RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 BGNP21810 368 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 GCKP35557 465 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 MMP14P50281 582 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 ARL4CP56559 192 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 BCAR1P56945 870 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 TAF1BQ53T94 588 aaPredicted RBP14.11□□□□□ -0.15
GPC1-209ENST00000495100 ATXN2LQ8WWM7 1075 aaKnown RBP14.11□□□□□ -0.15
GPC1-209ENST00000495100 STMN2Q93045 179 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 RNF34Q969K3 372 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 TRIM11Q96F44 468 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 CDHR1Q96JP9 859 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 KIAA1586Q9HCI6 787 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 SLC17A6Q9P2U8 582 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 FNDC3AQ9Y2H6 1198 aaKnown RBP14.11□□□□□ -0.15
GPC1-209ENST00000495100 ADAMTSL1Q8N6G6 1762 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 PYGBP11216 843 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 ANXA13P27216 316 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 ELK3P41970 407 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 COPS2P61201 443 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 PDE1BQ01064 536 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 CLUL1Q15846 466 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 ZC3H12AQ5D1E8 599 aaKnown RBP14.11□□□□□ -0.15
GPC1-209ENST00000495100 VSTM1Q6UX27 236 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 SEPT1Q8WYJ6 367 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 PAFAH2Q99487 392 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 NIF3L1Q9GZT8 377 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 FSCN2O14926 492 aa14.1□□□□□ -0.15
GPC1-209ENST00000495100 P4HA2O15460 535 aa14.1□□□□□ -0.15
GPC1-209ENST00000495100 RSPH3Q86UC2 560 aa14.1□□□□□ -0.15
GPC1-209ENST00000495100 NCAPGQ9BPX3 1015 aa14.1□□□□□ -0.15
GPC1-209ENST00000495100 LAMA3Q16787 3333 aa14.1□□□□□ -0.15
GPC1-209ENST00000495100 CES2O00748 559 aa14.1□□□□□ -0.15
GPC1-209ENST00000495100 IRF6O14896 467 aa14.1□□□□□ -0.15
GPC1-209ENST00000495100 CPP00450 1065 aa14.1□□□□□ -0.15
GPC1-209ENST00000495100 MYCP01106 439 aaPredicted RBP14.1□□□□□ -0.15
GPC1-209ENST00000495100 NQO1P15559 274 aaKnown RBP14.1□□□□□ -0.15
GPC1-209ENST00000495100 AKAP5P24588 427 aa14.1□□□□□ -0.15
GPC1-209ENST00000495100 PTK7Q13308 1070 aa14.1□□□□□ -0.15
GPC1-209ENST00000495100 PTPN20Q4JDL3 420 aa14.1□□□□□ -0.15
GPC1-209ENST00000495100 ZC3H3Q8IXZ2 948 aaKnown RBP14.1□□□□□ -0.15
GPC1-209ENST00000495100 PAF1Q8N7H5 531 aa14.1□□□□□ -0.15
GPC1-209ENST00000495100 TLCD1Q96CP7 247 aa14.1□□□□□ -0.15
GPC1-209ENST00000495100 CPXM1Q96SM3 734 aa14.1□□□□□ -0.15
GPC1-209ENST00000495100 ADAM7Q9H2U9 754 aa14.1□□□□□ -0.15
GPC1-209ENST00000495100 UBP1Q9NZI7 540 aa14.1□□□□□ -0.15
GPC1-209ENST00000495100 A0A1B0GUA9 196 aa14.1□□□□□ -0.15
GPC1-209ENST00000495100 PHBP35232 272 aa14.1□□□□□ -0.15
GPC1-209ENST00000495100 SOX11P35716 441 aa14.1□□□□□ -0.15
GPC1-209ENST00000495100 PLCB4Q15147 1175 aa14.1□□□□□ -0.15
GPC1-209ENST00000495100 C16orf46Q6P387 395 aa14.1□□□□□ -0.15
GPC1-209ENST00000495100 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.1□□□□□ -0.153e-9■■■■■ 80.2
GPC1-209ENST00000495100 HEY2Q9UBP5 337 aa14.1□□□□□ -0.15
GPC1-209ENST00000495100 HESX1Q9UBX0 185 aa14.1□□□□□ -0.15
GPC1-209ENST00000495100 KIAA1551Q9HCM1 1747 aa14.09□□□□□ -0.15
GPC1-209ENST00000495100 TRIM49D1C9J1S8 452 aa14.09□□□□□ -0.15
GPC1-209ENST00000495100 CALB1P05937 261 aa14.09□□□□□ -0.15
GPC1-209ENST00000495100 MIPP30301 263 aa14.09□□□□□ -0.15
GPC1-209ENST00000495100 GBP1P32455 592 aa14.09□□□□□ -0.15
GPC1-209ENST00000495100 TFDP3Q5H9I0 405 aa14.09□□□□□ -0.15
GPC1-209ENST00000495100 FNBP1LQ5T0N5 605 aa14.09□□□□□ -0.15
GPC1-209ENST00000495100 CCDC62Q6P9F0 684 aa14.09□□□□□ -0.15
GPC1-209ENST00000495100 FAM131BQ86XD5 332 aa14.09□□□□□ -0.15
GPC1-209ENST00000495100 DDX1Q92499 740 aaKnown RBP14.09□□□□□ -0.15
GPC1-209ENST00000495100 USP6NLQ92738 828 aa14.09□□□□□ -0.15
GPC1-209ENST00000495100 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.09□□□□□ -0.15
GPC1-209ENST00000495100 TIMM13Q9Y5L4 95 aaPredicted RBP14.09□□□□□ -0.15
GPC1-209ENST00000495100 BTAF1O14981 1849 aa14.09□□□□□ -0.15
GPC1-209ENST00000495100 SCN7AQ01118 1682 aa14.09□□□□□ -0.15
GPC1-209ENST00000495100 COPEO14579 308 aa14.09□□□□□ -0.15
GPC1-209ENST00000495100 MAPK13O15264 365 aa14.09□□□□□ -0.15
GPC1-209ENST00000495100 NUDT17P0C025 328 aa14.09□□□□□ -0.15
GPC1-209ENST00000495100 ESRRAP11474 423 aaPredicted RBP14.09□□□□□ -0.15
GPC1-209ENST00000495100 NCF2P19878 526 aaPredicted RBP14.09□□□□□ -0.15
GPC1-209ENST00000495100 GCNT1Q02742 428 aa14.09□□□□□ -0.15
GPC1-209ENST00000495100 PSMD6Q15008 389 aa14.09□□□□□ -0.15
GPC1-209ENST00000495100 ARMC9Q7Z3E5 817 aa14.09□□□□□ -0.15
GPC1-209ENST00000495100 ARID3BQ8IVW6 561 aaPredicted RBP14.09□□□□□ -0.15
GPC1-209ENST00000495100 AGBL3Q8NEM8 1001 aa14.09□□□□□ -0.15
GPC1-209ENST00000495100 DCPSQ96C86 337 aaKnown RBP14.09□□□□□ -0.15
GPC1-209ENST00000495100 PIWIL1Q96J94 861 aaKnown RBP14.09□□□□□ -0.15
GPC1-209ENST00000495100 SERPINB12Q96P63 405 aa14.09□□□□□ -0.15
GPC1-209ENST00000495100 MED10Q9BTT4 135 aa14.09□□□□□ -0.15
GPC1-209ENST00000495100 VPS11Q9H270 941 aa14.09□□□□□ -0.15
GPC1-209ENST00000495100 LRRC19Q9H756 370 aa14.09□□□□□ -0.15
GPC1-209ENST00000495100 WHRNQ9P202 907 aa14.09□□□□□ -0.15
GPC1-209ENST00000495100 SPDYE16A6NNV3 312 aaPredicted RBP14.08□□□□□ -0.15
GPC1-209ENST00000495100 E5RJQ4 531 aa14.08□□□□□ -0.15
GPC1-209ENST00000495100 CYB561D2O14569 222 aa14.08□□□□□ -0.15
GPC1-209ENST00000495100 GYG2O15488 501 aa14.08□□□□□ -0.15
GPC1-209ENST00000495100 LDHAP00338 332 aaKnown RBP14.08□□□□□ -0.15
GPC1-209ENST00000495100 ATP4AP20648 1035 aa14.08□□□□□ -0.15
GPC1-209ENST00000495100 PAX7P23759 505 aa14.08□□□□□ -0.15
GPC1-209ENST00000495100 ACAT1P24752 427 aaKnown RBP14.08□□□□□ -0.15
GPC1-209ENST00000495100 IL1R2P27930 398 aa14.08□□□□□ -0.15
GPC1-209ENST00000495100 SLC1A1P43005 524 aa14.08□□□□□ -0.15
GPC1-209ENST00000495100 WDR4P57081 412 aaKnown RBP14.08□□□□□ -0.15
GPC1-209ENST00000495100 AP1B1Q10567 949 aa14.08□□□□□ -0.15
GPC1-209ENST00000495100 CCNG2Q16589 344 aa14.08□□□□□ -0.15
GPC1-209ENST00000495100 KBTBD12Q3ZCT8 623 aa14.08□□□□□ -0.15
GPC1-209ENST00000495100 MSS51Q4VC12 460 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms