RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 LUC7LQ9NQ29 371 aaKnown RBP9.06□□□□□ -0.96
VPS13B-206ENST00000496144 SPATA31D3P0C874 917 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 GRIK1P39086 918 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 NCKAP1LP55160 1127 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 VSNL1P62760 191 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 PRKCQQ04759 706 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 GRSF1Q12849 480 aaKnown RBP eCLIP9.06□□□□□ -0.96
VPS13B-206ENST00000496144 CAPSQ13938 189 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 MYBPC2Q14324 1141 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 TDRD10Q5VZ19 366 aaKnown RBP9.06□□□□□ -0.96
VPS13B-206ENST00000496144 C15orf39Q6ZRI6 1047 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 SPATA31D4Q6ZUB0 917 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 C11orf74Q86VG3 221 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 DAW1Q8N136 415 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 MMGT1Q8N4V1 131 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 C2orf15Q8WU43 125 aaKnown RBP9.06□□□□□ -0.96
VPS13B-206ENST00000496144 IKZF4Q9H2S9 585 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 ST7Q9NRC1 585 aa9.06□□□□□ -0.96
VPS13B-206ENST00000496144 GLRA4Q5JXX5 417 aa9.05□□□□□ -0.96
VPS13B-206ENST00000496144 ASTLQ6HA08 431 aaPredicted RBP9.05□□□□□ -0.96
VPS13B-206ENST00000496144 ZPBP2Q6X784 338 aa9.05□□□□□ -0.96
VPS13B-206ENST00000496144 HDXQ7Z353 690 aa9.05□□□□□ -0.96
VPS13B-206ENST00000496144 ZNF571Q7Z3V5 609 aaPredicted RBP9.05□□□□□ -0.96
VPS13B-206ENST00000496144 MRPL10Q7Z7H8 261 aaKnown RBP9.05□□□□□ -0.96
VPS13B-206ENST00000496144 GPR65Q8IYL9 337 aa9.05□□□□□ -0.96
VPS13B-206ENST00000496144 AUTS2Q8WXX7 1259 aa9.05□□□□□ -0.96
VPS13B-206ENST00000496144 PRKD2Q9BZL6 878 aa9.05□□□□□ -0.96
VPS13B-206ENST00000496144 DOCK5Q9H7D0 1870 aa9.05□□□□□ -0.96
VPS13B-206ENST00000496144 PI4K2BG5E9Z4 385 aa9.05□□□□□ -0.96
VPS13B-206ENST00000496144 OGTO15294 1046 aa9.05□□□□□ -0.96
VPS13B-206ENST00000496144 CYBBP04839 570 aa9.05□□□□□ -0.96
VPS13B-206ENST00000496144 PLA2G5P39877 138 aa9.05□□□□□ -0.96
VPS13B-206ENST00000496144 LHX1P48742 406 aa9.05□□□□□ -0.96
VPS13B-206ENST00000496144 FAM193AP78312 1265 aa9.05□□□□□ -0.96
VPS13B-206ENST00000496144 SPIRE2Q8WWL2 714 aa9.05□□□□□ -0.96
VPS13B-206ENST00000496144 ZNF689Q96CS4 500 aaPredicted RBP9.05□□□□□ -0.96
VPS13B-206ENST00000496144 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.05□□□□□ -0.96
VPS13B-206ENST00000496144 FNIP2Q9P278 1114 aa9.05□□□□□ -0.96
VPS13B-206ENST00000496144 BUB1O43683 1085 aa9.05□□□□□ -0.96
VPS13B-206ENST00000496144 SNRPFP62306 86 aaKnown RBP9.05□□□□□ -0.96
VPS13B-206ENST00000496144 ZBTB41Q5SVQ8 909 aa9.05□□□□□ -0.96
VPS13B-206ENST00000496144 ANO5Q75V66 913 aa9.05□□□□□ -0.96
VPS13B-206ENST00000496144 ALYREFQ86V81 257 aaKnown RBP9.05□□□□□ -0.96
VPS13B-206ENST00000496144 UCMAQ8WVF2 138 aa9.05□□□□□ -0.96
VPS13B-206ENST00000496144 WNT8BQ93098 351 aa9.05□□□□□ -0.96
VPS13B-206ENST00000496144 SIT1Q9Y3P8 196 aa9.05□□□□□ -0.96
VPS13B-206ENST00000496144 TRAV19A0A0A6YYK7 116 aa9.05□□□□□ -0.96
VPS13B-206ENST00000496144 PDE2AO00408 941 aaPredicted RBP9.05□□□□□ -0.96
VPS13B-206ENST00000496144 ZMYND10O75800 440 aa9.05□□□□□ -0.96
VPS13B-206ENST00000496144 RALAP11233 206 aa9.05□□□□□ -0.96
VPS13B-206ENST00000496144 FMO5P49326 533 aa9.05□□□□□ -0.96
VPS13B-206ENST00000496144 PTK2Q05397 1052 aa9.05□□□□□ -0.96
VPS13B-206ENST00000496144 MEI1Q5TIA1 1274 aa9.05□□□□□ -0.96
VPS13B-206ENST00000496144 GPR149Q86SP6 731 aa9.05□□□□□ -0.96
VPS13B-206ENST00000496144 TRPM5Q9NZQ8 1165 aa9.05□□□□□ -0.96
VPS13B-206ENST00000496144 PCDHB8Q9UN66 801 aa9.05□□□□□ -0.96
VPS13B-206ENST00000496144 MAPK13O15264 365 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 FAM189BP81408 668 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 MBTD1Q05BQ5 628 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 TCERG1LQ5VWI1 586 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 C12orf56Q8IXR9 622 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 OR6B3Q8NGW1 331 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 DEPDC1BQ8WUY9 529 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 INTS2Q9H0H0 1204 aaKnown RBP9.04□□□□□ -0.96
VPS13B-206ENST00000496144 ZBP1Q9H171 429 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 CDH7Q9ULB5 785 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 PALMO75781 387 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 MBTPS1Q14703 1052 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 MARCH8Q5T0T0 291 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 OLIG1Q8TAK6 271 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 ZBTB10Q96DT7 871 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 SLITRK1Q96PX8 696 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 PACSIN1Q9BY11 444 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 PCDHGC5Q9Y5F6 944 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 KIAA1217Q5T5P2 1943 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 KAT6AQ92794 2004 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 CES2O00748 559 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 BMP1P13497 986 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 TCP1P17987 556 aaKnown RBP9.04□□□□□ -0.96
VPS13B-206ENST00000496144 ARF4P18085 180 aaPredicted RBP9.04□□□□□ -0.96
VPS13B-206ENST00000496144 GJB7Q6PEY0 223 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 CMASQ8NFW8 434 aaPredicted RBP9.04□□□□□ -0.96
VPS13B-206ENST00000496144 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.04□□□□□ -0.96
VPS13B-206ENST00000496144 COG1Q8WTW3 980 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 MCRS1Q96EZ8 462 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 TNIP3Q96KP6 325 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 DDX50Q9BQ39 737 aaKnown RBP9.04□□□□□ -0.96
VPS13B-206ENST00000496144 ST6GALNAC4Q9H4F1 302 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 DPP3Q9NY33 737 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 GRID2IPA4D2P6 1211 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 CYP3A5P20815 502 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 ARL2P36404 184 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 ERVFC1P60507 584 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 ZP2Q05996 745 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 DMWDQ09019 674 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 DSC3Q14574 896 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 IER2Q9BTL4 223 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 DERAQ9Y315 318 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 HCFC2Q9Y5Z7 792 aa9.04□□□□□ -0.96
VPS13B-206ENST00000496144 A0A087X0T9 212 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms