RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 LHX1P48742 406 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 SNRPFP62306 86 aaKnown RBP11.36□□□□□ -0.59
NELFE-213ENST00000494956 CYP27A1Q02318 531 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 TNK2Q07912 1038 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 PSMD2Q13200 908 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 BIRC3Q13489 604 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 TRPC3Q13507 836 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 PNOCQ13519 176 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 NFE2Q16621 373 aaPredicted RBP11.36□□□□□ -0.59
NELFE-213ENST00000494956 MDH1BQ5I0G3 518 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 C1orf220Q5T0J3 134 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 CEP135Q66GS9 1140 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 FAM171BQ6P995 826 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 SCARA5Q6ZMJ2 495 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 ASCL5Q7RTU5 278 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 MFSD6LQ8IWD5 586 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 MAML2Q8IZL2 1156 aaPredicted RBP11.36□□□□□ -0.59
NELFE-213ENST00000494956 OR6B3Q8NGW1 331 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 PARD3BQ8TEW8 1205 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 SHDQ96IW2 340 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 SDCBP2Q9H190 292 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 XYLT2Q9H1B5 865 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 TASP1Q9H6P5 420 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 SMYD3Q9H7B4 428 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 TMEM30AQ9NV96 361 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 USP25Q9UHP3 1055 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 ATP6V1DQ9Y5K8 247 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 R4GN57 208 aa11.36□□□□□ -0.59
NELFE-213ENST00000494956 CLDN5O00501 218 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 DPYSL4O14531 572 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 GFRA3O60609 400 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 RHOBTB3O94955 611 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 CLSTN1O94985 981 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 CCNE1P24864 410 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 PCSK1P29120 753 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 CDC25CP30307 473 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 GNL1P36915 607 aaPredicted RBP11.35□□□□□ -0.59
NELFE-213ENST00000494956 NBL1P41271 181 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 CACNA2D1P54289 1103 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 USP46P62068 366 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 TNNC1P63316 161 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 SMARCB1Q12824 385 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 ORC1Q13415 861 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 BECN1Q14457 450 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 ARHGAP15Q53QZ3 475 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 WDR44Q5JSH3 913 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 SPOPLQ6IQ16 392 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 DPH6Q7L8W6 267 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 C1orf210Q8IVY1 113 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 YAF2Q8IY57 180 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 CMTM8Q8IZV2 173 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 TTC16Q8NEE8 873 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 DEPDC1BQ8WUY9 529 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 DNASE1L2Q92874 299 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 IRF7Q92985 503 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 EEF2KMTQ96G04 330 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 PCED1BQ96HM7 432 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 SLC22A12Q96S37 553 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 CYP2S1Q96SQ9 504 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 GPR88Q9GZN0 384 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 SNX25Q9H3E2 840 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 GTSE1Q9NYZ3 720 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 CGNQ9P2M7 1197 aaKnown RBP11.35□□□□□ -0.59
NELFE-213ENST00000494956 CDH9Q9ULB4 789 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 CIZ1Q9ULV3 898 aaPredicted RBP11.35□□□□□ -0.59
NELFE-213ENST00000494956 PIAS3Q9Y6X2 628 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 FANCMQ8IYD8 2048 aa11.35□□□□□ -0.59
NELFE-213ENST00000494956 ATG2BQ96BY7 2078 aa11.34□□□□□ -0.59
NELFE-213ENST00000494956 MYH10P35580 1976 aa11.34□□□□□ -0.59
NELFE-213ENST00000494956 C2orf78A6NCI8 922 aa11.34□□□□□ -0.59
NELFE-213ENST00000494956 PDXKO00764 312 aa11.34□□□□□ -0.59
NELFE-213ENST00000494956 SP9P0CG40 484 aa11.34□□□□□ -0.59
NELFE-213ENST00000494956 TRIM49P0CI25 452 aa11.34□□□□□ -0.59
NELFE-213ENST00000494956 TRIM49CP0CI26 452 aa11.34□□□□□ -0.59
NELFE-213ENST00000494956 CSH1P0DML2 217 aa11.34□□□□□ -0.59
NELFE-213ENST00000494956 CSH2P0DML3 217 aa11.34□□□□□ -0.59
NELFE-213ENST00000494956 HOXC13P31276 330 aa11.34□□□□□ -0.59
NELFE-213ENST00000494956 GRIK1P39086 918 aa11.34□□□□□ -0.59
NELFE-213ENST00000494956 RPL10AP62906 217 aaKnown RBP11.34□□□□□ -0.59
NELFE-213ENST00000494956 FCHO2Q0JRZ9 810 aa11.34□□□□□ -0.59
NELFE-213ENST00000494956 CFAP221Q4G0U5 840 aa11.34□□□□□ -0.59
NELFE-213ENST00000494956 TRIM68Q6AZZ1 485 aa11.34□□□□□ -0.59
NELFE-213ENST00000494956 TXNDC11Q6PKC3 985 aa11.34□□□□□ -0.59
NELFE-213ENST00000494956 TSSK4Q6SA08 328 aa11.34□□□□□ -0.59
NELFE-213ENST00000494956 ZNF852Q6ZMS4 543 aa11.34□□□□□ -0.59
NELFE-213ENST00000494956 SLC9A9Q8IVB4 645 aa11.34□□□□□ -0.59
NELFE-213ENST00000494956 FMR1NBQ8N0W7 255 aaPredicted RBP11.34□□□□□ -0.59
NELFE-213ENST00000494956 ZNF687Q8N1G0 1237 aa11.34□□□□□ -0.59
NELFE-213ENST00000494956 SPATA18Q8TC71 538 aa11.34□□□□□ -0.59
NELFE-213ENST00000494956 FAM3CQ92520 227 aa11.34□□□□□ -0.59
NELFE-213ENST00000494956 USP13Q92995 863 aaPredicted RBP11.34□□□□□ -0.59
NELFE-213ENST00000494956 GCNAQ96QF7 691 aa11.34□□□□□ -0.59
NELFE-213ENST00000494956 BCO2Q9BYV7 579 aa11.34□□□□□ -0.59
NELFE-213ENST00000494956 ZNF518BQ9C0D4 1074 aa11.34□□□□□ -0.59
NELFE-213ENST00000494956 MMRN2Q9H8L6 949 aa11.34□□□□□ -0.59
NELFE-213ENST00000494956 TRPC7Q9HCX4 862 aa11.34□□□□□ -0.59
NELFE-213ENST00000494956 ABCB6Q9NP58 842 aa11.34□□□□□ -0.59
NELFE-213ENST00000494956 RBM12Q9NTZ6 932 aaKnown RBP11.34□□□□□ -0.59
NELFE-213ENST00000494956 SPATA6Q9NWH7 488 aaPredicted RBP11.34□□□□□ -0.59
NELFE-213ENST00000494956 MAGEC2Q9UBF1 373 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms