ENST00000497368	ADAM28	Q9UKQ2	775 aa		6.06	□□□□□ -1.44
UBE3C-208	ENST00000497368	CACNA1I	Q9P0X4	2223 aa		6.06	□□□□□ -1.44
UBE3C-208	ENST00000497368	FAM186A	A6NE01	2351 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	NPHP3-ACAD11	A0A0J9YXS1	232 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	PPEF2	O14830	753 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	HIP1R	O75146	1068 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	BAG4	O95429	457 aa	Known RBP	6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	GLUD1	P00367	558 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	PDIA4	P13667	645 aa	Known RBP	6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	FCAR	P24071	287 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	KLRC2	P26717	231 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	TKT	P29401	623 aa	Known RBP	6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	CA8	P35219	290 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	BRCC3	P46736	316 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	NPTX2	P47972	431 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	TRAPPC10	P48553	1259 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	CLCNKB	P51801	687 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	SLC12A3	P55017	1021 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	GIT2	Q14161	759 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	TFDP1	Q14186	410 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	UPP1	Q16831	310 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	ARSH	Q5FYA8	562 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	ARTN	Q5T4W7	220 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	SCARA3	Q6AZY7	606 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	SLC39A4	Q6P5W5	647 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	CCDC149	Q6ZUS6	474 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	CABP7	Q86V35	215 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	PALB2	Q86YC2	1186 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	GPR65	Q8IYL9	337 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	C2CD4A	Q8NCU7	369 aa	Predicted RBP	6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	ITFG1	Q8TB96	612 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	RIN2	Q8WYP3	895 aa	Predicted RBP	6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	FGF14	Q92915	247 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	KCNN1	Q92952	543 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	ZBTB45	Q96K62	511 aa	Predicted RBP	6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	MFSD14A	Q96MC6	490 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	ACO2	Q99798	780 aa	Known RBP	6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	FAM83C	Q9BQN1	747 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	NT5C3A	Q9H0P0	336 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	IKZF4	Q9H2S9	585 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	KCNK12	Q9HB15	430 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	BRMS1	Q9HCU9	246 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	UBN1	Q9NPG3	1134 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	MRPL17	Q9NRX2	175 aa	Known RBP	6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	BLOC1S4	Q9NUP1	217 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	MTRR	Q9UBK8	725 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	TUBGCP4	Q9UGJ1	667 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	RNF112	Q9ULX5	631 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	GDA	Q9Y2T3	454 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	NR2E1	Q9Y466	385 aa		6.05	□□□□□ -1.44
UBE3C-208	ENST00000497368	GPR179	Q6PRD1	2367 aa		6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	CCDC195	A0A1B0GUA6	201 aa		6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	WDR27	A2RRH5	827 aa		6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	ARHGEF35	A5YM69	484 aa		6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	TISP43	B9A030	160 aa		6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	PROB1	E7EW31	1015 aa		6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368		H0Y858	1186 aa		6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	N4BP3	O15049	544 aa		6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	EIF4EBP3	O60516	100 aa	Predicted RBP	6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	LRRN2	O75325	713 aa		6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	MOSPD3	O75425	235 aa		6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	SEC24A	O95486	1093 aa		6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	ALDH2	P05091	517 aa		6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	ADH5	P11766	374 aa		6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	AOC1	P19801	751 aa		6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	MUT	P22033	750 aa		6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	MAP4	P27816	1152 aa	Known RBP	6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	CCT6A	P40227	531 aa	Known RBP	6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	PRPH	P41219	470 aa		6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	CCR2	P41597	374 aa		6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	PEX3	P56589	373 aa		6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	HMGN5	P82970	282 aa	Known RBP	6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	PRPF4B	Q13523	1007 aa	Known RBP	6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	PSMD5	Q16401	504 aa		6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	USP41	Q3LFD5	358 aa		6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	SEZ6	Q53EL9	994 aa		6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	ATF7IP2	Q5U623	682 aa		6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	CES5A	Q6NT32	575 aa		6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	RINT1	Q6NUQ1	792 aa		6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	CDPF1	Q6NVV7	123 aa		6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	GET4	Q7L5D6	327 aa	Predicted RBP	6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	PPFIBP1	Q86W92	1011 aa		6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	EXOC8	Q8IYI6	725 aa		6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	UBALD2	Q8IYN6	164 aa		6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	MAML2	Q8IZL2	1156 aa	Predicted RBP	6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	TMEM161B	Q8NDZ6	487 aa		6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	FBLIM1	Q8WUP2	373 aa		6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	SMG7	Q92540	1137 aa	Known RBP	6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	C18orf25	Q96B23	403 aa	Predicted RBP	6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	TMX3	Q96JJ7	454 aa		6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	TARS2	Q9BW92	718 aa	Known RBP	6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	EMILIN2	Q9BXX0	1053 aa		6.04	□□□□□ -1.44
UBE3C-208	ENST00000497368	ZFP64	Q9NPA5	681 aa		6.04	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms