RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 SDHAF4Q5VUM1 108 aa16.99■□□□□ 0.31
LIME1-209ENST00000494776 MTSS1LQ765P7 747 aa16.99■□□□□ 0.31
LIME1-209ENST00000494776 UBALD2Q8IYN6 164 aa16.99■□□□□ 0.31
LIME1-209ENST00000494776 RSAD2Q8WXG1 361 aa16.99■□□□□ 0.31
LIME1-209ENST00000494776 SEMA4DQ92854 862 aa16.99■□□□□ 0.31
LIME1-209ENST00000494776 SLC35C1Q96A29 364 aa16.99■□□□□ 0.31
LIME1-209ENST00000494776 PCED1BQ96HM7 432 aa16.99■□□□□ 0.31
LIME1-209ENST00000494776 GCNAQ96QF7 691 aa16.99■□□□□ 0.31
LIME1-209ENST00000494776 DNAI2Q9GZS0 605 aa16.99■□□□□ 0.31
LIME1-209ENST00000494776 NIF3L1Q9GZT8 377 aa16.99■□□□□ 0.31
LIME1-209ENST00000494776 ATXN3LQ9H3M9 355 aa16.99■□□□□ 0.31
LIME1-209ENST00000494776 CYP3A43Q9HB55 503 aa16.99■□□□□ 0.31
LIME1-209ENST00000494776 APOBEC3GQ9HC16 384 aaKnown RBP16.99■□□□□ 0.31
LIME1-209ENST00000494776 MAGED2Q9UNF1 606 aaPredicted RBP16.99■□□□□ 0.31
LIME1-209ENST00000494776 HCN4Q9Y3Q4 1203 aa16.99■□□□□ 0.31
LIME1-209ENST00000494776 NME7Q9Y5B8 376 aa16.99■□□□□ 0.31
LIME1-209ENST00000494776 A0A1W2PRU2 124 aa16.98■□□□□ 0.31
LIME1-209ENST00000494776 GPR37L1O60883 481 aa16.98■□□□□ 0.31
LIME1-209ENST00000494776 MBD3O95983 291 aa16.98■□□□□ 0.31
LIME1-209ENST00000494776 CSH1P0DML2 217 aa16.98■□□□□ 0.31
LIME1-209ENST00000494776 CSH2P0DML3 217 aa16.98■□□□□ 0.31
LIME1-209ENST00000494776 GABRR2P28476 465 aa16.98■□□□□ 0.31
LIME1-209ENST00000494776 MAGEA11P43364 429 aa16.98■□□□□ 0.31
LIME1-209ENST00000494776 CETN1Q12798 172 aa16.98■□□□□ 0.31
LIME1-209ENST00000494776 TEAD2Q15562 447 aa16.98■□□□□ 0.31
LIME1-209ENST00000494776 ARHGAP15Q53QZ3 475 aa16.98■□□□□ 0.31
LIME1-209ENST00000494776 PARM1Q6UWI2 310 aa16.98■□□□□ 0.31
LIME1-209ENST00000494776 TMC8Q8IU68 726 aa16.98■□□□□ 0.31
LIME1-209ENST00000494776 MED10Q9BTT4 135 aa16.98■□□□□ 0.31
LIME1-209ENST00000494776 BCO2Q9BYV7 579 aa16.98■□□□□ 0.31
LIME1-209ENST00000494776 NUMBLQ9Y6R0 609 aa16.98■□□□□ 0.31
LIME1-209ENST00000494776 ATP8B3O60423 1300 aa16.97■□□□□ 0.31
LIME1-209ENST00000494776 ANHXE9PGG2 379 aa16.97■□□□□ 0.31
LIME1-209ENST00000494776 TRIM66O15016 1216 aa16.97■□□□□ 0.31
LIME1-209ENST00000494776 LRRN2O75325 713 aa16.97■□□□□ 0.31
LIME1-209ENST00000494776 CD58P19256 250 aa16.97■□□□□ 0.31
LIME1-209ENST00000494776 CDC25CP30307 473 aa16.97■□□□□ 0.31
LIME1-209ENST00000494776 FMO5P49326 533 aa16.97■□□□□ 0.31
LIME1-209ENST00000494776 NDST1P52848 882 aa16.97■□□□□ 0.31
LIME1-209ENST00000494776 SIGLEC14Q08ET2 396 aa16.97■□□□□ 0.31
LIME1-209ENST00000494776 ORC1Q13415 861 aa16.97■□□□□ 0.31
LIME1-209ENST00000494776 HTR4Q13639 388 aa16.97■□□□□ 0.31
LIME1-209ENST00000494776 DPCR1Q3MIW9 517 aa16.97■□□□□ 0.31
LIME1-209ENST00000494776 VSTM1Q6UX27 236 aa16.97■□□□□ 0.31
LIME1-209ENST00000494776 TRIM67Q6ZTA4 783 aa16.97■□□□□ 0.31
LIME1-209ENST00000494776 ACOT1Q86TX2 421 aa16.97■□□□□ 0.31
LIME1-209ENST00000494776 UNC93AQ86WB7 457 aa16.97■□□□□ 0.31
LIME1-209ENST00000494776 SLC44A3Q8N4M1 653 aa16.97■□□□□ 0.31
LIME1-209ENST00000494776 STKLD1Q8NE28 680 aa16.97■□□□□ 0.31
LIME1-209ENST00000494776 SHKBP1Q8TBC3 707 aa16.97■□□□□ 0.31
LIME1-209ENST00000494776 FGF14Q92915 247 aa16.97■□□□□ 0.31
LIME1-209ENST00000494776 LRFN3Q9BTN0 628 aa16.97■□□□□ 0.31
LIME1-209ENST00000494776 LRRC3Q9BY71 257 aa16.97■□□□□ 0.31
LIME1-209ENST00000494776 GPR88Q9GZN0 384 aa16.97■□□□□ 0.31
LIME1-209ENST00000494776 SMOC2Q9H3U7 446 aa16.97■□□□□ 0.31
LIME1-209ENST00000494776 ZNF334Q9HCZ1 680 aaPredicted RBP16.97■□□□□ 0.31
LIME1-209ENST00000494776 UXTQ9UBK9 157 aaPredicted RBP16.97■□□□□ 0.31
LIME1-209ENST00000494776 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.97■□□□□ 0.31
LIME1-209ENST00000494776 DOCK6Q96HP0 2047 aa16.97■□□□□ 0.31
LIME1-209ENST00000494776 SLC38A8A6NNN8 435 aa16.96■□□□□ 0.31
LIME1-209ENST00000494776 KXD1Q9BQD3 176 aa16.96■□□□□ 0.31
LIME1-209ENST00000494776 NT5C1AQ9BXI3 368 aa16.96■□□□□ 0.31
LIME1-209ENST00000494776 B3GNT5Q9BYG0 378 aa16.96■□□□□ 0.31
LIME1-209ENST00000494776 ELOVL4Q9GZR5 314 aa16.96■□□□□ 0.31
LIME1-209ENST00000494776 COQ4Q9Y3A0 265 aa16.96■□□□□ 0.31
LIME1-209ENST00000494776 TMEM221A6NGB7 291 aa16.95■□□□□ 0.3
LIME1-209ENST00000494776 M0R296 226 aa16.95■□□□□ 0.3
LIME1-209ENST00000494776 CLDN5O00501 218 aa16.95■□□□□ 0.3
LIME1-209ENST00000494776 MOSPD3O75425 235 aa16.95■□□□□ 0.3
LIME1-209ENST00000494776 KCNH2Q12809 1159 aa16.95■□□□□ 0.3
LIME1-209ENST00000494776 LRMPQ12912 555 aa16.95■□□□□ 0.3
LIME1-209ENST00000494776 GPR158Q5T848 1215 aa16.95■□□□□ 0.3
LIME1-209ENST00000494776 SASS6Q6UVJ0 657 aa16.95■□□□□ 0.3
LIME1-209ENST00000494776 GAREM2Q75VX8 874 aa16.95■□□□□ 0.3
LIME1-209ENST00000494776 TRIM59Q8IWR1 403 aa16.95■□□□□ 0.3
LIME1-209ENST00000494776 TTC39CQ8N584 583 aa16.95■□□□□ 0.3
LIME1-209ENST00000494776 ZSCAN18Q8TBC5 510 aaPredicted RBP16.95■□□□□ 0.3
LIME1-209ENST00000494776 TATDN2Q93075 761 aa16.95■□□□□ 0.3
LIME1-209ENST00000494776 FAXDC2Q96IV6 333 aa16.95■□□□□ 0.3
LIME1-209ENST00000494776 CNOT6LQ96LI5 555 aaKnown RBP16.95■□□□□ 0.3
LIME1-209ENST00000494776 ZSWIM3Q96MP5 696 aa16.95■□□□□ 0.3
LIME1-209ENST00000494776 ZNF518BQ9C0D4 1074 aa16.95■□□□□ 0.3
LIME1-209ENST00000494776 ZFP14Q9HCL3 533 aa16.95■□□□□ 0.3
LIME1-209ENST00000494776 HMGXB4Q9UGU5 601 aa16.95■□□□□ 0.3
LIME1-209ENST00000494776 FBXL21Q9UKT6 434 aa16.95■□□□□ 0.3
LIME1-209ENST00000494776 DUSP12Q9UNI6 340 aa16.95■□□□□ 0.3
LIME1-209ENST00000494776 NOTCH4Q99466 2003 aa16.94■□□□□ 0.3
LIME1-209ENST00000494776 PRR33A8MZF0 331 aa16.94■□□□□ 0.3
LIME1-209ENST00000494776 F8VP50 259 aa16.94■□□□□ 0.3
LIME1-209ENST00000494776 NRG2O14511 850 aaPredicted RBP16.94■□□□□ 0.3
LIME1-209ENST00000494776 NARSO43776 548 aaKnown RBP16.94■□□□□ 0.3
LIME1-209ENST00000494776 AFPP02771 609 aaKnown RBP16.94■□□□□ 0.3
LIME1-209ENST00000494776 HMGA1P17096 107 aaKnown RBP16.94■□□□□ 0.3
LIME1-209ENST00000494776 ERCC5P28715 1186 aaPredicted RBP16.94■□□□□ 0.3
LIME1-209ENST00000494776 MARSP56192 900 aaKnown RBP16.94■□□□□ 0.3
LIME1-209ENST00000494776 CYP4F8P98187 520 aa16.94■□□□□ 0.3
LIME1-209ENST00000494776 INCA1Q0VD86 236 aa16.94■□□□□ 0.3
LIME1-209ENST00000494776 ZNF394Q53GI3 561 aa16.94■□□□□ 0.3
LIME1-209ENST00000494776 FAM78AQ5JUQ0 283 aa16.94■□□□□ 0.3
LIME1-209ENST00000494776 CCDC183Q5T5S1 534 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms