RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 JOSD2Q8TAC2 188 aa11.65□□□□□ -0.54
CMSS1-208ENST00000496116 HAUS1Q96CS2 278 aa11.65□□□□□ -0.54
CMSS1-208ENST00000496116 SLC10A4Q96EP9 437 aa11.65□□□□□ -0.54
CMSS1-208ENST00000496116 HPDLQ96IR7 371 aa11.65□□□□□ -0.54
CMSS1-208ENST00000496116 CPB2Q96IY4 423 aa11.65□□□□□ -0.54
CMSS1-208ENST00000496116 L3MBTL3Q96JM7 780 aaPredicted RBP11.65□□□□□ -0.54
CMSS1-208ENST00000496116 C9orf72Q96LT7 481 aa11.65□□□□□ -0.54
CMSS1-208ENST00000496116 PWWP2AQ96N64 755 aa11.65□□□□□ -0.54
CMSS1-208ENST00000496116 CPXM1Q96SM3 734 aa11.65□□□□□ -0.54
CMSS1-208ENST00000496116 SDCBP2Q9H190 292 aa11.65□□□□□ -0.54
CMSS1-208ENST00000496116 ZWILCHQ9H900 591 aa11.65□□□□□ -0.54
CMSS1-208ENST00000496116 ACTR5Q9H9F9 607 aaPredicted RBP11.65□□□□□ -0.54
CMSS1-208ENST00000496116 SPON1Q9HCB6 807 aa11.65□□□□□ -0.54
CMSS1-208ENST00000496116 METTL5Q9NRN9 209 aaKnown RBP11.65□□□□□ -0.54
CMSS1-208ENST00000496116 LGALS13Q9UHV8 139 aa11.65□□□□□ -0.54
CMSS1-208ENST00000496116 CYTH4Q9UIA0 394 aa11.65□□□□□ -0.54
CMSS1-208ENST00000496116 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.65□□□□□ -0.54
CMSS1-208ENST00000496116 C2CD2Q9Y426 696 aa11.65□□□□□ -0.54
CMSS1-208ENST00000496116 TMEM120BA0PK00 339 aa11.65□□□□□ -0.55
CMSS1-208ENST00000496116 STRNO43815 780 aa11.65□□□□□ -0.55
CMSS1-208ENST00000496116 CSDE1O75534 798 aaKnown RBP11.65□□□□□ -0.55
CMSS1-208ENST00000496116 MICAL2O94851 1124 aa11.65□□□□□ -0.55
CMSS1-208ENST00000496116 VTNP04004 478 aa11.65□□□□□ -0.55
CMSS1-208ENST00000496116 VIMP08670 466 aaKnown RBP11.65□□□□□ -0.55
CMSS1-208ENST00000496116 GABRB2P47870 512 aa11.65□□□□□ -0.55
CMSS1-208ENST00000496116 SLC10A6Q3KNW5 377 aa11.65□□□□□ -0.55
CMSS1-208ENST00000496116 MTHFD1LQ6UB35 978 aa11.65□□□□□ -0.55
CMSS1-208ENST00000496116 PRUNE1Q86TP1 453 aa11.65□□□□□ -0.55
CMSS1-208ENST00000496116 AFG1LQ8WV93 481 aa11.65□□□□□ -0.55
CMSS1-208ENST00000496116 ACSF2Q96CM8 615 aaPredicted RBP11.65□□□□□ -0.55
CMSS1-208ENST00000496116 HEXIM2Q96MH2 286 aaKnown RBP11.65□□□□□ -0.55
CMSS1-208ENST00000496116 ACAP3Q96P50 834 aa11.65□□□□□ -0.55
CMSS1-208ENST00000496116 PPP1R16BQ96T49 567 aa11.65□□□□□ -0.55
CMSS1-208ENST00000496116 SAYSD1Q9NPB0 183 aa11.65□□□□□ -0.55
CMSS1-208ENST00000496116 ASNSD1Q9NWL6 643 aa11.65□□□□□ -0.55
CMSS1-208ENST00000496116 BARX2Q9UMQ3 279 aaPredicted RBP11.65□□□□□ -0.55
CMSS1-208ENST00000496116 SHOC2Q9UQ13 582 aa11.65□□□□□ -0.55
CMSS1-208ENST00000496116 ACTL7BQ9Y614 415 aa11.65□□□□□ -0.55
CMSS1-208ENST00000496116 CAPN7Q9Y6W3 813 aa11.65□□□□□ -0.55
CMSS1-208ENST00000496116 PLXNB2O15031 1838 aa11.64□□□□□ -0.55
CMSS1-208ENST00000496116 RBM47A0AV96 593 aaKnown RBP11.64□□□□□ -0.55
CMSS1-208ENST00000496116 C3orf70A6NLC5 250 aaPredicted RBP11.64□□□□□ -0.55
CMSS1-208ENST00000496116 H3BRB1 525 aa11.64□□□□□ -0.55
CMSS1-208ENST00000496116 STAU1O95793 577 aaKnown RBP11.64□□□□□ -0.55
CMSS1-208ENST00000496116 IFNB1P01574 187 aa11.64□□□□□ -0.55
CMSS1-208ENST00000496116 ERBB2P04626 1255 aa11.64□□□□□ -0.55
CMSS1-208ENST00000496116 ZNF286BP0CG31 522 aa11.64□□□□□ -0.55
CMSS1-208ENST00000496116 KDELR1P24390 212 aa11.64□□□□□ -0.55
CMSS1-208ENST00000496116 IFNAR2P48551 515 aa11.64□□□□□ -0.55
CMSS1-208ENST00000496116 RBP5P82980 135 aa11.64□□□□□ -0.55
CMSS1-208ENST00000496116 MYO1EQ12965 1108 aa11.64□□□□□ -0.55
CMSS1-208ENST00000496116 NR1H3Q13133 447 aa11.64□□□□□ -0.55
CMSS1-208ENST00000496116 SMTNL2Q2TAL5 461 aa11.64□□□□□ -0.55
CMSS1-208ENST00000496116 GJC2Q5T442 439 aaPredicted RBP11.64□□□□□ -0.55
CMSS1-208ENST00000496116 LDLRAD1Q5T700 205 aa11.64□□□□□ -0.55
CMSS1-208ENST00000496116 CYP4F22Q6NT55 531 aa11.64□□□□□ -0.55
CMSS1-208ENST00000496116 BBS12Q6ZW61 710 aa11.64□□□□□ -0.55
CMSS1-208ENST00000496116 CENPUQ71F23 418 aa11.64□□□□□ -0.55
CMSS1-208ENST00000496116 ZNF467Q7Z7K2 595 aaPredicted RBP11.64□□□□□ -0.55
CMSS1-208ENST00000496116 GLIS1Q8NBF1 620 aa11.64□□□□□ -0.55
CMSS1-208ENST00000496116 KCTD6Q8NC69 237 aa11.64□□□□□ -0.55
CMSS1-208ENST00000496116 CXorf38Q8TB03 319 aa11.64□□□□□ -0.55
CMSS1-208ENST00000496116 SLC35B2Q8TB61 432 aa11.64□□□□□ -0.55
CMSS1-208ENST00000496116 TWNKQ96RR1 684 aa11.64□□□□□ -0.55
CMSS1-208ENST00000496116 TMEM121Q9BTD3 319 aa11.64□□□□□ -0.55
CMSS1-208ENST00000496116 ELOVL4Q9GZR5 314 aa11.64□□□□□ -0.55
CMSS1-208ENST00000496116 TUT1Q9H6E5 874 aaKnown RBP11.64□□□□□ -0.55
CMSS1-208ENST00000496116 KCNK9Q9NPC2 374 aa11.64□□□□□ -0.55
CMSS1-208ENST00000496116 CTNNAL1Q9UBT7 734 aa11.64□□□□□ -0.55
CMSS1-208ENST00000496116 TJP2Q9UDY2 1190 aa11.64□□□□□ -0.55
CMSS1-208ENST00000496116 KIAA1257Q9ULG3 409 aa11.64□□□□□ -0.55
CMSS1-208ENST00000496116 AGAP1Q9UPQ3 857 aa11.64□□□□□ -0.55
CMSS1-208ENST00000496116 EXOC1LA0A1B0GW35 172 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 CST8O60676 142 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 ZSCAN5DPP0CG00 497 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 BRAFP15056 766 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 PECAM1P16284 738 aaPredicted RBP11.63□□□□□ -0.55
CMSS1-208ENST00000496116 GJA5P36382 358 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 GPD2P43304 727 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 DYNLT1P63172 113 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 OTUD4Q01804 1114 aaKnown RBP11.63□□□□□ -0.55
CMSS1-208ENST00000496116 INCA1Q0VD86 236 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 ORC1Q13415 861 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 ITIH4Q14624 930 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 KCNT1Q5JUK3 1230 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 VSTM1Q6UX27 236 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 ARHGEF18Q6ZSZ5 1173 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 APBB1IPQ7Z5R6 666 aaPredicted RBP11.63□□□□□ -0.55
CMSS1-208ENST00000496116 ZNF410Q86VK4 478 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 TAX1BP1Q86VP1 789 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 PACS2Q86VP3 889 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 LRRC34Q8IZ02 419 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 EMC1Q8N766 993 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 ACTL9Q8TC94 416 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 MCRS1Q96EZ8 462 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 C16orf70Q9BSU1 422 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 PPCSQ9HAB8 311 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.63□□□□□ -0.55
CMSS1-208ENST00000496116 DPP3Q9NY33 737 aa11.63□□□□□ -0.55
CMSS1-208ENST00000496116 HMGXB4Q9UGU5 601 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms