RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 NLRP12P59046 1061 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 MYL6P60660 151 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 MYL7Q01449 175 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 TNK2Q07912 1038 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 SMARCB1Q12824 385 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 SURF1Q15526 300 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 WDR44Q5JSH3 913 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 TXNDC8Q6A555 127 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 FAM171BQ6P995 826 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 TSSK4Q6SA08 328 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 HS2ST1Q7LGA3 356 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 C12orf56Q8IXR9 622 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 TMEM86AQ8N2M4 240 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 DEPDC1BQ8WUY9 529 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 FAM3CQ92520 227 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 DNASE1L2Q92874 299 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 IRF7Q92985 503 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 CLDN23Q96B33 292 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 FNBP1Q96RU3 617 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 MMS19Q96T76 1030 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 SYT15Q9BQS2 421 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 BCO2Q9BYV7 579 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 KCTD10Q9H3F6 313 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 GOLPH3LQ9H4A5 285 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 TASP1Q9H6P5 420 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 KIAA1586Q9HCI6 787 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 CRTAC1Q9NQ79 661 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 DMAC2Q9NW81 257 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 CCL26Q9Y258 94 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 PIAS3Q9Y6X2 628 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 COL4A2P08572 1712 aa9.14□□□□□ -0.95
LRCH3-219ENST00000494069 TICRRQ7Z2Z1 1910 aa9.14□□□□□ -0.95
LRCH3-219ENST00000494069 CHADO15335 359 aa9.14□□□□□ -0.95
LRCH3-219ENST00000494069 EXOC3O60645 756 aa9.14□□□□□ -0.95
LRCH3-219ENST00000494069 FGF19O95750 216 aa9.14□□□□□ -0.95
LRCH3-219ENST00000494069 RPN1P04843 607 aaKnown RBP9.14□□□□□ -0.95
LRCH3-219ENST00000494069 CDC25CP30307 473 aa9.14□□□□□ -0.95
LRCH3-219ENST00000494069 HOXC13P31276 330 aa9.14□□□□□ -0.95
LRCH3-219ENST00000494069 SYKP43405 635 aa9.14□□□□□ -0.95
LRCH3-219ENST00000494069 LHX1P48742 406 aa9.14□□□□□ -0.95
LRCH3-219ENST00000494069 DLG4P78352 724 aa9.14□□□□□ -0.95
LRCH3-219ENST00000494069 KRT85P78386 507 aa9.14□□□□□ -0.95
LRCH3-219ENST00000494069 CSTF1Q05048 431 aaKnown RBP9.14□□□□□ -0.95
LRCH3-219ENST00000494069 FCHO2Q0JRZ9 810 aa9.14□□□□□ -0.95
LRCH3-219ENST00000494069 MYO1EQ12965 1108 aa9.14□□□□□ -0.95
LRCH3-219ENST00000494069 TAF12Q16514 161 aa9.14□□□□□ -0.95
LRCH3-219ENST00000494069 NFE2Q16621 373 aaPredicted RBP9.14□□□□□ -0.95
LRCH3-219ENST00000494069 ARHGAP15Q53QZ3 475 aa9.14□□□□□ -0.95
LRCH3-219ENST00000494069 TDRD10Q5VZ19 366 aaKnown RBP9.14□□□□□ -0.95
LRCH3-219ENST00000494069 TXNDC11Q6PKC3 985 aa9.14□□□□□ -0.95
LRCH3-219ENST00000494069 DPH6Q7L8W6 267 aa9.14□□□□□ -0.95
LRCH3-219ENST00000494069 SPATA2LQ8IUW3 424 aaPredicted RBP9.14□□□□□ -0.95
LRCH3-219ENST00000494069 SCN4BQ8IWT1 228 aa9.14□□□□□ -0.95
LRCH3-219ENST00000494069 YAF2Q8IY57 180 aa9.14□□□□□ -0.95
LRCH3-219ENST00000494069 MAB21L3Q8N8X9 362 aa9.14□□□□□ -0.95
LRCH3-219ENST00000494069 NKD2Q969F2 451 aaPredicted RBP9.14□□□□□ -0.95
LRCH3-219ENST00000494069 MYLPFQ96A32 169 aa9.14□□□□□ -0.95
LRCH3-219ENST00000494069 HS3ST6Q96QI5 342 aa9.14□□□□□ -0.95
LRCH3-219ENST00000494069 OSBPL6Q9BZF3 934 aa9.14□□□□□ -0.95
LRCH3-219ENST00000494069 XYLT2Q9H1B5 865 aa9.14□□□□□ -0.95
LRCH3-219ENST00000494069 DPEP3Q9H4B8 488 aa9.14□□□□□ -0.95
LRCH3-219ENST00000494069 LMAN1LQ9HAT1 526 aa9.14□□□□□ -0.95
LRCH3-219ENST00000494069 TRPV5Q9NQA5 729 aa9.14□□□□□ -0.95
LRCH3-219ENST00000494069 RBM12Q9NTZ6 932 aaKnown RBP9.14□□□□□ -0.95
LRCH3-219ENST00000494069 EXOC1Q9NV70 894 aa9.14□□□□□ -0.95
LRCH3-219ENST00000494069 GTSE1Q9NYZ3 720 aa9.14□□□□□ -0.95
LRCH3-219ENST00000494069 NXF1Q9UBU9 619 aaKnown RBP9.14□□□□□ -0.95
LRCH3-219ENST00000494069 MAPK8IP1Q9UQF2 711 aa9.14□□□□□ -0.95
LRCH3-219ENST00000494069 R3HCC1Q9Y3T6 440 aaKnown RBP9.14□□□□□ -0.95
LRCH3-219ENST00000494069 PTPRZ1P23471 2315 aaPredicted RBP9.14□□□□□ -0.95
LRCH3-219ENST00000494069 MIA3Q5JRA6 1907 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 FAM237AA0A1B0GTK4 181 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 OTOL1A6NHN0 477 aaPredicted RBP9.13□□□□□ -0.95
LRCH3-219ENST00000494069 LRRIQ3A6PVS8 624 aaPredicted RBP9.13□□□□□ -0.95
LRCH3-219ENST00000494069 MAN2B1O00754 1011 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 DPYSL4O14531 572 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 LAMTOR5O43504 91 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 NOL4O94818 638 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 VNN1O95497 513 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 C4BPAP04003 597 aaKnown RBP9.13□□□□□ -0.95
LRCH3-219ENST00000494069 NR3C1P04150 777 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 CSH1P0DML2 217 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 CSH2P0DML3 217 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 CHRNB1P11230 501 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 WARSP23381 471 aaKnown RBP9.13□□□□□ -0.95
LRCH3-219ENST00000494069 BDNFP23560 247 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 PCSK1P29120 753 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 GNL1P36915 607 aaPredicted RBP9.13□□□□□ -0.95
LRCH3-219ENST00000494069 RAP1GAPP47736 663 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 KPNA1P52294 538 aaPredicted RBP9.13□□□□□ -0.95
LRCH3-219ENST00000494069 CACNA2D1P54289 1103 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 CDH8P55286 799 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 SNRPFP62306 86 aaKnown RBP9.13□□□□□ -0.95
LRCH3-219ENST00000494069 CYP27A1Q02318 531 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 DPYDQ12882 1025 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 MTAPQ13126 283 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 GAS6Q14393 721 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 WDR72Q3MJ13 1102 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 CFAP221Q4G0U5 840 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 MDH1BQ5I0G3 518 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms