RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 EXOC3L4Q17RC7 722 aa20.69■□□□□ 0.9
HDAC4-212ENST00000495497 TRIM65Q6PJ69 517 aa20.69■□□□□ 0.9
HDAC4-212ENST00000495497 CYP26C1Q6V0L0 522 aa20.69■□□□□ 0.9
HDAC4-212ENST00000495497 C4orf50Q6ZRC1 276 aa20.69■□□□□ 0.9
HDAC4-212ENST00000495497 SCN4BQ8IWT1 228 aa20.69■□□□□ 0.9
HDAC4-212ENST00000495497 CRYBG2Q8N1P7 616 aa20.69■□□□□ 0.9
HDAC4-212ENST00000495497 UBR7Q8N806 425 aa20.69■□□□□ 0.9
HDAC4-212ENST00000495497 TNIP3Q96KP6 325 aa20.69■□□□□ 0.9
HDAC4-212ENST00000495497 ZNF512Q96ME7 567 aaPredicted RBP20.69■□□□□ 0.9
HDAC4-212ENST00000495497 NECTIN4Q96NY8 510 aa20.69■□□□□ 0.9
HDAC4-212ENST00000495497 CORO1BQ9BR76 489 aa20.69■□□□□ 0.9
HDAC4-212ENST00000495497 MED10Q9BTT4 135 aa20.69■□□□□ 0.9
HDAC4-212ENST00000495497 NT5C1AQ9BXI3 368 aa20.69■□□□□ 0.9
HDAC4-212ENST00000495497 ZNF518BQ9C0D4 1074 aa20.69■□□□□ 0.9
HDAC4-212ENST00000495497 WDR6Q9NNW5 1121 aaKnown RBP20.69■□□□□ 0.9
HDAC4-212ENST00000495497 FAM49BQ9NUQ9 324 aa20.69■□□□□ 0.9
HDAC4-212ENST00000495497 HSFX1Q9UBD0 423 aa20.69■□□□□ 0.9
HDAC4-212ENST00000495497 LIMA1Q9UHB6 759 aaKnown RBP20.69■□□□□ 0.9
HDAC4-212ENST00000495497 BECN2A8MW95 431 aa20.68■□□□□ 0.9
HDAC4-212ENST00000495497 POU2F2P09086 479 aa20.68■□□□□ 0.9
HDAC4-212ENST00000495497 CCDC130P13994 396 aa20.68■□□□□ 0.9
HDAC4-212ENST00000495497 PTPN2P17706 415 aa20.68■□□□□ 0.9
HDAC4-212ENST00000495497 TBXAS1P24557 533 aaPredicted RBP20.68■□□□□ 0.9
HDAC4-212ENST00000495497 EPHB3P54753 998 aa20.68■□□□□ 0.9
HDAC4-212ENST00000495497 KCNMA1Q12791 1236 aa20.68■□□□□ 0.9
HDAC4-212ENST00000495497 CFAP221Q4G0U5 840 aa20.68■□□□□ 0.9
HDAC4-212ENST00000495497 PAQR9Q6ZVX9 377 aa20.68■□□□□ 0.9
HDAC4-212ENST00000495497 LUZP1Q86V48 1076 aa20.68■□□□□ 0.9
HDAC4-212ENST00000495497 FAM200AQ8TCP9 573 aa20.68■□□□□ 0.9
HDAC4-212ENST00000495497 FUBP3Q96I24 572 aaKnown RBP eCLIP20.68■□□□□ 0.9
HDAC4-212ENST00000495497 RPGRIP1Q96KN7 1286 aa20.68■□□□□ 0.9
HDAC4-212ENST00000495497 KREMEN1Q96MU8 473 aa20.68■□□□□ 0.9
HDAC4-212ENST00000495497 PHF7Q9BWX1 381 aaPredicted RBP20.68■□□□□ 0.9
HDAC4-212ENST00000495497 ABCB6Q9NP58 842 aa20.68■□□□□ 0.9
HDAC4-212ENST00000495497 UBE2TQ9NPD8 197 aaPredicted RBP20.68■□□□□ 0.9
HDAC4-212ENST00000495497 CLUHO75153 1309 aa20.68■□□□□ 0.9
HDAC4-212ENST00000495497 C5orf42Q9H799 3197 aa20.67■□□□□ 0.9
HDAC4-212ENST00000495497 GTPBP10A4D1E9 387 aaKnown RBP20.67■□□□□ 0.9
HDAC4-212ENST00000495497 NRG2O14511 850 aaPredicted RBP20.67■□□□□ 0.9
HDAC4-212ENST00000495497 RHOP08100 348 aa20.67■□□□□ 0.9
HDAC4-212ENST00000495497 ACO1P21399 889 aaKnown RBP20.67■□□□□ 0.9
HDAC4-212ENST00000495497 RAD23BP54727 409 aa20.67■□□□□ 0.9
HDAC4-212ENST00000495497 PLD1Q13393 1074 aa20.67■□□□□ 0.9
HDAC4-212ENST00000495497 APTXQ7Z2E3 356 aaKnown RBP20.67■□□□□ 0.9
HDAC4-212ENST00000495497 ELMOD1Q8N336 334 aa20.67■□□□□ 0.9
HDAC4-212ENST00000495497 SLC4A11Q8NBS3 891 aa20.67■□□□□ 0.9
HDAC4-212ENST00000495497 SLC2A14Q8TDB8 520 aa20.67■□□□□ 0.9
HDAC4-212ENST00000495497 TMEM176AQ96HP8 235 aa20.67■□□□□ 0.9
HDAC4-212ENST00000495497 HEXIM2Q96MH2 286 aaKnown RBP20.67■□□□□ 0.9
HDAC4-212ENST00000495497 SIX2Q9NPC8 291 aa20.67■□□□□ 0.9
HDAC4-212ENST00000495497 TMEM30AQ9NV96 361 aa20.67■□□□□ 0.9
HDAC4-212ENST00000495497 AJAP1Q9UKB5 411 aaPredicted RBP20.67■□□□□ 0.9
HDAC4-212ENST00000495497 PCDHB4Q9Y5E5 795 aa20.67■□□□□ 0.9
HDAC4-212ENST00000495497 CALCAP01258 141 aa20.66■□□□□ 0.9
HDAC4-212ENST00000495497 ADORA2BP29275 332 aa20.66■□□□□ 0.9
HDAC4-212ENST00000495497 GRIK1P39086 918 aa20.66■□□□□ 0.9
HDAC4-212ENST00000495497 GCNT1Q02742 428 aa20.66■□□□□ 0.9
HDAC4-212ENST00000495497 MTMR3Q13615 1198 aa20.66■□□□□ 0.9
HDAC4-212ENST00000495497 SLC5A9Q2M3M2 681 aa20.66■□□□□ 0.9
HDAC4-212ENST00000495497 PABPC1LQ4VXU2 614 aaKnown RBP20.66■□□□□ 0.9
HDAC4-212ENST00000495497 IQCEQ6IPM2 695 aa20.66■□□□□ 0.9
HDAC4-212ENST00000495497 DPY19L2P1Q6NXN4 242 aa20.66■□□□□ 0.9
HDAC4-212ENST00000495497 LRSAM1Q6UWE0 723 aa20.66■□□□□ 0.9
HDAC4-212ENST00000495497 GET4Q7L5D6 327 aaPredicted RBP20.66■□□□□ 0.9
HDAC4-212ENST00000495497 DNAJB7Q7Z6W7 309 aaPredicted RBP20.66■□□□□ 0.9
HDAC4-212ENST00000495497 FAM35AQ86V20 835 aa20.66■□□□□ 0.9
HDAC4-212ENST00000495497 FUKQ8N0W3 1084 aa20.66■□□□□ 0.9
HDAC4-212ENST00000495497 ANKRD20A12PQ8NF67 263 aa20.66■□□□□ 0.9
HDAC4-212ENST00000495497 ITFG1Q8TB96 612 aa20.66■□□□□ 0.9
HDAC4-212ENST00000495497 ADAMTS19Q8TE59 1207 aa20.66■□□□□ 0.9
HDAC4-212ENST00000495497 TCEAL4Q96EI5 215 aa20.66■□□□□ 0.9
HDAC4-212ENST00000495497 ZNF334Q9HCZ1 680 aaPredicted RBP20.66■□□□□ 0.9
HDAC4-212ENST00000495497 C2orf16Q68DN1 1984 aa20.66■□□□□ 0.9
HDAC4-212ENST00000495497 TCF20Q9UGU0 1960 aaKnown RBP20.66■□□□□ 0.9
HDAC4-212ENST00000495497 RNF225M0QZC1 329 aaPredicted RBP20.65■□□□□ 0.9
HDAC4-212ENST00000495497 TPM2P07951 284 aa20.65■□□□□ 0.9
HDAC4-212ENST00000495497 MYL4P12829 197 aa20.65■□□□□ 0.9
HDAC4-212ENST00000495497 FSHRP23945 695 aa20.65■□□□□ 0.9
HDAC4-212ENST00000495497 CCR2P41597 374 aa20.65■□□□□ 0.9
HDAC4-212ENST00000495497 MAGEA11P43364 429 aa20.65■□□□□ 0.9
HDAC4-212ENST00000495497 KLK7P49862 253 aa20.65■□□□□ 0.9
HDAC4-212ENST00000495497 YWHAEP62258 255 aaKnown RBP20.65■□□□□ 0.9
HDAC4-212ENST00000495497 RPL10AP62906 217 aaKnown RBP20.65■□□□□ 0.9
HDAC4-212ENST00000495497 ZP2Q05996 745 aa20.65■□□□□ 0.9
HDAC4-212ENST00000495497 TMEM270Q6UE05 265 aa20.65■□□□□ 0.9
HDAC4-212ENST00000495497 ADHFE1Q8IWW8 467 aa20.65■□□□□ 0.9
HDAC4-212ENST00000495497 TTC39CQ8N584 583 aa20.65■□□□□ 0.9
HDAC4-212ENST00000495497 PSMG2Q969U7 264 aa20.65■□□□□ 0.9
HDAC4-212ENST00000495497 CYFIP2Q96F07 1278 aa20.65■□□□□ 0.9
HDAC4-212ENST00000495497 LSM14BQ9BX40 385 aaKnown RBP20.65■□□□□ 0.9
HDAC4-212ENST00000495497 LRRC3Q9BY71 257 aa20.65■□□□□ 0.9
HDAC4-212ENST00000495497 TSPY26PQ9H489 355 aa20.65■□□□□ 0.9
HDAC4-212ENST00000495497 APEX2Q9UBZ4 518 aa20.65■□□□□ 0.9
HDAC4-212ENST00000495497 LRRC10BA6NIK2 292 aa20.64■□□□□ 0.89
HDAC4-212ENST00000495497 C2CD4DB7Z1M9 353 aa20.64■□□□□ 0.89
HDAC4-212ENST00000495497 F8VP50 259 aa20.64■□□□□ 0.89
HDAC4-212ENST00000495497 GJA1P17302 382 aa20.64■□□□□ 0.89
HDAC4-212ENST00000495497 VEPH1Q14D04 833 aa20.64■□□□□ 0.89
HDAC4-212ENST00000495497 ARHGAP44Q17R89 818 aa20.64■□□□□ 0.89
HDAC4-212ENST00000495497 PPP1R26Q5T8A7 1209 aaPredicted RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms