RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 C1orf131Q8NDD1 294 aaKnown RBP19.93■□□□□ 0.78
COL27A1-207ENST00000494090 FAM49BQ9NUQ9 324 aa19.93■□□□□ 0.78
COL27A1-207ENST00000494090 CDYLQ9Y232 598 aa19.93■□□□□ 0.78
COL27A1-207ENST00000494090 ODC1P11926 461 aa19.93■□□□□ 0.78
COL27A1-207ENST00000494090 RARGP13631 454 aa19.93■□□□□ 0.78
COL27A1-207ENST00000494090 NLRP11P59045 1033 aaKnown RBP19.93■□□□□ 0.78
COL27A1-207ENST00000494090 ATP6V0D2Q8N8Y2 350 aa19.93■□□□□ 0.78
COL27A1-207ENST00000494090 UBA3Q8TBC4 463 aa19.93■□□□□ 0.78
COL27A1-207ENST00000494090 TMA16Q96EY4 203 aaKnown RBP19.93■□□□□ 0.78
COL27A1-207ENST00000494090 PACSIN1Q9BY11 444 aa19.93■□□□□ 0.78
COL27A1-207ENST00000494090 SYNDIG1LA6NDD5 238 aa19.93■□□□□ 0.78
COL27A1-207ENST00000494090 HMBSP08397 361 aa19.93■□□□□ 0.78
COL27A1-207ENST00000494090 FCGRTP55899 365 aa19.93■□□□□ 0.78
COL27A1-207ENST00000494090 RPS6P62753 249 aaKnown RBP19.93■□□□□ 0.78
COL27A1-207ENST00000494090 SPDYAQ5MJ70 313 aa19.93■□□□□ 0.78
COL27A1-207ENST00000494090 CHSY1Q86X52 802 aa19.93■□□□□ 0.78
COL27A1-207ENST00000494090 USP33Q8TEY7 942 aa19.93■□□□□ 0.78
COL27A1-207ENST00000494090 RIC8BQ9NVN3 520 aa19.93■□□□□ 0.78
COL27A1-207ENST00000494090 ITSN1Q15811 1721 aa19.93■□□□□ 0.78
COL27A1-207ENST00000494090 OR1G1P47890 313 aa19.93■□□□□ 0.78
COL27A1-207ENST00000494090 ZNF484Q5JVG2 852 aa19.93■□□□□ 0.78
COL27A1-207ENST00000494090 GNASQ5JWF2 1037 aa19.93■□□□□ 0.78
COL27A1-207ENST00000494090 CYP4A22Q5TCH4 519 aa19.93■□□□□ 0.78
COL27A1-207ENST00000494090 INTS5Q6P9B9 1019 aaKnown RBP19.93■□□□□ 0.78
COL27A1-207ENST00000494090 ANXA9O76027 345 aa19.92■□□□□ 0.78
COL27A1-207ENST00000494090 CTCFP49711 727 aaPredicted RBP19.92■□□□□ 0.78
COL27A1-207ENST00000494090 GTF2A2P52657 109 aa19.92■□□□□ 0.78
COL27A1-207ENST00000494090 PKD2L2Q9NZM6 624 aa19.92■□□□□ 0.78
COL27A1-207ENST00000494090 ARHGAP20Q9P2F6 1191 aa19.92■□□□□ 0.78
COL27A1-207ENST00000494090 DOLKQ9UPQ8 538 aa19.92■□□□□ 0.78
COL27A1-207ENST00000494090 PCDHB7Q9Y5E2 793 aa19.92■□□□□ 0.78
COL27A1-207ENST00000494090 HUNKP57058 714 aa19.92■□□□□ 0.78
COL27A1-207ENST00000494090 C17orf102A2RUQ5 167 aa19.92■□□□□ 0.78
COL27A1-207ENST00000494090 CYTH1Q15438 398 aa19.92■□□□□ 0.78
COL27A1-207ENST00000494090 NT5DC1Q5TFE4 455 aa19.92■□□□□ 0.78
COL27A1-207ENST00000494090 TDRD10Q5VZ19 366 aaKnown RBP19.92■□□□□ 0.78
COL27A1-207ENST00000494090 ATG4CQ96DT6 458 aa19.92■□□□□ 0.78
COL27A1-207ENST00000494090 H7C4K7 107 aa19.92■□□□□ 0.78
COL27A1-207ENST00000494090 RGS2P41220 211 aa19.92■□□□□ 0.78
COL27A1-207ENST00000494090 SFSWAPQ12872 951 aaKnown RBP19.92■□□□□ 0.78
COL27A1-207ENST00000494090 CHI3L2Q15782 390 aa19.92■□□□□ 0.78
COL27A1-207ENST00000494090 DCAF6Q58WW2 860 aa19.92■□□□□ 0.78
COL27A1-207ENST00000494090 BTNL9Q6UXG8 535 aa19.92■□□□□ 0.78
COL27A1-207ENST00000494090 ADCK2Q7Z695 626 aa19.92■□□□□ 0.78
COL27A1-207ENST00000494090 CAVIN3Q969G5 261 aa19.92■□□□□ 0.78
COL27A1-207ENST00000494090 DIP2BQ9P265 1576 aa19.91■□□□□ 0.78
COL27A1-207ENST00000494090 C16orf96A6NNT2 1141 aa19.91■□□□□ 0.78
COL27A1-207ENST00000494090 HOXA2O43364 376 aa19.91■□□□□ 0.78
COL27A1-207ENST00000494090 MAN1A2O60476 641 aa19.91■□□□□ 0.78
COL27A1-207ENST00000494090 CASP4P49662 377 aa19.91■□□□□ 0.78
COL27A1-207ENST00000494090 C6orf10Q5SRN2 563 aa19.91■□□□□ 0.78
COL27A1-207ENST00000494090 ZNF467Q7Z7K2 595 aaPredicted RBP19.91■□□□□ 0.78
COL27A1-207ENST00000494090 PRPF39Q86UA1 669 aaKnown RBP19.91■□□□□ 0.78
COL27A1-207ENST00000494090 ZNF555Q8NEP9 628 aa19.91■□□□□ 0.78
COL27A1-207ENST00000494090 SRP72O76094 671 aaKnown RBP19.91■□□□□ 0.78
COL27A1-207ENST00000494090 CYP11B1P15538 503 aa19.91■□□□□ 0.78
COL27A1-207ENST00000494090 HLA-DPA1P20036 260 aa19.91■□□□□ 0.78
COL27A1-207ENST00000494090 LRRC71Q8N4P6 559 aa19.91■□□□□ 0.78
COL27A1-207ENST00000494090 CERKQ8TCT0 537 aa19.91■□□□□ 0.78
COL27A1-207ENST00000494090 EPS8L3Q8TE67 593 aaKnown RBP19.91■□□□□ 0.78
COL27A1-207ENST00000494090 GFM2Q969S9 779 aaKnown RBP19.91■□□□□ 0.78
COL27A1-207ENST00000494090 TMEM39BQ9GZU3 492 aa19.91■□□□□ 0.78
COL27A1-207ENST00000494090 HNRNPH1P31943 449 aaKnown RBP19.91■□□□□ 0.78
COL27A1-207ENST00000494090 SARSP49591 514 aaKnown RBP19.91■□□□□ 0.78
COL27A1-207ENST00000494090 ERFP50548 548 aa19.91■□□□□ 0.78
COL27A1-207ENST00000494090 DNAJC3Q13217 504 aa19.91■□□□□ 0.78
COL27A1-207ENST00000494090 PGBD3Q8N328 593 aa19.91■□□□□ 0.78
COL27A1-207ENST00000494090 VPS37AQ8NEZ2 397 aa19.91■□□□□ 0.78
COL27A1-207ENST00000494090 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.91■□□□□ 0.783e-6■□□□□ 8.8
COL27A1-207ENST00000494090 CD274Q9NZQ7 290 aa19.91■□□□□ 0.78
COL27A1-207ENST00000494090 CLASP2O75122 1294 aaKnown RBP19.91■□□□□ 0.78
COL27A1-207ENST00000494090 NPTXRO95502 500 aa19.91■□□□□ 0.78
COL27A1-207ENST00000494090 FDFT1P37268 417 aa19.91■□□□□ 0.78
COL27A1-207ENST00000494090 SERPINB10P48595 397 aa19.91■□□□□ 0.78
COL27A1-207ENST00000494090 COBLL1Q53SF7 1204 aa19.91■□□□□ 0.78
COL27A1-207ENST00000494090 PPP4R4Q6NUP7 873 aa19.91■□□□□ 0.78
COL27A1-207ENST00000494090 MAGEB18Q96M61 343 aa19.91■□□□□ 0.78
COL27A1-207ENST00000494090 CCDC134Q9H6E4 229 aa19.91■□□□□ 0.78
COL27A1-207ENST00000494090 GIMAP4Q9NUV9 329 aa19.91■□□□□ 0.78
COL27A1-207ENST00000494090 TRIM49D1C9J1S8 452 aa19.9■□□□□ 0.78
COL27A1-207ENST00000494090 KCNA3P22001 575 aa19.9■□□□□ 0.78
COL27A1-207ENST00000494090 TWF1Q12792 350 aa19.9■□□□□ 0.78
COL27A1-207ENST00000494090 TMEM132BQ14DG7 1078 aa19.9■□□□□ 0.78
COL27A1-207ENST00000494090 FAM205AQ6ZU69 1335 aa19.9■□□□□ 0.78
COL27A1-207ENST00000494090 ATP8B4Q8TF62 1192 aa19.9■□□□□ 0.78
COL27A1-207ENST00000494090 GPR63Q9BZJ6 419 aa19.9■□□□□ 0.78
COL27A1-207ENST00000494090 ADGRB1O14514 1584 aa19.9■□□□□ 0.78
COL27A1-207ENST00000494090 TECPR2O15040 1411 aa19.9■□□□□ 0.78
COL27A1-207ENST00000494090 UGT3A1Q6NUS8 523 aa19.9■□□□□ 0.78
COL27A1-207ENST00000494090 ZNF571Q7Z3V5 609 aaPredicted RBP19.9■□□□□ 0.78
COL27A1-207ENST00000494090 CBWD2Q8IUF1 395 aa19.9■□□□□ 0.78
COL27A1-207ENST00000494090 EME1Q96AY2 570 aa19.9■□□□□ 0.78
COL27A1-207ENST00000494090 ANKZF1Q9H8Y5 726 aa19.9■□□□□ 0.78
COL27A1-207ENST00000494090 AIM2O14862 343 aa19.9■□□□□ 0.78
COL27A1-207ENST00000494090 UPP2O95045 317 aa19.9■□□□□ 0.78
COL27A1-207ENST00000494090 GARTP22102 1010 aa19.9■□□□□ 0.78
COL27A1-207ENST00000494090 EIF2B5Q13144 721 aaKnown RBP19.9■□□□□ 0.78
COL27A1-207ENST00000494090 KIZQ2M2Z5 673 aa19.9■□□□□ 0.78
COL27A1-207ENST00000494090 TMC2Q8TDI7 906 aa19.9■□□□□ 0.78
COL27A1-207ENST00000494090 SRPK1Q96SB4 655 aaKnown RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms