RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 SMTNL1A8MU46 457 aa12.7□□□□□ -0.38
APTX-233ENST00000496030 PRKCSHP14314 528 aaPredicted RBP12.7□□□□□ -0.38
APTX-233ENST00000496030 ATF2P15336 505 aa12.7□□□□□ -0.38
APTX-233ENST00000496030 PON1P27169 355 aa12.7□□□□□ -0.38
APTX-233ENST00000496030 CDR1P51861 262 aa12.7□□□□□ -0.38
APTX-233ENST00000496030 COPB1P53618 953 aaKnown RBP12.7□□□□□ -0.38
APTX-233ENST00000496030 APBA1Q02410 837 aa12.7□□□□□ -0.38
APTX-233ENST00000496030 INCA1Q0VD86 236 aa12.7□□□□□ -0.38
APTX-233ENST00000496030 LRMPQ12912 555 aa12.7□□□□□ -0.38
APTX-233ENST00000496030 MTMR3Q13615 1198 aa12.7□□□□□ -0.38
APTX-233ENST00000496030 WDR44Q5JSH3 913 aa12.7□□□□□ -0.38
APTX-233ENST00000496030 INTS6LQ5JSJ4 861 aaKnown RBP12.7□□□□□ -0.38
APTX-233ENST00000496030 ANKRD54Q6NXT1 300 aa12.7□□□□□ -0.38
APTX-233ENST00000496030 ARHGEF19Q8IW93 802 aa12.7□□□□□ -0.38
APTX-233ENST00000496030 TCEAL8Q8IYN2 117 aa12.7□□□□□ -0.38
APTX-233ENST00000496030 C12orf76Q8N812 135 aaPredicted RBP12.7□□□□□ -0.38
APTX-233ENST00000496030 FAM200AQ8TCP9 573 aa12.7□□□□□ -0.38
APTX-233ENST00000496030 HDAC7Q8WUI4 952 aa12.7□□□□□ -0.38
APTX-233ENST00000496030 KAT5Q92993 513 aa12.7□□□□□ -0.38
APTX-233ENST00000496030 TWNKQ96RR1 684 aa12.7□□□□□ -0.38
APTX-233ENST00000496030 IMPG2Q9BZV3 1241 aa12.7□□□□□ -0.38
APTX-233ENST00000496030 VPS16Q9H269 839 aa12.7□□□□□ -0.38
APTX-233ENST00000496030 DPEP3Q9H4B8 488 aa12.7□□□□□ -0.38
APTX-233ENST00000496030 HMGXB4Q9UGU5 601 aa12.7□□□□□ -0.38
APTX-233ENST00000496030 AFF4Q9UHB7 1163 aaKnown RBP12.7□□□□□ -0.38
APTX-233ENST00000496030 FSD2A1L4K1 749 aa12.69□□□□□ -0.38
APTX-233ENST00000496030 MTMR11A4FU01 709 aa12.69□□□□□ -0.38
APTX-233ENST00000496030 C2CD4DB7Z1M9 353 aa12.69□□□□□ -0.38
APTX-233ENST00000496030 PI15O43692 258 aa12.69□□□□□ -0.38
APTX-233ENST00000496030 ASGR2P07307 311 aa12.69□□□□□ -0.38
APTX-233ENST00000496030 P4HA1P13674 534 aa12.69□□□□□ -0.38
APTX-233ENST00000496030 ACO1P21399 889 aaKnown RBP12.69□□□□□ -0.38
APTX-233ENST00000496030 PCSK1P29120 753 aa12.69□□□□□ -0.38
APTX-233ENST00000496030 CUL2Q13617 745 aa12.69□□□□□ -0.38
APTX-233ENST00000496030 SLC39A12Q504Y0 691 aa12.69□□□□□ -0.38
APTX-233ENST00000496030 CWF19L1Q69YN2 538 aaKnown RBP12.69□□□□□ -0.38
APTX-233ENST00000496030 TRIM65Q6PJ69 517 aa12.69□□□□□ -0.38
APTX-233ENST00000496030 GBP6Q6ZN66 633 aa12.69□□□□□ -0.38
APTX-233ENST00000496030 UBALD2Q8IYN6 164 aa12.69□□□□□ -0.38
APTX-233ENST00000496030 CRYBG2Q8N1P7 616 aa12.69□□□□□ -0.38
APTX-233ENST00000496030 TTC9BQ8N6N2 239 aa12.69□□□□□ -0.38
APTX-233ENST00000496030 ATAD1Q8NBU5 361 aa12.69□□□□□ -0.38
APTX-233ENST00000496030 CCDC150Q8NCX0 1101 aa12.69□□□□□ -0.38
APTX-233ENST00000496030 OR6B3Q8NGW1 331 aa12.69□□□□□ -0.38
APTX-233ENST00000496030 CASP10Q92851 521 aa12.69□□□□□ -0.38
APTX-233ENST00000496030 ZNF707Q96C28 371 aaPredicted RBP12.69□□□□□ -0.38
APTX-233ENST00000496030 KREMEN1Q96MU8 473 aa12.69□□□□□ -0.38
APTX-233ENST00000496030 SYT15Q9BQS2 421 aa12.69□□□□□ -0.38
APTX-233ENST00000496030 ELOVL4Q9GZR5 314 aa12.69□□□□□ -0.38
APTX-233ENST00000496030 SNX25Q9H3E2 840 aa12.69□□□□□ -0.38
APTX-233ENST00000496030 TSPY26PQ9H489 355 aa12.69□□□□□ -0.38
APTX-233ENST00000496030 PLEKHA4Q9H4M7 779 aa12.69□□□□□ -0.38
APTX-233ENST00000496030 MAN1C1Q9NR34 630 aa12.69□□□□□ -0.38
APTX-233ENST00000496030 GCNT4Q9P109 453 aa12.69□□□□□ -0.38
APTX-233ENST00000496030 GTF3C4Q9UKN8 822 aa12.69□□□□□ -0.38
APTX-233ENST00000496030 CDH9Q9ULB4 789 aa12.69□□□□□ -0.38
APTX-233ENST00000496030 MAFFQ9ULX9 164 aa12.69□□□□□ -0.38
APTX-233ENST00000496030 LGALS16A8MUM7 142 aa12.68□□□□□ -0.38
APTX-233ENST00000496030 A8MXQ7 604 aa12.68□□□□□ -0.38
APTX-233ENST00000496030 CILPO75339 1184 aa12.68□□□□□ -0.38
APTX-233ENST00000496030 RFPL2O75678 378 aa12.68□□□□□ -0.38
APTX-233ENST00000496030 ZMYND10O75800 440 aa12.68□□□□□ -0.38
APTX-233ENST00000496030 CPB1P15086 417 aa12.68□□□□□ -0.38
APTX-233ENST00000496030 PTPN1P18031 435 aaKnown RBP12.68□□□□□ -0.38
APTX-233ENST00000496030 CD58P19256 250 aa12.68□□□□□ -0.38
APTX-233ENST00000496030 NDST1P52848 882 aa12.68□□□□□ -0.38
APTX-233ENST00000496030 PSMC1P62191 440 aaKnown RBP12.68□□□□□ -0.38
APTX-233ENST00000496030 ADCY1Q08828 1119 aa12.68□□□□□ -0.38
APTX-233ENST00000496030 CETN1Q12798 172 aa12.68□□□□□ -0.38
APTX-233ENST00000496030 DUSP4Q13115 394 aa12.68□□□□□ -0.38
APTX-233ENST00000496030 ORC1Q13415 861 aa12.68□□□□□ -0.38
APTX-233ENST00000496030 EXOC3L4Q17RC7 722 aa12.68□□□□□ -0.38
APTX-233ENST00000496030 UVSSAQ2YD98 709 aa12.68□□□□□ -0.38
APTX-233ENST00000496030 GJB7Q6PEY0 223 aa12.68□□□□□ -0.38
APTX-233ENST00000496030 PAQR9Q6ZVX9 377 aa12.68□□□□□ -0.38
APTX-233ENST00000496030 RRAGAQ7L523 313 aa12.68□□□□□ -0.38
APTX-233ENST00000496030 UNC93AQ86WB7 457 aa12.68□□□□□ -0.38
APTX-233ENST00000496030 KIAA2013Q8IYS2 634 aa12.68□□□□□ -0.38
APTX-233ENST00000496030 MYCBPAPQ8TBZ2 947 aa12.68□□□□□ -0.38
APTX-233ENST00000496030 NAP1L5Q96NT1 182 aaPredicted RBP12.68□□□□□ -0.38
APTX-233ENST00000496030 NT5C1BQ96P26 610 aa12.68□□□□□ -0.38
APTX-233ENST00000496030 PGLYRP2Q96PD5 576 aa12.68□□□□□ -0.38
APTX-233ENST00000496030 POMKQ9H5K3 350 aa12.68□□□□□ -0.38
APTX-233ENST00000496030 CISHQ9NSE2 258 aa12.68□□□□□ -0.38
APTX-233ENST00000496030 DZANK1Q9NVP4 752 aa12.68□□□□□ -0.38
APTX-233ENST00000496030 AJAP1Q9UKB5 411 aaPredicted RBP12.68□□□□□ -0.38
APTX-233ENST00000496030 SIK3Q9Y2K2 1263 aa12.68□□□□□ -0.38
APTX-233ENST00000496030 SLC27A5Q9Y2P5 690 aa12.68□□□□□ -0.38
APTX-233ENST00000496030 PTPRDP23468 1912 aa12.68□□□□□ -0.38
APTX-233ENST00000496030 BAHCC1Q9P281 2608 aa12.68□□□□□ -0.38
APTX-233ENST00000496030 NOTCH4Q99466 2003 aa12.67□□□□□ -0.38
APTX-233ENST00000496030 CHD8Q9HCK8 2581 aa12.67□□□□□ -0.38
APTX-233ENST00000496030 BECN2A8MW95 431 aa12.67□□□□□ -0.38
APTX-233ENST00000496030 RNF225M0QZC1 329 aaPredicted RBP12.67□□□□□ -0.38
APTX-233ENST00000496030 TEX33O43247 280 aa12.67□□□□□ -0.38
APTX-233ENST00000496030 HOXB8P17481 243 aaPredicted RBP12.67□□□□□ -0.38
APTX-233ENST00000496030 CDK11BP21127 795 aaKnown RBP12.67□□□□□ -0.38
APTX-233ENST00000496030 CLCN5P51795 746 aa12.67□□□□□ -0.38
APTX-233ENST00000496030 RAD23BP54727 409 aa12.67□□□□□ -0.38
APTX-233ENST00000496030 TSPY1Q01534 308 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms