RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 FAM126BQ8IXS8 530 aa12.14□□□□□ -0.47
HDLBP-245ENST00000494862 C12orf29Q8N999 325 aa12.14□□□□□ -0.47
HDLBP-245ENST00000494862 RNF169Q8NCN4 708 aa12.14□□□□□ -0.47
HDLBP-245ENST00000494862 IPO4Q8TEX9 1081 aaKnown RBP12.14□□□□□ -0.47
HDLBP-245ENST00000494862 STK32AQ8WU08 396 aa12.14□□□□□ -0.47
HDLBP-245ENST00000494862 HNRNPLLQ8WVV9 542 aaKnown RBP12.14□□□□□ -0.47
HDLBP-245ENST00000494862 MCRS1Q96EZ8 462 aa12.14□□□□□ -0.47
HDLBP-245ENST00000494862 DDX27Q96GQ7 796 aaKnown RBP12.14□□□□□ -0.47
HDLBP-245ENST00000494862 DEFB118Q96PH6 123 aa12.14□□□□□ -0.47
HDLBP-245ENST00000494862 CPXM1Q96SM3 734 aa12.14□□□□□ -0.47
HDLBP-245ENST00000494862 KRT12Q99456 494 aa12.14□□□□□ -0.47
HDLBP-245ENST00000494862 LRRC1Q9BTT6 524 aa12.14□□□□□ -0.47
HDLBP-245ENST00000494862 MFRPQ9BY79 579 aa12.14□□□□□ -0.47
HDLBP-245ENST00000494862 SYNCQ9H7C4 482 aa12.14□□□□□ -0.47
HDLBP-245ENST00000494862 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.14□□□□□ -0.47
HDLBP-245ENST00000494862 TRIP11Q15643 1979 aa12.14□□□□□ -0.47
HDLBP-245ENST00000494862 SCN1AP35498 2009 aa12.13□□□□□ -0.47
HDLBP-245ENST00000494862 C9IYK1 514 aa12.13□□□□□ -0.47
HDLBP-245ENST00000494862 GOLGA8SH3BPF8 625 aa12.13□□□□□ -0.47
HDLBP-245ENST00000494862 ERLIN1O75477 346 aa12.13□□□□□ -0.47
HDLBP-245ENST00000494862 EOMESO95936 686 aa12.13□□□□□ -0.47
HDLBP-245ENST00000494862 PFKMP08237 780 aa12.13□□□□□ -0.47
HDLBP-245ENST00000494862 PDGFRBP09619 1106 aa12.13□□□□□ -0.47
HDLBP-245ENST00000494862 PYGMP11217 842 aa12.13□□□□□ -0.47
HDLBP-245ENST00000494862 KRT3P12035 628 aa12.13□□□□□ -0.47
HDLBP-245ENST00000494862 CCL5P13501 91 aa12.13□□□□□ -0.47
HDLBP-245ENST00000494862 AARSP49588 968 aaKnown RBP eCLIP12.13□□□□□ -0.47
HDLBP-245ENST00000494862 SNX16P57768 344 aa12.13□□□□□ -0.47
HDLBP-245ENST00000494862 RPL7AP62424 266 aaKnown RBP12.13□□□□□ -0.47
HDLBP-245ENST00000494862 VSNL1P62760 191 aa12.13□□□□□ -0.47
HDLBP-245ENST00000494862 PIGHQ14442 188 aaPredicted RBP12.13□□□□□ -0.47
HDLBP-245ENST00000494862 MTFR1Q15390 333 aa12.13□□□□□ -0.47
HDLBP-245ENST00000494862 RTN4RL1Q86UN2 441 aaPredicted RBP12.13□□□□□ -0.47
HDLBP-245ENST00000494862 TTC30AQ86WT1 665 aa12.13□□□□□ -0.47
HDLBP-245ENST00000494862 RHOT1Q8IXI2 618 aa12.13□□□□□ -0.47
HDLBP-245ENST00000494862 TMEM86AQ8N2M4 240 aa12.13□□□□□ -0.47
HDLBP-245ENST00000494862 NIPA2Q8N8Q9 360 aa12.13□□□□□ -0.47
HDLBP-245ENST00000494862 FNIP1Q8TF40 1166 aa12.13□□□□□ -0.47
HDLBP-245ENST00000494862 TNIP3Q96KP6 325 aa12.13□□□□□ -0.47
HDLBP-245ENST00000494862 SENP8Q96LD8 212 aa12.13□□□□□ -0.47
HDLBP-245ENST00000494862 UROC1Q96N76 676 aa12.13□□□□□ -0.47
HDLBP-245ENST00000494862 MCEEQ96PE7 176 aa12.13□□□□□ -0.47
HDLBP-245ENST00000494862 PLVAPQ9BX97 442 aa12.13□□□□□ -0.47
HDLBP-245ENST00000494862 FTHL17Q9BXU8 183 aa12.13□□□□□ -0.47
HDLBP-245ENST00000494862 SLC4A5Q9BY07 1137 aa12.13□□□□□ -0.47
HDLBP-245ENST00000494862 DPEP3Q9H4B8 488 aa12.13□□□□□ -0.47
HDLBP-245ENST00000494862 WBP1LQ9NX94 342 aa12.13□□□□□ -0.47
HDLBP-245ENST00000494862 HESX1Q9UBX0 185 aa12.13□□□□□ -0.47
HDLBP-245ENST00000494862 FRMPD3Q5JV73 1810 aa12.12□□□□□ -0.47
HDLBP-245ENST00000494862 GOLGA6L10A0A0M3HER8 536 aa12.12□□□□□ -0.47
HDLBP-245ENST00000494862 GABRDO14764 452 aa12.12□□□□□ -0.47
HDLBP-245ENST00000494862 COL6A1P12109 1028 aa12.12□□□□□ -0.47
HDLBP-245ENST00000494862 LMO2P25791 158 aa12.12□□□□□ -0.47
HDLBP-245ENST00000494862 LHX1P48742 406 aa12.12□□□□□ -0.47
HDLBP-245ENST00000494862 CLCNKBP51801 687 aa12.12□□□□□ -0.47
HDLBP-245ENST00000494862 BCAT1P54687 386 aa12.12□□□□□ -0.47
HDLBP-245ENST00000494862 TAS2R40P59535 323 aa12.12□□□□□ -0.47
HDLBP-245ENST00000494862 OGDHQ02218 1023 aa12.12□□□□□ -0.47
HDLBP-245ENST00000494862 ZNF252P-AS1Q0IIN9 211 aa12.12□□□□□ -0.47
HDLBP-245ENST00000494862 UPP1Q16831 310 aa12.12□□□□□ -0.47
HDLBP-245ENST00000494862 LRRC38Q5VT99 294 aa12.12□□□□□ -0.47
HDLBP-245ENST00000494862 WSCD1Q658N2 575 aa12.12□□□□□ -0.47
HDLBP-245ENST00000494862 CC2D1AQ6P1N0 951 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-245ENST00000494862 DSTYKQ6XUX3 929 aa12.12□□□□□ -0.47
HDLBP-245ENST00000494862 SLC24A5Q71RS6 500 aa12.12□□□□□ -0.47
HDLBP-245ENST00000494862 SLC13A5Q86YT5 568 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-245ENST00000494862 KLHL7Q8IXQ5 586 aa12.12□□□□□ -0.47
HDLBP-245ENST00000494862 KATNAL2Q8IYT4 538 aa12.12□□□□□ -0.47
HDLBP-245ENST00000494862 ANKRD52Q8NB46 1076 aa12.12□□□□□ -0.47
HDLBP-245ENST00000494862 SPATA18Q8TC71 538 aa12.12□□□□□ -0.47
HDLBP-245ENST00000494862 SLC35F5Q8WV83 523 aa12.12□□□□□ -0.47
HDLBP-245ENST00000494862 LINC01599Q8WXQ3 324 aa12.12□□□□□ -0.47
HDLBP-245ENST00000494862 AP1M1Q9BXS5 423 aa12.12□□□□□ -0.47
HDLBP-245ENST00000494862 RNF208Q9H0X6 261 aa12.12□□□□□ -0.47
HDLBP-245ENST00000494862 SLITRK6Q9H5Y7 841 aa12.12□□□□□ -0.47
HDLBP-245ENST00000494862 ARFGAP3Q9NP61 516 aa12.12□□□□□ -0.47
HDLBP-245ENST00000494862 CYLDQ9NQC7 956 aa12.12□□□□□ -0.47
HDLBP-245ENST00000494862 FAM49BQ9NUQ9 324 aa12.12□□□□□ -0.47
HDLBP-245ENST00000494862 TJP2Q9UDY2 1190 aa12.12□□□□□ -0.47
HDLBP-245ENST00000494862 METRNQ9UJH8 293 aa12.12□□□□□ -0.47
HDLBP-245ENST00000494862 USTQ9Y2C2 406 aa12.12□□□□□ -0.47
HDLBP-245ENST00000494862 CASTOR2A6NHX0 329 aa12.11□□□□□ -0.47
HDLBP-245ENST00000494862 ATP8B1O43520 1251 aa12.11□□□□□ -0.47
HDLBP-245ENST00000494862 HCRTO43612 131 aa12.11□□□□□ -0.47
HDLBP-245ENST00000494862 ZRANB2O95218 330 aaKnown RBP eCLIP12.11□□□□□ -0.47
HDLBP-245ENST00000494862 POMCP01189 267 aa12.11□□□□□ -0.47
HDLBP-245ENST00000494862 CCDC130P13994 396 aa12.11□□□□□ -0.47
HDLBP-245ENST00000494862 PTPN1P18031 435 aaKnown RBP12.11□□□□□ -0.47
HDLBP-245ENST00000494862 IBSPP21815 317 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-245ENST00000494862 PSMA2P25787 234 aa12.11□□□□□ -0.47
HDLBP-245ENST00000494862 TNFRSF8P28908 595 aa12.11□□□□□ -0.47
HDLBP-245ENST00000494862 RFC1P35251 1148 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-245ENST00000494862 RPL34P49207 117 aaKnown RBP12.11□□□□□ -0.47
HDLBP-245ENST00000494862 PDE4CQ08493 712 aa12.11□□□□□ -0.47
HDLBP-245ENST00000494862 BST2Q10589 180 aaKnown RBP12.11□□□□□ -0.47
HDLBP-245ENST00000494862 TUSC3Q13454 348 aa12.11□□□□□ -0.47
HDLBP-245ENST00000494862 OR6B2Q6IFH4 312 aa12.11□□□□□ -0.47
HDLBP-245ENST00000494862 GLB1LQ6UWU2 654 aa12.11□□□□□ -0.47
HDLBP-245ENST00000494862 CCNI2Q6ZMN8 369 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-245ENST00000494862 TMEM110Q86TL2 294 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms