RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 PARD3BQ8TEW8 1205 aa13.26□□□□□ -0.29
CLDN12-213ENST00000496677 TRMT2BQ96GJ1 504 aaKnown RBP13.26□□□□□ -0.29
CLDN12-213ENST00000496677 FUBP3Q96I24 572 aaKnown RBP eCLIP13.26□□□□□ -0.29
CLDN12-213ENST00000496677 FNBP1Q96RU3 617 aa13.26□□□□□ -0.29
CLDN12-213ENST00000496677 MRPL45Q9BRJ2 306 aaKnown RBP13.26□□□□□ -0.29
CLDN12-213ENST00000496677 GOLPH3LQ9H4A5 285 aa13.26□□□□□ -0.29
CLDN12-213ENST00000496677 SLITRK6Q9H5Y7 841 aa13.26□□□□□ -0.29
CLDN12-213ENST00000496677 CDH9Q9ULB4 789 aa13.26□□□□□ -0.29
CLDN12-213ENST00000496677 SLC38A8A6NNN8 435 aa13.25□□□□□ -0.29
CLDN12-213ENST00000496677 MAN2B1O00754 1011 aa13.25□□□□□ -0.29
CLDN12-213ENST00000496677 PDXKO00764 312 aa13.25□□□□□ -0.29
CLDN12-213ENST00000496677 EXOC3O60645 756 aa13.25□□□□□ -0.29
CLDN12-213ENST00000496677 C4BPAP04003 597 aaKnown RBP13.25□□□□□ -0.29
CLDN12-213ENST00000496677 RPN1P04843 607 aaKnown RBP13.25□□□□□ -0.29
CLDN12-213ENST00000496677 CSH1P0DML2 217 aa13.25□□□□□ -0.29
CLDN12-213ENST00000496677 CSH2P0DML3 217 aa13.25□□□□□ -0.29
CLDN12-213ENST00000496677 MAGEA9P43362 315 aa13.25□□□□□ -0.29
CLDN12-213ENST00000496677 SYKP43405 635 aa13.25□□□□□ -0.29
CLDN12-213ENST00000496677 CASP4P49662 377 aa13.25□□□□□ -0.29
CLDN12-213ENST00000496677 MYL6P60660 151 aa13.25□□□□□ -0.29
CLDN12-213ENST00000496677 RPL10AP62906 217 aaKnown RBP13.25□□□□□ -0.29
CLDN12-213ENST00000496677 DPYDQ12882 1025 aa13.25□□□□□ -0.29
CLDN12-213ENST00000496677 MAMSTRQ6ZN01 415 aa13.25□□□□□ -0.29
CLDN12-213ENST00000496677 MON1AQ86VX9 555 aa13.25□□□□□ -0.29
CLDN12-213ENST00000496677 CMTM8Q8IZV2 173 aa13.25□□□□□ -0.29
CLDN12-213ENST00000496677 STKLD1Q8NE28 680 aa13.25□□□□□ -0.29
CLDN12-213ENST00000496677 BCO2Q9BYV7 579 aa13.25□□□□□ -0.29
CLDN12-213ENST00000496677 SCAND2PQ9GZW5 306 aaPredicted RBP13.25□□□□□ -0.29
CLDN12-213ENST00000496677 VRTNQ9H8Y1 702 aa13.25□□□□□ -0.29
CLDN12-213ENST00000496677 EXOC1Q9NV70 894 aa13.25□□□□□ -0.29
CLDN12-213ENST00000496677 ZMYM5Q9UJ78 669 aa13.25□□□□□ -0.29
CLDN12-213ENST00000496677 MRPS17Q9Y2R5 130 aaKnown RBP13.25□□□□□ -0.29
CLDN12-213ENST00000496677 PTPRZ1P23471 2315 aaPredicted RBP13.25□□□□□ -0.29
CLDN12-213ENST00000496677 TICRRQ7Z2Z1 1910 aa13.25□□□□□ -0.29
CLDN12-213ENST00000496677 NUP210Q8TEM1 1887 aaPredicted RBP13.25□□□□□ -0.29
CLDN12-213ENST00000496677 LRRIQ3A6PVS8 624 aaPredicted RBP13.24□□□□□ -0.29
CLDN12-213ENST00000496677 TADA3O75528 432 aa13.24□□□□□ -0.29
CLDN12-213ENST00000496677 RHOBTB3O94955 611 aa13.24□□□□□ -0.29
CLDN12-213ENST00000496677 VNN1O95497 513 aa13.24□□□□□ -0.29
CLDN12-213ENST00000496677 PDGFRBP09619 1106 aa13.24□□□□□ -0.29
CLDN12-213ENST00000496677 DDX6P26196 483 aaKnown RBP eCLIP13.24□□□□□ -0.29
CLDN12-213ENST00000496677 ATICP31939 592 aa13.24□□□□□ -0.29
CLDN12-213ENST00000496677 GNL1P36915 607 aaPredicted RBP13.24□□□□□ -0.29
CLDN12-213ENST00000496677 MCCD1P59942 119 aaPredicted RBP13.24□□□□□ -0.29
CLDN12-213ENST00000496677 ZNF528Q3MIS6 628 aa13.24□□□□□ -0.29
CLDN12-213ENST00000496677 WDR44Q5JSH3 913 aa13.24□□□□□ -0.29
CLDN12-213ENST00000496677 C1orf220Q5T0J3 134 aa13.24□□□□□ -0.29
CLDN12-213ENST00000496677 KRBA2Q6ZNG9 492 aa13.24□□□□□ -0.29
CLDN12-213ENST00000496677 SPATA2LQ8IUW3 424 aaPredicted RBP13.24□□□□□ -0.29
CLDN12-213ENST00000496677 MYCBPAPQ8TBZ2 947 aa13.24□□□□□ -0.29
CLDN12-213ENST00000496677 FAM3CQ92520 227 aa13.24□□□□□ -0.29
CLDN12-213ENST00000496677 NELL1Q92832 810 aa13.24□□□□□ -0.29
CLDN12-213ENST00000496677 USP13Q92995 863 aaPredicted RBP13.24□□□□□ -0.29
CLDN12-213ENST00000496677 NKD2Q969F2 451 aaPredicted RBP13.24□□□□□ -0.29
CLDN12-213ENST00000496677 SPATA17Q96L03 361 aa13.24□□□□□ -0.29
CLDN12-213ENST00000496677 SYT15Q9BQS2 421 aa13.24□□□□□ -0.29
CLDN12-213ENST00000496677 SMG9Q9H0W8 520 aaKnown RBP13.24□□□□□ -0.29
CLDN12-213ENST00000496677 FBXO4Q9UKT5 387 aa13.24□□□□□ -0.29
CLDN12-213ENST00000496677 TRAF3IP3Q9Y228 551 aa13.24□□□□□ -0.29
CLDN12-213ENST00000496677 R3HCC1Q9Y3T6 440 aaKnown RBP13.24□□□□□ -0.29
CLDN12-213ENST00000496677 ATP6V1DQ9Y5K8 247 aa13.24□□□□□ -0.29
CLDN12-213ENST00000496677 PIAS3Q9Y6X2 628 aa13.24□□□□□ -0.29
CLDN12-213ENST00000496677 FANCMQ8IYD8 2048 aa13.23□□□□□ -0.29
CLDN12-213ENST00000496677 FAM186AA6NE01 2351 aa13.23□□□□□ -0.29
CLDN12-213ENST00000496677 PATJQ8NI35 1801 aa13.23□□□□□ -0.29
CLDN12-213ENST00000496677 NCAM2O15394 837 aa13.23□□□□□ -0.29
CLDN12-213ENST00000496677 ZNF202O95125 648 aa13.23□□□□□ -0.29
CLDN12-213ENST00000496677 NR3C1P04150 777 aa13.23□□□□□ -0.29
CLDN12-213ENST00000496677 CHRNB1P11230 501 aa13.23□□□□□ -0.29
CLDN12-213ENST00000496677 PSMC1P62191 440 aaKnown RBP13.23□□□□□ -0.29
CLDN12-213ENST00000496677 DLG4P78352 724 aa13.23□□□□□ -0.29
CLDN12-213ENST00000496677 TAF12Q16514 161 aa13.23□□□□□ -0.29
CLDN12-213ENST00000496677 WDR72Q3MJ13 1102 aa13.23□□□□□ -0.29
CLDN12-213ENST00000496677 ARHGAP29Q52LW3 1261 aa13.23□□□□□ -0.29
CLDN12-213ENST00000496677 TDRD10Q5VZ19 366 aaKnown RBP13.23□□□□□ -0.29
CLDN12-213ENST00000496677 TXNDC8Q6A555 127 aa13.23□□□□□ -0.29
CLDN12-213ENST00000496677 VSTM1Q6UX27 236 aa13.23□□□□□ -0.29
CLDN12-213ENST00000496677 C4orf50Q6ZRC1 276 aa13.23□□□□□ -0.29
CLDN12-213ENST00000496677 CELF5Q8N6W0 485 aaKnown RBP13.23□□□□□ -0.29
CLDN12-213ENST00000496677 MAB21L3Q8N8X9 362 aa13.23□□□□□ -0.29
CLDN12-213ENST00000496677 FSIP1Q8NA03 581 aa13.23□□□□□ -0.29
CLDN12-213ENST00000496677 RIN3Q8TB24 985 aa13.23□□□□□ -0.29
CLDN12-213ENST00000496677 TMC2Q8TDI7 906 aa13.23□□□□□ -0.29
CLDN12-213ENST00000496677 BPIFB1Q8TDL5 484 aa13.23□□□□□ -0.29
CLDN12-213ENST00000496677 MYLPFQ96A32 169 aa13.23□□□□□ -0.29
CLDN12-213ENST00000496677 PCED1BQ96HM7 432 aa13.23□□□□□ -0.29
CLDN12-213ENST00000496677 ZFYVE19Q96K21 471 aa13.23□□□□□ -0.29
CLDN12-213ENST00000496677 CEP295NLQ96MC4 621 aa13.23□□□□□ -0.29
CLDN12-213ENST00000496677 GCNAQ96QF7 691 aa13.23□□□□□ -0.29
CLDN12-213ENST00000496677 MMS19Q96T76 1030 aa13.23□□□□□ -0.29
CLDN12-213ENST00000496677 FAM83CQ9BQN1 747 aa13.23□□□□□ -0.29
CLDN12-213ENST00000496677 CHRDQ9H2X0 955 aa13.23□□□□□ -0.29
CLDN12-213ENST00000496677 SEMA4AQ9H3S1 761 aa13.23□□□□□ -0.29
CLDN12-213ENST00000496677 SPATA6Q9NWH7 488 aaPredicted RBP13.23□□□□□ -0.29
CLDN12-213ENST00000496677 MAGEC2Q9UBF1 373 aaPredicted RBP13.23□□□□□ -0.29
CLDN12-213ENST00000496677 CCL26Q9Y258 94 aa13.23□□□□□ -0.29
CLDN12-213ENST00000496677 R4GN57 208 aa13.23□□□□□ -0.29
CLDN12-213ENST00000496677 ZNF292O60281 2723 aa13.23□□□□□ -0.29
CLDN12-213ENST00000496677 OBSL1O75147 1896 aa13.23□□□□□ -0.29
CLDN12-213ENST00000496677 KIF26AQ9ULI4 1882 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms