RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 SYNPO2Q9UMS6 1093 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 NEU2Q9Y3R4 380 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 SQORQ9Y6N5 450 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 A0A0G2JND7 137 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 FOXO6A8MYZ6 492 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 FCHO1O14526 889 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 CCNT1O60563 726 aaKnown RBP9.5□□□□□ -0.89
HPS4-217ENST00000496385 DKC1O60832 514 aaKnown RBP eCLIP9.5□□□□□ -0.89
HPS4-217ENST00000496385 GSTT2P0CG29 244 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 GSTT2BP0CG30 244 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 NAT1P18440 290 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 FDFT1P37268 417 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 VCPP55072 806 aaKnown RBP9.5□□□□□ -0.89
HPS4-217ENST00000496385 ARPC4P59998 168 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 SNAPC2Q13487 334 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 MYBPC2Q14324 1141 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 SEPT7Q16181 437 aaKnown RBP9.5□□□□□ -0.89
HPS4-217ENST00000496385 CLEC16AQ2KHT3 1053 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 EFHC1Q5JVL4 640 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 SLC2A7Q6PXP3 512 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 POTEHQ6S545 545 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 GLYCTKQ8IVS8 523 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 ZFPM1Q8IX07 1006 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 GDPD5Q8WTR4 605 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 DCPSQ96C86 337 aaKnown RBP9.5□□□□□ -0.89
HPS4-217ENST00000496385 ZDHHC15Q96MV8 337 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 MTMR9Q96QG7 549 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 TSSK1BQ9BXA7 367 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 KCNK13Q9HB14 408 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 PALMDQ9NP74 551 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 KCNK4Q9NYG8 393 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 ZNF70Q9UC06 446 aaPredicted RBP9.5□□□□□ -0.89
HPS4-217ENST00000496385 DCTN4Q9UJW0 460 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 PCDHA2Q9Y5H9 948 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 LAMB1P07942 1786 aa9.5□□□□□ -0.89
HPS4-217ENST00000496385 FUOMA2VDF0 154 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 KLF11O14901 512 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 LSM1O15116 133 aaKnown RBP9.49□□□□□ -0.89
HPS4-217ENST00000496385 CCNT2O60583 730 aaKnown RBP9.49□□□□□ -0.89
HPS4-217ENST00000496385 DLDP09622 509 aaKnown RBP9.49□□□□□ -0.89
HPS4-217ENST00000496385 CHRNB2P17787 502 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 GNA11P29992 359 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 PHBP35232 272 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 PHKA2P46019 1235 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 HSPA13P48723 471 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 BCAP31P51572 246 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 AQP4P55087 323 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 HTRA3P83110 453 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 MAPK6Q16659 721 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 KCTD19Q17RG1 926 aaPredicted RBP9.49□□□□□ -0.89
HPS4-217ENST00000496385 LDHDQ86WU2 507 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 IQCF2Q8IXL9 164 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 ZNF276Q8N554 614 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 METTL25Q8N6Q8 603 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 CCDC89Q8N998 374 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 RASGRP4Q8TDF6 673 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 ZBED3Q96IU2 234 aaPredicted RBP9.49□□□□□ -0.89
HPS4-217ENST00000496385 NLRP4Q96MN2 994 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 UNKQ9C0B0 810 aaKnown RBP9.49□□□□□ -0.89
HPS4-217ENST00000496385 TMEM39BQ9GZU3 492 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 RRN3Q9NYV6 651 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 TBC1D7Q9P0N9 293 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.49□□□□□ -0.89
HPS4-217ENST00000496385 TDRKHQ9Y2W6 561 aaKnown RBP9.49□□□□□ -0.89
HPS4-217ENST00000496385 COQ6Q9Y2Z9 468 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 CEPT1Q9Y6K0 416 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 IGSF9BQ9UPX0 1349 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 ZNF701M0R085 212 aaPredicted RBP9.49□□□□□ -0.89
HPS4-217ENST00000496385 TOMM70O94826 608 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 RFX1P22670 979 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 NR2F2P24468 414 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 GCAP28676 217 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 MAGEA4P43358 317 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 NAA20P61599 178 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 GPC5P78333 572 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 CENPCQ03188 943 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 HIC1Q14526 733 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 SGO2Q562F6 1265 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 OGFRL1Q5TC84 451 aaPredicted RBP9.49□□□□□ -0.89
HPS4-217ENST00000496385 HHIPL2Q6UWX4 724 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 TMC7Q7Z402 723 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 DNAAF5Q86Y56 855 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 RBM15BQ8NDT2 890 aaKnown RBP9.49□□□□□ -0.89
HPS4-217ENST00000496385 KRT35Q92764 455 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 BORCS5Q969J3 196 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 ARHGEF26Q96DR7 871 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 CYTH2Q99418 400 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 KLC2Q9H0B6 622 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 THAP2Q9H0W7 228 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 COG5Q9UP83 839 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 SUGT1Q9Y2Z0 365 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 TSC22D4Q9Y3Q8 395 aa9.49□□□□□ -0.89
HPS4-217ENST00000496385 A0A088AWK7 358 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 CALUO43852 315 aaPredicted RBP9.48□□□□□ -0.89
HPS4-217ENST00000496385 PTPN2P17706 415 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 ABCB4P21439 1286 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 PCSK6P29122 969 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 KCNJ1P48048 391 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 CCT8P50990 548 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 NCKAP1LP55160 1127 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms