RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 TRIML1Q8N9V2 468 aa17.22■□□□□ 0.35
DNMT3A-215ENST00000496570 SLC35C1Q96A29 364 aa17.22■□□□□ 0.35
DNMT3A-215ENST00000496570 KXD1Q9BQD3 176 aa17.22■□□□□ 0.35
DNMT3A-215ENST00000496570 SNX25Q9H3E2 840 aa17.22■□□□□ 0.35
DNMT3A-215ENST00000496570 MMRN2Q9H8L6 949 aa17.22■□□□□ 0.35
DNMT3A-215ENST00000496570 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.22■□□□□ 0.353e-10■■■■■ 153.8
DNMT3A-215ENST00000496570 TMEM30AQ9NV96 361 aa17.22■□□□□ 0.35
DNMT3A-215ENST00000496570 CTNND2Q9UQB3 1225 aa17.22■□□□□ 0.35
DNMT3A-215ENST00000496570 GREB1Q4ZG55 1949 aa17.21■□□□□ 0.35
DNMT3A-215ENST00000496570 OBSL1O75147 1896 aa17.21■□□□□ 0.35
DNMT3A-215ENST00000496570 PTPN1P18031 435 aaKnown RBP17.21■□□□□ 0.35
DNMT3A-215ENST00000496570 CACNA2D1P54289 1103 aa17.21■□□□□ 0.35
DNMT3A-215ENST00000496570 MDH1BQ5I0G3 518 aa17.21■□□□□ 0.35
DNMT3A-215ENST00000496570 KRT39Q6A163 491 aa17.21■□□□□ 0.35
DNMT3A-215ENST00000496570 MTSS1LQ765P7 747 aa17.21■□□□□ 0.35
DNMT3A-215ENST00000496570 FILIP1Q7Z7B0 1213 aa17.21■□□□□ 0.35
DNMT3A-215ENST00000496570 CEP63Q96MT8 703 aa17.21■□□□□ 0.35
DNMT3A-215ENST00000496570 ASB16Q96NS5 453 aa17.21■□□□□ 0.35
DNMT3A-215ENST00000496570 MAGEC2Q9UBF1 373 aaPredicted RBP17.21■□□□□ 0.35
DNMT3A-215ENST00000496570 RAPGEFL1Q9UHV5 662 aa17.21■□□□□ 0.35
DNMT3A-215ENST00000496570 DENND4CQ5VZ89 1909 aa17.2■□□□□ 0.34
DNMT3A-215ENST00000496570 A8MXQ7 604 aa17.2■□□□□ 0.34
DNMT3A-215ENST00000496570 ECI2O75521 394 aa17.2■□□□□ 0.34
DNMT3A-215ENST00000496570 TADA3O75528 432 aa17.2■□□□□ 0.34
DNMT3A-215ENST00000496570 NOL4O94818 638 aa17.2■□□□□ 0.34
DNMT3A-215ENST00000496570 F11P03951 625 aa17.2■□□□□ 0.34
DNMT3A-215ENST00000496570 SRFP11831 508 aa17.2■□□□□ 0.34
DNMT3A-215ENST00000496570 BDNFP23560 247 aa17.2■□□□□ 0.34
DNMT3A-215ENST00000496570 GABRR2P28476 465 aa17.2■□□□□ 0.34
DNMT3A-215ENST00000496570 MXI1P50539 228 aa17.2■□□□□ 0.34
DNMT3A-215ENST00000496570 STX17P56962 302 aa17.2■□□□□ 0.34
DNMT3A-215ENST00000496570 NOP14P78316 857 aaKnown RBP17.2■□□□□ 0.34
DNMT3A-215ENST00000496570 PAK1Q13153 545 aa17.2■□□□□ 0.34
DNMT3A-215ENST00000496570 VEPH1Q14D04 833 aa17.2■□□□□ 0.34
DNMT3A-215ENST00000496570 IER5LQ5T953 404 aa17.2■□□□□ 0.34
DNMT3A-215ENST00000496570 C4orf50Q6ZRC1 276 aa17.2■□□□□ 0.34
DNMT3A-215ENST00000496570 PAQR9Q6ZVX9 377 aa17.2■□□□□ 0.34
DNMT3A-215ENST00000496570 B3GALNT2Q8NCR0 500 aa17.2■□□□□ 0.34
DNMT3A-215ENST00000496570 FAM200AQ8TCP9 573 aa17.2■□□□□ 0.34
DNMT3A-215ENST00000496570 RSPRY1Q96DX4 576 aa17.2■□□□□ 0.34
DNMT3A-215ENST00000496570 B3GNT5Q9BYG0 378 aa17.2■□□□□ 0.34
DNMT3A-215ENST00000496570 TRPV4Q9HBA0 871 aa17.2■□□□□ 0.34
DNMT3A-215ENST00000496570 SLC2A4RGQ9NR83 387 aa17.2■□□□□ 0.34
DNMT3A-215ENST00000496570 ARMCX3Q9UH62 379 aaPredicted RBP17.2■□□□□ 0.34
DNMT3A-215ENST00000496570 COQ4Q9Y3A0 265 aa17.2■□□□□ 0.34
DNMT3A-215ENST00000496570 KMT2EQ8IZD2 1858 aa17.2■□□□□ 0.34
DNMT3A-215ENST00000496570 COL4A3Q01955 1670 aa17.2■□□□□ 0.34
DNMT3A-215ENST00000496570 ZNF318Q5VUA4 2279 aa17.19■□□□□ 0.34
DNMT3A-215ENST00000496570 SLC38A8A6NNN8 435 aa17.19■□□□□ 0.34
DNMT3A-215ENST00000496570 NLRP12P59046 1061 aa17.19■□□□□ 0.34
DNMT3A-215ENST00000496570 RPL10AP62906 217 aaKnown RBP17.19■□□□□ 0.34
DNMT3A-215ENST00000496570 GPC5P78333 572 aa17.19■□□□□ 0.34
DNMT3A-215ENST00000496570 CYP4F8P98187 520 aa17.19■□□□□ 0.34
DNMT3A-215ENST00000496570 CYP27A1Q02318 531 aa17.19■□□□□ 0.34
DNMT3A-215ENST00000496570 INCA1Q0VD86 236 aa17.19■□□□□ 0.34
DNMT3A-215ENST00000496570 ORC1Q13415 861 aa17.19■□□□□ 0.34
DNMT3A-215ENST00000496570 MAPRE1Q15691 268 aaKnown RBP17.19■□□□□ 0.34
DNMT3A-215ENST00000496570 FRMD5Q7Z6J6 570 aa17.19■□□□□ 0.34
DNMT3A-215ENST00000496570 FBXL13Q8NEE6 735 aa17.19■□□□□ 0.34
DNMT3A-215ENST00000496570 ZSCAN18Q8TBC5 510 aaPredicted RBP17.19■□□□□ 0.34
DNMT3A-215ENST00000496570 GPT2Q8TD30 523 aa17.19■□□□□ 0.34
DNMT3A-215ENST00000496570 WHAMMQ8TF30 809 aa17.19■□□□□ 0.34
DNMT3A-215ENST00000496570 PBXIP1Q96AQ6 731 aa17.19■□□□□ 0.34
DNMT3A-215ENST00000496570 ELSPBP1Q96BH3 223 aa17.19■□□□□ 0.34
DNMT3A-215ENST00000496570 MYRFLQ96LU7 910 aa17.19■□□□□ 0.34
DNMT3A-215ENST00000496570 TWNKQ96RR1 684 aa17.19■□□□□ 0.34
DNMT3A-215ENST00000496570 ZNF518BQ9C0D4 1074 aa17.19■□□□□ 0.34
DNMT3A-215ENST00000496570 ATXN3LQ9H3M9 355 aa17.19■□□□□ 0.34
DNMT3A-215ENST00000496570 RAB20Q9NX57 234 aa17.19■□□□□ 0.34
DNMT3A-215ENST00000496570 COL4A2P08572 1712 aa17.18■□□□□ 0.34
DNMT3A-215ENST00000496570 BICDL2A1A5D9 508 aa17.18■□□□□ 0.34
DNMT3A-215ENST00000496570 KRBA1A5PL33 1030 aa17.18■□□□□ 0.34
DNMT3A-215ENST00000496570 CLDN5O00501 218 aa17.18■□□□□ 0.34
DNMT3A-215ENST00000496570 CFHP08603 1231 aa17.18■□□□□ 0.34
DNMT3A-215ENST00000496570 CSH1P0DML2 217 aa17.18■□□□□ 0.34
DNMT3A-215ENST00000496570 CSH2P0DML3 217 aa17.18■□□□□ 0.34
DNMT3A-215ENST00000496570 NPR3P17342 541 aa17.18■□□□□ 0.34
DNMT3A-215ENST00000496570 COL9A1P20849 921 aa17.18■□□□□ 0.34
DNMT3A-215ENST00000496570 VIPR2P41587 438 aa17.18■□□□□ 0.34
DNMT3A-215ENST00000496570 NDST1P52848 882 aa17.18■□□□□ 0.34
DNMT3A-215ENST00000496570 DCAF17Q5H9S7 520 aaPredicted RBP17.18■□□□□ 0.34
DNMT3A-215ENST00000496570 VSTM1Q6UX27 236 aa17.18■□□□□ 0.34
DNMT3A-215ENST00000496570 SCN4BQ8IWT1 228 aa17.18■□□□□ 0.34
DNMT3A-215ENST00000496570 CRYBG2Q8N1P7 616 aa17.18■□□□□ 0.34
DNMT3A-215ENST00000496570 SMARCD2Q92925 531 aa17.18■□□□□ 0.34
DNMT3A-215ENST00000496570 TATDN2Q93075 761 aa17.18■□□□□ 0.34
DNMT3A-215ENST00000496570 TRMT2BQ96GJ1 504 aaKnown RBP17.18■□□□□ 0.34
DNMT3A-215ENST00000496570 SPATA17Q96L03 361 aa17.18■□□□□ 0.34
DNMT3A-215ENST00000496570 NIF3L1Q9GZT8 377 aa17.18■□□□□ 0.34
DNMT3A-215ENST00000496570 WNT16Q9UBV4 365 aa17.18■□□□□ 0.34
DNMT3A-215ENST00000496570 WDFY4Q6ZS81 3184 aa17.18■□□□□ 0.34
DNMT3A-215ENST00000496570 NUP210Q8TEM1 1887 aaPredicted RBP17.18■□□□□ 0.34
DNMT3A-215ENST00000496570 STX10O60499 249 aa17.17■□□□□ 0.34
DNMT3A-215ENST00000496570 FGF19O95750 216 aa17.17■□□□□ 0.34
DNMT3A-215ENST00000496570 P4HA1P13674 534 aa17.17■□□□□ 0.34
DNMT3A-215ENST00000496570 MARSP56192 900 aaKnown RBP17.17■□□□□ 0.34
DNMT3A-215ENST00000496570 USP46P62068 366 aa17.17■□□□□ 0.34
DNMT3A-215ENST00000496570 TCERG1LQ5VWI1 586 aa17.17■□□□□ 0.34
DNMT3A-215ENST00000496570 VITQ6UXI7 678 aa17.17■□□□□ 0.34
DNMT3A-215ENST00000496570 ACOT1Q86TX2 421 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms