RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 ARSEP51690 589 aa12.08□□□□□ -0.48
RFC4-214ENST00000494047 GEMIN4P57678 1058 aaKnown RBP12.08□□□□□ -0.48
RFC4-214ENST00000494047 NCALDP61601 193 aa12.08□□□□□ -0.48
RFC4-214ENST00000494047 TRPC3Q13507 836 aa12.08□□□□□ -0.48
RFC4-214ENST00000494047 SNX1Q13596 522 aa12.08□□□□□ -0.48
RFC4-214ENST00000494047 STILQ15468 1287 aa12.08□□□□□ -0.48
RFC4-214ENST00000494047 ZRSR2Q15696 482 aaKnown RBP12.08□□□□□ -0.48
RFC4-214ENST00000494047 DBN1Q16643 649 aa12.08□□□□□ -0.48
RFC4-214ENST00000494047 EFHC2Q5JST6 749 aa12.08□□□□□ -0.48
RFC4-214ENST00000494047 ZFYVE27Q5T4F4 411 aa12.08□□□□□ -0.48
RFC4-214ENST00000494047 CEP57Q86XR8 500 aa12.08□□□□□ -0.48
RFC4-214ENST00000494047 CCDC60Q8IWA6 550 aaPredicted RBP12.08□□□□□ -0.48
RFC4-214ENST00000494047 SRRM1Q8IYB3 904 aaKnown RBP12.08□□□□□ -0.48
RFC4-214ENST00000494047 REPS2Q8NFH8 660 aa12.08□□□□□ -0.48
RFC4-214ENST00000494047 ZNF606Q8WXB4 792 aa12.08□□□□□ -0.48
RFC4-214ENST00000494047 MAML1Q92585 1016 aa12.08□□□□□ -0.48
RFC4-214ENST00000494047 ANKRD36BP1Q96IX9 119 aa12.08□□□□□ -0.48
RFC4-214ENST00000494047 LRRC37BQ96QE4 947 aa12.08□□□□□ -0.48
RFC4-214ENST00000494047 LRMDAQ9H2I8 198 aa12.08□□□□□ -0.48
RFC4-214ENST00000494047 SAYSD1Q9NPB0 183 aa12.08□□□□□ -0.48
RFC4-214ENST00000494047 TOPORSQ9NS56 1045 aaPredicted RBP12.08□□□□□ -0.48
RFC4-214ENST00000494047 CYP39A1Q9NYL5 469 aa12.08□□□□□ -0.48
RFC4-214ENST00000494047 COL11A1P12107 1806 aaPredicted RBP12.08□□□□□ -0.48
RFC4-214ENST00000494047 RLFQ13129 1914 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 IQANK1A0A1B0GTG1 560 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 ZNF487B1APH4 448 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 TRAFD1O14545 582 aaPredicted RBP12.07□□□□□ -0.48
RFC4-214ENST00000494047 ABLIM1O14639 778 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 FAM155BO75949 473 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 UBOX5O94941 541 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 OSBPP22059 807 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 ATICP31939 592 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 STIP1P31948 543 aaKnown RBP12.07□□□□□ -0.48
RFC4-214ENST00000494047 GCLCP48506 637 aaPredicted RBP12.07□□□□□ -0.48
RFC4-214ENST00000494047 CCNG1P51959 295 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 TMED2Q15363 201 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 OASLQ15646 514 aaKnown RBP12.07□□□□□ -0.48
RFC4-214ENST00000494047 MTERF2Q49AM1 385 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 SLC45A4Q5BKX6 768 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 CMPK2Q5EBM0 449 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 FAM47CQ5HY64 1035 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 RNASEH2BQ5TBB1 312 aaKnown RBP12.07□□□□□ -0.48
RFC4-214ENST00000494047 LGSNQ5TDP6 509 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 HHATQ5VTY9 493 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 CDCA2Q69YH5 1023 aaPredicted RBP12.07□□□□□ -0.48
RFC4-214ENST00000494047 BBS12Q6ZW61 710 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 ASRGL1Q7L266 308 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 TAS1R3Q7RTX0 852 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 ERICH1Q86X53 443 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 PDIK1LQ8N165 341 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 ARHGAP24Q8N264 748 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 ANKRD42Q8N9B4 389 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 CD99L2Q8TCZ2 262 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 AFG1LQ8WV93 481 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 POP1Q99575 1024 aaKnown RBP12.07□□□□□ -0.48
RFC4-214ENST00000494047 KIFC3Q9BVG8 833 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 VPS11Q9H270 941 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 TRABDQ9H4I3 376 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 PRDM16Q9HAZ2 1276 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 IFT122Q9HBG6 1241 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 BAIAP2L1Q9UHR4 511 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 ZNF214Q9UL59 606 aaPredicted RBP12.07□□□□□ -0.48
RFC4-214ENST00000494047 KIAA1257Q9ULG3 409 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 IKBKGQ9Y6K9 419 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 A0A0G2JMZ2 1700 aa12.07□□□□□ -0.48
RFC4-214ENST00000494047 CCDC85CA6NKD9 419 aa12.06□□□□□ -0.48
RFC4-214ENST00000494047 SIGLEC16A6NMB1 481 aa12.06□□□□□ -0.48
RFC4-214ENST00000494047 E7ESA3 106 aa12.06□□□□□ -0.48
RFC4-214ENST00000494047 MCF2LO15068 1137 aa12.06□□□□□ -0.48
RFC4-214ENST00000494047 MAFO75444 373 aaPredicted RBP12.06□□□□□ -0.48
RFC4-214ENST00000494047 TGDSO95455 350 aa12.06□□□□□ -0.48
RFC4-214ENST00000494047 VNN1O95497 513 aa12.06□□□□□ -0.48
RFC4-214ENST00000494047 ATF7P17544 494 aaPredicted RBP12.06□□□□□ -0.48
RFC4-214ENST00000494047 TAC1P20366 129 aa12.06□□□□□ -0.48
RFC4-214ENST00000494047 GLRA2P23416 452 aa12.06□□□□□ -0.48
RFC4-214ENST00000494047 MSH2P43246 934 aa12.06□□□□□ -0.48
RFC4-214ENST00000494047 HMGCS2P54868 508 aa12.06□□□□□ -0.48
RFC4-214ENST00000494047 NLRP11P59045 1033 aaKnown RBP12.06□□□□□ -0.48
RFC4-214ENST00000494047 TNFAIP2Q03169 654 aa12.06□□□□□ -0.48
RFC4-214ENST00000494047 CDK18Q07002 472 aa12.06□□□□□ -0.48
RFC4-214ENST00000494047 GPS1Q13098 491 aa12.06□□□□□ -0.48
RFC4-214ENST00000494047 TFDP2Q14188 446 aa12.06□□□□□ -0.48
RFC4-214ENST00000494047 MAPK6Q16659 721 aa12.06□□□□□ -0.48
RFC4-214ENST00000494047 CCDC142Q17RM4 750 aa12.06□□□□□ -0.48
RFC4-214ENST00000494047 CCDC38Q502W7 563 aa12.06□□□□□ -0.48
RFC4-214ENST00000494047 NT5DC4Q86YG4 428 aa12.06□□□□□ -0.48
RFC4-214ENST00000494047 MAB21L3Q8N8X9 362 aa12.06□□□□□ -0.48
RFC4-214ENST00000494047 SLC35B2Q8TB61 432 aa12.06□□□□□ -0.48
RFC4-214ENST00000494047 RAB3IL1Q8TBN0 382 aa12.06□□□□□ -0.48
RFC4-214ENST00000494047 GTF3C2Q8WUA4 911 aaPredicted RBP12.06□□□□□ -0.48
RFC4-214ENST00000494047 RSAD2Q8WXG1 361 aa12.06□□□□□ -0.48
RFC4-214ENST00000494047 ATG4AQ8WYN0 398 aa12.06□□□□□ -0.48
RFC4-214ENST00000494047 ZNF516Q92618 1163 aa12.06□□□□□ -0.48
RFC4-214ENST00000494047 HAUS1Q96CS2 278 aa12.06□□□□□ -0.48
RFC4-214ENST00000494047 LRRC39Q96DD0 335 aa12.06□□□□□ -0.48
RFC4-214ENST00000494047 ATG4CQ96DT6 458 aa12.06□□□□□ -0.48
RFC4-214ENST00000494047 ACSS3Q9H6R3 686 aa12.06□□□□□ -0.48
RFC4-214ENST00000494047 RSAD1Q9HA92 442 aa12.06□□□□□ -0.48
RFC4-214ENST00000494047 CYP3A43Q9HB55 503 aa12.06□□□□□ -0.48
RFC4-214ENST00000494047 ABCF3Q9NUQ8 709 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms