RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 SELENOOQ9BVL4 669 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 PARD6BQ9BYG5 372 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 TRIM7Q9C029 511 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 RSAD1Q9HA92 442 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 FAM53CQ9NYF3 392 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 TSPAN16Q9UKR8 245 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 PACSIN2Q9UNF0 486 aaPredicted RBP7.19□□□□□ -1.26
MSH5-217ENST00000494458 PCNTO95613 3336 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 DNAH12Q6ZR08 3092 aa7.19□□□□□ -1.26
MSH5-217ENST00000494458 CCDC151A5D8V7 595 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 CCDC188H7C350 402 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 TULP1O00294 542 aaPredicted RBP7.18□□□□□ -1.26
MSH5-217ENST00000494458 PODXLO00592 558 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 CYB561D2O14569 222 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 KCNK3O14649 394 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 ATP8B1O43520 1251 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 PSTPIP1O43586 416 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 ZRANB2O95218 330 aaKnown RBP eCLIP7.18□□□□□ -1.26
MSH5-217ENST00000494458 TYMPP19971 482 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 TNFRSF8P28908 595 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 CXCR5P32302 372 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 PTPN7P35236 360 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 MLH1P40692 756 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 PAFAH1B1P43034 410 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 LHX1P48742 406 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 SCNN1GP51170 649 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 CLCNKBP51801 687 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 RPL7AP62424 266 aaKnown RBP7.18□□□□□ -1.26
MSH5-217ENST00000494458 PLCB3Q01970 1234 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 OGDHQ02218 1023 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 FAAP100Q0VG06 881 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 PIGHQ14442 188 aaPredicted RBP7.18□□□□□ -1.26
MSH5-217ENST00000494458 MESDQ14696 234 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 BRD3Q15059 726 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 SIX1Q15475 284 aaPredicted RBP7.18□□□□□ -1.26
MSH5-217ENST00000494458 PKN2Q16513 984 aaKnown RBP7.18□□□□□ -1.26
MSH5-217ENST00000494458 PPP2R5EQ16537 467 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 ARSIQ5FYB1 569 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 CLLU1OSQ5K130 101 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 KIAA0319Q5VV43 1072 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 PMF1Q6P1K2 205 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 LLGL2Q6P1M3 1020 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 DCLRE1AQ6PJP8 1040 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 LRRC8DQ7L1W4 858 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 BNIPLQ7Z465 357 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 POLNQ7Z5Q5 900 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 ZDHHC17Q8IUH5 632 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 PASD1Q8IV76 773 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 KATNAL2Q8IYT4 538 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 SCML4Q8N228 414 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 C12orf29Q8N999 325 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 KCTD13Q8WZ19 329 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 KRT35Q92764 455 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 APBB2Q92870 758 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 LPPQ93052 612 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 TNIP3Q96KP6 325 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 SUSD3Q96L08 255 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 SENP8Q96LD8 212 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 HSFY1Q96LI6 401 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 DEFB118Q96PH6 123 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 PNKPQ96T60 521 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 RTP3Q9BQQ7 232 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 C11orf70Q9BRQ4 267 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 C11orf84Q9BUA3 381 aaPredicted RBP7.18□□□□□ -1.26
MSH5-217ENST00000494458 BEGAINQ9BUH8 593 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 APOL6Q9BWW8 343 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 MIS12Q9H081 205 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 GOLGA2P5Q9HBQ8 144 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 TMEM161AQ9NX61 479 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 KANSL3Q9P2N6 904 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 CHORDC1Q9UHD1 332 aaPredicted RBP7.18□□□□□ -1.26
MSH5-217ENST00000494458 IP6K2Q9UHH9 426 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 PUF60Q9UHX1 559 aaKnown RBP7.18□□□□□ -1.26
MSH5-217ENST00000494458 ANAPC7Q9UJX3 599 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 NOD1Q9Y239 953 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 EFR3BQ9Y2G0 817 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 CEP83Q9Y592 693 aa7.18□□□□□ -1.26
MSH5-217ENST00000494458 COL4A4P53420 1690 aaPredicted RBP7.18□□□□□ -1.26
MSH5-217ENST00000494458 C2CD4BA6NLJ0 364 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 A8MXQ7 604 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 PGRMC1O00264 195 aaKnown RBP7.17□□□□□ -1.26
MSH5-217ENST00000494458 DPYSL4O14531 572 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 HUS1O60921 280 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 ENDOD1O94919 500 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 CLSTN1O94985 981 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 OAZ2O95190 189 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 ERBB2P04626 1255 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 PYGMP11217 842 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 CD19P15391 556 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 PTPN1P18031 435 aaKnown RBP7.17□□□□□ -1.26
MSH5-217ENST00000494458 RFC1P35251 1148 aaPredicted RBP7.17□□□□□ -1.26
MSH5-217ENST00000494458 PLA2G4AP47712 749 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 GJA8P48165 433 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 RWDD2BP57060 319 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 KLF1Q13351 362 aaPredicted RBP7.17□□□□□ -1.26
MSH5-217ENST00000494458 MRPL58Q14197 206 aaKnown RBP7.17□□□□□ -1.26
MSH5-217ENST00000494458 TCTN1Q2MV58 587 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 TIGD5Q53EQ6 642 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 C2CD6Q53TS8 623 aa7.17□□□□□ -1.26
MSH5-217ENST00000494458 RAB41Q5JT25 222 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms