RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 FBXO47Q5MNV8 452 aa19.56■□□□□ 0.72
TSPAN4-212ENST00000494815 C3orf20Q8ND61 904 aa19.56■□□□□ 0.72
TSPAN4-212ENST00000494815 HEXIM2Q96MH2 286 aaKnown RBP19.56■□□□□ 0.72
TSPAN4-212ENST00000494815 SLITRK6Q9H5Y7 841 aa19.56■□□□□ 0.72
TSPAN4-212ENST00000494815 GGA2Q9UJY4 613 aa19.56■□□□□ 0.72
TSPAN4-212ENST00000494815 SCN1AP35498 2009 aa19.56■□□□□ 0.72
TSPAN4-212ENST00000494815 GOLGA6L10A0A0M3HER8 536 aa19.56■□□□□ 0.72
TSPAN4-212ENST00000494815 NFX1Q12986 1120 aaKnown RBP19.56■□□□□ 0.72
TSPAN4-212ENST00000494815 PTK7Q13308 1070 aa19.56■□□□□ 0.72
TSPAN4-212ENST00000494815 ZNF211Q13398 564 aaPredicted RBP19.56■□□□□ 0.72
TSPAN4-212ENST00000494815 ORC1Q13415 861 aa19.56■□□□□ 0.72
TSPAN4-212ENST00000494815 ITGA7Q13683 1181 aa19.56■□□□□ 0.72
TSPAN4-212ENST00000494815 ARHGEF6Q15052 776 aa19.56■□□□□ 0.72
TSPAN4-212ENST00000494815 DNAJC24Q6P3W2 148 aa19.56■□□□□ 0.72
TSPAN4-212ENST00000494815 NLRP14Q86W24 1093 aa19.56■□□□□ 0.72
TSPAN4-212ENST00000494815 EIF1ADQ8N9N8 165 aaKnown RBP19.56■□□□□ 0.72
TSPAN4-212ENST00000494815 CABS1Q96KC9 395 aa19.56■□□□□ 0.72
TSPAN4-212ENST00000494815 FAM105AQ9NUU6 356 aa19.56■□□□□ 0.72
TSPAN4-212ENST00000494815 IP6K2Q9UHH9 426 aa19.56■□□□□ 0.72
TSPAN4-212ENST00000494815 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.56■□□□□ 0.72
TSPAN4-212ENST00000494815 TMEM191CA6NGB0 347 aa19.55■□□□□ 0.72
TSPAN4-212ENST00000494815 H0YHG0 523 aa19.55■□□□□ 0.72
TSPAN4-212ENST00000494815 MICAL2O94851 1124 aa19.55■□□□□ 0.72
TSPAN4-212ENST00000494815 THPOP40225 353 aa19.55■□□□□ 0.72
TSPAN4-212ENST00000494815 ACLYP53396 1101 aa19.55■□□□□ 0.72
TSPAN4-212ENST00000494815 GSCP56915 257 aaPredicted RBP19.55■□□□□ 0.72
TSPAN4-212ENST00000494815 UNC93AQ86WB7 457 aa19.55■□□□□ 0.72
TSPAN4-212ENST00000494815 CPNE8Q86YQ8 564 aa19.55■□□□□ 0.72
TSPAN4-212ENST00000494815 KLHL7Q8IXQ5 586 aa19.55■□□□□ 0.72
TSPAN4-212ENST00000494815 ARRDC4Q8NCT1 418 aa19.55■□□□□ 0.72
TSPAN4-212ENST00000494815 MYCBPAPQ8TBZ2 947 aa19.55■□□□□ 0.72
TSPAN4-212ENST00000494815 GDAP2Q9NXN4 497 aa19.55■□□□□ 0.72
TSPAN4-212ENST00000494815 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.55■□□□□ 0.72
TSPAN4-212ENST00000494815 MOXD2PA6NHM9 499 aa19.54■□□□□ 0.72
TSPAN4-212ENST00000494815 SART1O43290 800 aaKnown RBP19.54■□□□□ 0.72
TSPAN4-212ENST00000494815 RAD51CO43502 376 aa19.54■□□□□ 0.72
TSPAN4-212ENST00000494815 VEGFBP49765 207 aa19.54■□□□□ 0.72
TSPAN4-212ENST00000494815 PTPN20Q4JDL3 420 aa19.54■□□□□ 0.72
TSPAN4-212ENST00000494815 PPP1R15BQ5SWA1 713 aa19.54■□□□□ 0.72
TSPAN4-212ENST00000494815 LCLAT1Q6UWP7 414 aa19.54■□□□□ 0.72
TSPAN4-212ENST00000494815 LRIG3Q6UXM1 1119 aa19.54■□□□□ 0.72
TSPAN4-212ENST00000494815 CCT8L2Q96SF2 557 aa19.54■□□□□ 0.72
TSPAN4-212ENST00000494815 WDR35Q9P2L0 1181 aa19.54■□□□□ 0.72
TSPAN4-212ENST00000494815 PLAAQ9Y263 795 aa19.54■□□□□ 0.72
TSPAN4-212ENST00000494815 HTTP42858 3142 aa19.54■□□□□ 0.72
TSPAN4-212ENST00000494815 PSTPIP1O43586 416 aa19.54■□□□□ 0.72
TSPAN4-212ENST00000494815 ITGA4P13612 1032 aa19.54■□□□□ 0.72
TSPAN4-212ENST00000494815 SLAIN1Q8ND83 568 aa19.54■□□□□ 0.72
TSPAN4-212ENST00000494815 MRPL45Q9BRJ2 306 aaKnown RBP19.54■□□□□ 0.72
TSPAN4-212ENST00000494815 TSEN34Q9BSV6 310 aaKnown RBP19.54■□□□□ 0.72
TSPAN4-212ENST00000494815 TMBIM4Q9HC24 238 aa19.54■□□□□ 0.72
TSPAN4-212ENST00000494815 M0QYV0 167 aa19.53■□□□□ 0.72
TSPAN4-212ENST00000494815 FAM107AO95990 144 aa19.53■□□□□ 0.72
TSPAN4-212ENST00000494815 PYGMP11217 842 aa19.53■□□□□ 0.72
TSPAN4-212ENST00000494815 LRPAP1P30533 357 aa19.53■□□□□ 0.72
TSPAN4-212ENST00000494815 TAF6P49848 677 aa19.53■□□□□ 0.72
TSPAN4-212ENST00000494815 PRMT2P55345 433 aa19.53■□□□□ 0.72
TSPAN4-212ENST00000494815 SV2CQ496J9 727 aa19.53■□□□□ 0.72
TSPAN4-212ENST00000494815 MAATS1Q7Z4T9 603 aa19.53■□□□□ 0.72
TSPAN4-212ENST00000494815 ARFGAP2Q8N6H7 521 aa19.53■□□□□ 0.72
TSPAN4-212ENST00000494815 GPATCH11Q8N954 259 aa19.53■□□□□ 0.72
TSPAN4-212ENST00000494815 C18orf8Q96DM3 657 aa19.53■□□□□ 0.72
TSPAN4-212ENST00000494815 PPP1R10Q96QC0 940 aaKnown RBP19.53■□□□□ 0.72
TSPAN4-212ENST00000494815 TRAIPQ9BWF2 469 aa19.53■□□□□ 0.72
TSPAN4-212ENST00000494815 DDX47Q9H0S4 455 aaKnown RBP19.53■□□□□ 0.72
TSPAN4-212ENST00000494815 ERVK-5Q9HDB9 667 aa19.53■□□□□ 0.72
TSPAN4-212ENST00000494815 SLC38A7Q9NVC3 462 aa19.53■□□□□ 0.72
TSPAN4-212ENST00000494815 CYTH4Q9UIA0 394 aa19.53■□□□□ 0.72
TSPAN4-212ENST00000494815 NOD1Q9Y239 953 aa19.53■□□□□ 0.72
TSPAN4-212ENST00000494815 KPNA7A9QM74 516 aa19.53■□□□□ 0.72
TSPAN4-212ENST00000494815 PTGESO14684 152 aa19.53■□□□□ 0.72
TSPAN4-212ENST00000494815 CAND2O75155 1236 aa19.53■□□□□ 0.72
TSPAN4-212ENST00000494815 GPD2P43304 727 aa19.53■□□□□ 0.72
TSPAN4-212ENST00000494815 RPL7AP62424 266 aaKnown RBP19.53■□□□□ 0.72
TSPAN4-212ENST00000494815 SOX4Q06945 474 aaPredicted RBP19.53■□□□□ 0.72
TSPAN4-212ENST00000494815 SOWAHAQ2M3V2 549 aa19.53■□□□□ 0.72
TSPAN4-212ENST00000494815 FAM26DQ5JW98 314 aa19.53■□□□□ 0.72
TSPAN4-212ENST00000494815 CEP85LQ5SZL2 805 aa19.53■□□□□ 0.72
TSPAN4-212ENST00000494815 DCUN1D2Q6PH85 259 aa19.53■□□□□ 0.72
TSPAN4-212ENST00000494815 RHOT1Q8IXI2 618 aa19.53■□□□□ 0.72
TSPAN4-212ENST00000494815 CCDC26Q8TAB7 109 aa19.53■□□□□ 0.72
TSPAN4-212ENST00000494815 GLT1D1Q96MS3 346 aa19.53■□□□□ 0.72
TSPAN4-212ENST00000494815 AGO3Q9H9G7 860 aaKnown RBP19.53■□□□□ 0.72
TSPAN4-212ENST00000494815 GOLGA6L10A6NI86 522 aa19.52■□□□□ 0.72
TSPAN4-212ENST00000494815 FKTNO75072 461 aa19.52■□□□□ 0.72
TSPAN4-212ENST00000494815 INHAP05111 366 aa19.52■□□□□ 0.72
TSPAN4-212ENST00000494815 GABRB2P47870 512 aa19.52■□□□□ 0.72
TSPAN4-212ENST00000494815 RAB27AP51159 221 aa19.52■□□□□ 0.72
TSPAN4-212ENST00000494815 TRADDQ15628 312 aa19.52■□□□□ 0.72
TSPAN4-212ENST00000494815 LIMS2Q7Z4I7 341 aa19.52■□□□□ 0.72
TSPAN4-212ENST00000494815 MCEEQ96PE7 176 aa19.52■□□□□ 0.72
TSPAN4-212ENST00000494815 CPXM1Q96SM3 734 aa19.52■□□□□ 0.72
TSPAN4-212ENST00000494815 DNAI2Q9GZS0 605 aa19.52■□□□□ 0.72
TSPAN4-212ENST00000494815 RNF19AQ9NV58 838 aa19.52■□□□□ 0.72
TSPAN4-212ENST00000494815 SEC24CP53992 1094 aa19.51■□□□□ 0.71
TSPAN4-212ENST00000494815 CUL1Q13616 776 aa19.51■□□□□ 0.71
TSPAN4-212ENST00000494815 ZNF268Q14587 947 aaPredicted RBP19.51■□□□□ 0.71
TSPAN4-212ENST00000494815 TRIM71Q2Q1W2 868 aaKnown RBP19.51■□□□□ 0.71
TSPAN4-212ENST00000494815 CYP4A22Q5TCH4 519 aa19.51■□□□□ 0.71
TSPAN4-212ENST00000494815 AADACL2Q6P093 401 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms