RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 WDR6Q9NNW5 1121 aaKnown RBP13.28□□□□□ -0.28
TRA2A-209ENST00000494255 PRKAG3Q9UGI9 489 aa13.28□□□□□ -0.28
TRA2A-209ENST00000494255 HMGXB4Q9UGU5 601 aa13.28□□□□□ -0.28
TRA2A-209ENST00000494255 ASB3Q9Y575 518 aa13.28□□□□□ -0.28
TRA2A-209ENST00000494255 CLUHO75153 1309 aa13.27□□□□□ -0.28
TRA2A-209ENST00000494255 TCF20Q9UGU0 1960 aaKnown RBP13.27□□□□□ -0.29
TRA2A-209ENST00000494255 ZNF18P17022 549 aa13.27□□□□□ -0.29
TRA2A-209ENST00000494255 SLC9A1P19634 815 aa13.27□□□□□ -0.29
TRA2A-209ENST00000494255 BDNFP23560 247 aa13.27□□□□□ -0.29
TRA2A-209ENST00000494255 COPB1P53618 953 aaKnown RBP13.27□□□□□ -0.29
TRA2A-209ENST00000494255 TAF12Q16514 161 aa13.27□□□□□ -0.29
TRA2A-209ENST00000494255 PABPC1LQ4VXU2 614 aaKnown RBP13.27□□□□□ -0.29
TRA2A-209ENST00000494255 ZNF394Q53GI3 561 aa13.27□□□□□ -0.29
TRA2A-209ENST00000494255 VSTM1Q6UX27 236 aa13.27□□□□□ -0.29
TRA2A-209ENST00000494255 ENOSF1Q7L5Y1 443 aa13.27□□□□□ -0.29
TRA2A-209ENST00000494255 ARHGEF19Q8IW93 802 aa13.27□□□□□ -0.29
TRA2A-209ENST00000494255 SCN4BQ8IWT1 228 aa13.27□□□□□ -0.29
TRA2A-209ENST00000494255 FEZF2Q8TBJ5 459 aa13.27□□□□□ -0.29
TRA2A-209ENST00000494255 LPIN3Q9BQK8 851 aa13.27□□□□□ -0.29
TRA2A-209ENST00000494255 B3GNT5Q9BYG0 378 aa13.27□□□□□ -0.29
TRA2A-209ENST00000494255 CBX8Q9HC52 389 aa13.27□□□□□ -0.29
TRA2A-209ENST00000494255 UBE2TQ9NPD8 197 aaPredicted RBP13.27□□□□□ -0.29
TRA2A-209ENST00000494255 LIMA1Q9UHB6 759 aaKnown RBP13.27□□□□□ -0.29
TRA2A-209ENST00000494255 NR2E1Q9Y466 385 aa13.27□□□□□ -0.29
TRA2A-209ENST00000494255 COL6A3P12111 3177 aa13.26□□□□□ -0.29
TRA2A-209ENST00000494255 GOLGA6L19H0YKK7 550 aa13.26□□□□□ -0.29
TRA2A-209ENST00000494255 TRIM66O15016 1216 aa13.26□□□□□ -0.29
TRA2A-209ENST00000494255 PON1P27169 355 aa13.26□□□□□ -0.29
TRA2A-209ENST00000494255 ANXA13P27216 316 aa13.26□□□□□ -0.29
TRA2A-209ENST00000494255 GRIK1P39086 918 aa13.26□□□□□ -0.29
TRA2A-209ENST00000494255 MFAP3P55082 362 aa13.26□□□□□ -0.29
TRA2A-209ENST00000494255 IQCB1Q15051 598 aa13.26□□□□□ -0.29
TRA2A-209ENST00000494255 CYP4A22Q5TCH4 519 aa13.26□□□□□ -0.29
TRA2A-209ENST00000494255 RRAGAQ7L523 313 aa13.26□□□□□ -0.29
TRA2A-209ENST00000494255 ADHFE1Q8IWW8 467 aa13.26□□□□□ -0.29
TRA2A-209ENST00000494255 WHAMMQ8TF30 809 aa13.26□□□□□ -0.29
TRA2A-209ENST00000494255 TMEM176AQ96HP8 235 aa13.26□□□□□ -0.29
TRA2A-209ENST00000494255 HEXIM2Q96MH2 286 aaKnown RBP13.26□□□□□ -0.29
TRA2A-209ENST00000494255 TWNKQ96RR1 684 aa13.26□□□□□ -0.29
TRA2A-209ENST00000494255 TSPY26PQ9H489 355 aa13.26□□□□□ -0.29
TRA2A-209ENST00000494255 ASAH2Q9NR71 780 aa13.26□□□□□ -0.29
TRA2A-209ENST00000494255 FAM49BQ9NUQ9 324 aa13.26□□□□□ -0.29
TRA2A-209ENST00000494255 HCFC1R1Q9NWW0 138 aa13.26□□□□□ -0.29
TRA2A-209ENST00000494255 CEP72Q9P209 647 aa13.26□□□□□ -0.29
TRA2A-209ENST00000494255 DNMT3BQ9UBC3 853 aaKnown RBP13.26□□□□□ -0.29
TRA2A-209ENST00000494255 APEX2Q9UBZ4 518 aa13.26□□□□□ -0.29
TRA2A-209ENST00000494255 PCDHB4Q9Y5E5 795 aa13.26□□□□□ -0.29
TRA2A-209ENST00000494255 PTPRDP23468 1912 aa13.25□□□□□ -0.29
TRA2A-209ENST00000494255 CLDN5O00501 218 aa13.25□□□□□ -0.29
TRA2A-209ENST00000494255 ZNF197O14709 1029 aa13.25□□□□□ -0.29
TRA2A-209ENST00000494255 RHOP08100 348 aa13.25□□□□□ -0.29
TRA2A-209ENST00000494255 CCDC130P13994 396 aa13.25□□□□□ -0.29
TRA2A-209ENST00000494255 ATF6P18850 670 aa13.25□□□□□ -0.29
TRA2A-209ENST00000494255 FSHRP23945 695 aa13.25□□□□□ -0.29
TRA2A-209ENST00000494255 NTHL1P78549 312 aa13.25□□□□□ -0.29
TRA2A-209ENST00000494255 DDR2Q16832 855 aa13.25□□□□□ -0.29
TRA2A-209ENST00000494255 PHLDB3Q6NSJ2 640 aa13.25□□□□□ -0.29
TRA2A-209ENST00000494255 TMEM270Q6UE05 265 aa13.25□□□□□ -0.29
TRA2A-209ENST00000494255 LRSAM1Q6UWE0 723 aa13.25□□□□□ -0.29
TRA2A-209ENST00000494255 PDZD4Q76G19 769 aaPredicted RBP13.25□□□□□ -0.29
TRA2A-209ENST00000494255 OTOP3Q7RTS5 596 aa13.25□□□□□ -0.29
TRA2A-209ENST00000494255 FAM35AQ86V20 835 aa13.25□□□□□ -0.29
TRA2A-209ENST00000494255 LUZP1Q86V48 1076 aa13.25□□□□□ -0.29
TRA2A-209ENST00000494255 LEMD2Q8NC56 503 aa13.25□□□□□ -0.29
TRA2A-209ENST00000494255 ADAMTS19Q8TE59 1207 aa13.25□□□□□ -0.29
TRA2A-209ENST00000494255 GIPC2Q8TF65 315 aa13.25□□□□□ -0.29
TRA2A-209ENST00000494255 PSMG2Q969U7 264 aa13.25□□□□□ -0.29
TRA2A-209ENST00000494255 JAKMIP2Q96AA8 810 aa13.25□□□□□ -0.29
TRA2A-209ENST00000494255 SMARCD1Q96GM5 515 aa13.25□□□□□ -0.29
TRA2A-209ENST00000494255 RPGRIP1Q96KN7 1286 aa13.25□□□□□ -0.29
TRA2A-209ENST00000494255 ZNF518BQ9C0D4 1074 aa13.25□□□□□ -0.29
TRA2A-209ENST00000494255 HSD3B7Q9H2F3 369 aa13.25□□□□□ -0.29
TRA2A-209ENST00000494255 EYSQ5T1H1 3165 aa13.25□□□□□ -0.29
TRA2A-209ENST00000494255 DENND4AQ7Z401 1863 aa13.25□□□□□ -0.29
TRA2A-209ENST00000494255 LRRC10BA6NIK2 292 aa13.24□□□□□ -0.29
TRA2A-209ENST00000494255 LGALS16A8MUM7 142 aa13.24□□□□□ -0.29
TRA2A-209ENST00000494255 FGF19O95750 216 aa13.24□□□□□ -0.29
TRA2A-209ENST00000494255 CSH1P0DML2 217 aa13.24□□□□□ -0.29
TRA2A-209ENST00000494255 CSH2P0DML3 217 aa13.24□□□□□ -0.29
TRA2A-209ENST00000494255 MYL4P12829 197 aa13.24□□□□□ -0.29
TRA2A-209ENST00000494255 ATP1A3P13637 1013 aa13.24□□□□□ -0.29
TRA2A-209ENST00000494255 KRT5P13647 590 aa13.24□□□□□ -0.29
TRA2A-209ENST00000494255 SP100P23497 879 aaPredicted RBP13.24□□□□□ -0.29
TRA2A-209ENST00000494255 GBP2P32456 591 aaPredicted RBP13.24□□□□□ -0.29
TRA2A-209ENST00000494255 GPR15P49685 360 aa13.24□□□□□ -0.29
TRA2A-209ENST00000494255 RAD23BP54727 409 aa13.24□□□□□ -0.29
TRA2A-209ENST00000494255 SDHAF4Q5VUM1 108 aa13.24□□□□□ -0.29
TRA2A-209ENST00000494255 GET4Q7L5D6 327 aaPredicted RBP13.24□□□□□ -0.29
TRA2A-209ENST00000494255 DNAJB7Q7Z6W7 309 aaPredicted RBP13.24□□□□□ -0.29
TRA2A-209ENST00000494255 UBR7Q8N806 425 aa13.24□□□□□ -0.29
TRA2A-209ENST00000494255 C12orf29Q8N999 325 aa13.24□□□□□ -0.29
TRA2A-209ENST00000494255 TDRD5Q8NAT2 981 aaKnown RBP13.24□□□□□ -0.29
TRA2A-209ENST00000494255 SLC4A11Q8NBS3 891 aa13.24□□□□□ -0.29
TRA2A-209ENST00000494255 SLC2A14Q8TDB8 520 aa13.24□□□□□ -0.29
TRA2A-209ENST00000494255 KAT5Q92993 513 aa13.24□□□□□ -0.29
TRA2A-209ENST00000494255 ACSF2Q96CM8 615 aaPredicted RBP13.24□□□□□ -0.29
TRA2A-209ENST00000494255 CYFIP2Q96F07 1278 aa13.24□□□□□ -0.29
TRA2A-209ENST00000494255 CEP295NLQ96MC4 621 aa13.24□□□□□ -0.29
TRA2A-209ENST00000494255 HNRNPABQ99729 332 aaKnown RBP13.24□□□□□ -0.29
TRA2A-209ENST00000494255 AVENQ9NQS1 362 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms