RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 IGSF22Q8N9C0 903 aa6.09□□□□□ -1.43
GGPS1-208ENST00000497327 TMEM176AQ96HP8 235 aa6.09□□□□□ -1.43
GGPS1-208ENST00000497327 USP28Q96RU2 1077 aa6.09□□□□□ -1.43
GGPS1-208ENST00000497327 MRPL4Q9BYD3 311 aaKnown RBP6.09□□□□□ -1.43
GGPS1-208ENST00000497327 UBA5Q9GZZ9 404 aa6.09□□□□□ -1.43
GGPS1-208ENST00000497327 FOXP1Q9H334 677 aaPredicted RBP6.09□□□□□ -1.43
GGPS1-208ENST00000497327 CPVLQ9H3G5 476 aa6.09□□□□□ -1.43
GGPS1-208ENST00000497327 JMJD4Q9H9V9 463 aa6.09□□□□□ -1.43
GGPS1-208ENST00000497327 VPS54Q9P1Q0 977 aa6.09□□□□□ -1.43
GGPS1-208ENST00000497327 FAM184BQ9ULE4 1060 aa6.09□□□□□ -1.43
GGPS1-208ENST00000497327 KCNJ14Q9UNX9 436 aa6.09□□□□□ -1.43
GGPS1-208ENST00000497327 FRMPD2Q68DX3 1309 aaPredicted RBP6.08□□□□□ -1.44
GGPS1-208ENST00000497327 ESYT2A0FGR8 921 aa6.08□□□□□ -1.44
GGPS1-208ENST00000497327 ADAMTS3O15072 1205 aa6.08□□□□□ -1.44
GGPS1-208ENST00000497327 PLA2G6O60733 806 aa6.08□□□□□ -1.44
GGPS1-208ENST00000497327 NPTXRO95502 500 aa6.08□□□□□ -1.44
GGPS1-208ENST00000497327 ASNSP08243 561 aa6.08□□□□□ -1.44
GGPS1-208ENST00000497327 EPHX2P34913 555 aa6.08□□□□□ -1.44
GGPS1-208ENST00000497327 STAT3P40763 770 aa6.08□□□□□ -1.44
GGPS1-208ENST00000497327 TOB1P50616 345 aaPredicted RBP6.08□□□□□ -1.44
GGPS1-208ENST00000497327 MECP2P51608 486 aaKnown RBP6.08□□□□□ -1.44
GGPS1-208ENST00000497327 ADAM8P78325 824 aa6.08□□□□□ -1.44
GGPS1-208ENST00000497327 KRT85P78386 507 aa6.08□□□□□ -1.44
GGPS1-208ENST00000497327 IRF9Q00978 393 aa6.08□□□□□ -1.44
GGPS1-208ENST00000497327 AKAP17AQ02040 695 aaKnown RBP6.08□□□□□ -1.44
GGPS1-208ENST00000497327 TUBA3CQ13748 450 aa6.08□□□□□ -1.44
GGPS1-208ENST00000497327 TRIM29Q14134 588 aa6.08□□□□□ -1.44
GGPS1-208ENST00000497327 KLHL40Q2TBA0 621 aa6.08□□□□□ -1.44
GGPS1-208ENST00000497327 CC2D1AQ6P1N0 951 aaPredicted RBP6.08□□□□□ -1.44
GGPS1-208ENST00000497327 TUBA3EQ6PEY2 450 aa6.08□□□□□ -1.44
GGPS1-208ENST00000497327 DIS3L2Q8IYB7 885 aaKnown RBP6.08□□□□□ -1.44
GGPS1-208ENST00000497327 ADGRF4Q8IZF3 695 aa6.08□□□□□ -1.44
GGPS1-208ENST00000497327 D2HGDHQ8N465 521 aa6.08□□□□□ -1.44
GGPS1-208ENST00000497327 GPT2Q8TD30 523 aa6.08□□□□□ -1.44
GGPS1-208ENST00000497327 CALML6Q8TD86 181 aa6.08□□□□□ -1.44
GGPS1-208ENST00000497327 LEO1Q8WVC0 666 aaPredicted RBP6.08□□□□□ -1.44
GGPS1-208ENST00000497327 RABGGTAQ92696 567 aa6.08□□□□□ -1.44
GGPS1-208ENST00000497327 HOOK2Q96ED9 719 aa6.08□□□□□ -1.44
GGPS1-208ENST00000497327 PIGSQ96S52 555 aa6.08□□□□□ -1.44
GGPS1-208ENST00000497327 FOXB1Q99853 325 aa6.08□□□□□ -1.44
GGPS1-208ENST00000497327 GLIS2Q9BZE0 524 aaPredicted RBP6.08□□□□□ -1.44
GGPS1-208ENST00000497327 FTOQ9C0B1 505 aaKnown RBP eCLIP6.08□□□□□ -1.44
GGPS1-208ENST00000497327 IKZF4Q9H2S9 585 aa6.08□□□□□ -1.44
GGPS1-208ENST00000497327 TAF1DQ9H5J8 278 aaPredicted RBP6.08□□□□□ -1.44
GGPS1-208ENST00000497327 VCPKMTQ9H867 229 aa6.08□□□□□ -1.44
GGPS1-208ENST00000497327 AURKAIP1Q9NWT8 199 aaPredicted RBP6.08□□□□□ -1.44
GGPS1-208ENST00000497327 BARHL2Q9NY43 387 aa6.08□□□□□ -1.44
GGPS1-208ENST00000497327 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.08□□□□□ -1.44
GGPS1-208ENST00000497327 VWA7Q9Y334 891 aa6.08□□□□□ -1.44
GGPS1-208ENST00000497327 MORC2Q9Y6X9 1032 aaPredicted RBP6.08□□□□□ -1.44
GGPS1-208ENST00000497327 SSC5DA1L4H1 1573 aa6.08□□□□□ -1.44
GGPS1-208ENST00000497327 hCG_1984214I3L0E3 225 aa6.07□□□□□ -1.44
GGPS1-208ENST00000497327 DVL2O14641 736 aa6.07□□□□□ -1.44
GGPS1-208ENST00000497327 ZBTB5O15062 677 aa6.07□□□□□ -1.44
GGPS1-208ENST00000497327 FIBPO43427 364 aa6.07□□□□□ -1.44
GGPS1-208ENST00000497327 YEATS4O95619 227 aa6.07□□□□□ -1.44
GGPS1-208ENST00000497327 XBP1P17861 261 aa6.07□□□□□ -1.44
GGPS1-208ENST00000497327 SLC16A2P36021 539 aa6.07□□□□□ -1.44
GGPS1-208ENST00000497327 SLC1A4P43007 532 aa6.07□□□□□ -1.44
GGPS1-208ENST00000497327 ADCY7P51828 1080 aa6.07□□□□□ -1.44
GGPS1-208ENST00000497327 UBE2HP62256 183 aa6.07□□□□□ -1.44
GGPS1-208ENST00000497327 ACAP1Q15027 740 aa6.07□□□□□ -1.44
GGPS1-208ENST00000497327 SLC39A14Q15043 492 aa6.07□□□□□ -1.44
GGPS1-208ENST00000497327 PTPAQ15257 358 aa6.07□□□□□ -1.44
GGPS1-208ENST00000497327 SAFBQ15424 915 aaKnown RBP eCLIP6.07□□□□□ -1.44
GGPS1-208ENST00000497327 SUPT20HL1Q3ZLR7 823 aa6.07□□□□□ -1.44
GGPS1-208ENST00000497327 EARS2Q5JPH6 523 aaKnown RBP6.07□□□□□ -1.44
GGPS1-208ENST00000497327 GALNT17Q6IS24 598 aa6.07□□□□□ -1.44
GGPS1-208ENST00000497327 DLK2Q6UY11 383 aa6.07□□□□□ -1.44
GGPS1-208ENST00000497327 TMPRSS6Q8IU80 811 aa6.07□□□□□ -1.44
GGPS1-208ENST00000497327 SCYL3Q8IZE3 742 aa6.07□□□□□ -1.44
GGPS1-208ENST00000497327 ZNF713Q8N859 430 aaPredicted RBP6.07□□□□□ -1.44
GGPS1-208ENST00000497327 C2orf69Q8N8R5 385 aa6.07□□□□□ -1.44
GGPS1-208ENST00000497327 LINC00301Q8NCQ3 95 aa6.07□□□□□ -1.44
GGPS1-208ENST00000497327 ZSWIM2Q8NEG5 633 aa6.07□□□□□ -1.44
GGPS1-208ENST00000497327 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.07□□□□□ -1.44
GGPS1-208ENST00000497327 ERCC4Q92889 916 aaPredicted RBP6.07□□□□□ -1.44
GGPS1-208ENST00000497327 RRP36Q96EU6 259 aaKnown RBP6.07□□□□□ -1.44
GGPS1-208ENST00000497327 PGBD1Q96JS3 809 aa6.07□□□□□ -1.44
GGPS1-208ENST00000497327 DRC1Q96MC2 740 aa6.07□□□□□ -1.44
GGPS1-208ENST00000497327 ZNF396Q96N95 335 aaPredicted RBP6.07□□□□□ -1.44
GGPS1-208ENST00000497327 NUP88Q99567 741 aaPredicted RBP6.07□□□□□ -1.44
GGPS1-208ENST00000497327 ZMYND12Q9H0C1 365 aa6.07□□□□□ -1.44
GGPS1-208ENST00000497327 CFAP45Q9UL16 551 aa6.07□□□□□ -1.44
GGPS1-208ENST00000497327 GIT1Q9Y2X7 761 aa6.07□□□□□ -1.44
GGPS1-208ENST00000497327 SH3BP1Q9Y3L3 701 aa6.07□□□□□ -1.44
GGPS1-208ENST00000497327 CLIC4Q9Y696 253 aa6.07□□□□□ -1.44
GGPS1-208ENST00000497327 GOLGB1Q14789 3259 aaKnown RBP6.06□□□□□ -1.44
GGPS1-208ENST00000497327 CCDC163A0A0D9SF12 145 aa6.06□□□□□ -1.44
GGPS1-208ENST00000497327 CAPN14A8MX76 684 aa6.06□□□□□ -1.44
GGPS1-208ENST00000497327 ADM5C9JUS6 153 aa6.06□□□□□ -1.44
GGPS1-208ENST00000497327 EDIL3O43854 480 aa6.06□□□□□ -1.44
GGPS1-208ENST00000497327 HIP1RO75146 1068 aa6.06□□□□□ -1.44
GGPS1-208ENST00000497327 MBD3O95983 291 aa6.06□□□□□ -1.44
GGPS1-208ENST00000497327 PRLP01236 227 aa6.06□□□□□ -1.44
GGPS1-208ENST00000497327 NCLP19338 710 aaKnown RBP6.06□□□□□ -1.44
GGPS1-208ENST00000497327 CALML3P27482 149 aa6.06□□□□□ -1.44
GGPS1-208ENST00000497327 KRT2P35908 639 aa6.06□□□□□ -1.44
GGPS1-208ENST00000497327 NLRP5P59047 1200 aa6.06□□□□□ -1.44
GGPS1-208ENST00000497327 ATP2C1P98194 919 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms