RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 PLCB3Q01970 1234 aa12.08□□□□□ -0.48
MCF2L-231ENST00000494043 DSG1Q02413 1049 aa12.08□□□□□ -0.48
MCF2L-231ENST00000494043 KRT17Q04695 432 aa12.08□□□□□ -0.48
MCF2L-231ENST00000494043 MAPRE1Q15691 268 aaKnown RBP12.08□□□□□ -0.48
MCF2L-231ENST00000494043 PSMD5Q16401 504 aa12.08□□□□□ -0.48
MCF2L-231ENST00000494043 PKDCCQ504Y2 493 aa12.08□□□□□ -0.48
MCF2L-231ENST00000494043 FAM35AQ86V20 835 aa12.08□□□□□ -0.48
MCF2L-231ENST00000494043 TTC30AQ86WT1 665 aa12.08□□□□□ -0.48
MCF2L-231ENST00000494043 DNAAF5Q86Y56 855 aa12.08□□□□□ -0.48
MCF2L-231ENST00000494043 REXO1L1PQ8IX06 675 aa12.08□□□□□ -0.48
MCF2L-231ENST00000494043 DCP1BQ8IZD4 617 aaKnown RBP12.08□□□□□ -0.48
MCF2L-231ENST00000494043 FUKQ8N0W3 1084 aa12.08□□□□□ -0.48
MCF2L-231ENST00000494043 TXLNBQ8N3L3 684 aa12.08□□□□□ -0.48
MCF2L-231ENST00000494043 WDTC1Q8N5D0 677 aa12.08□□□□□ -0.48
MCF2L-231ENST00000494043 ANKRD52Q8NB46 1076 aa12.08□□□□□ -0.48
MCF2L-231ENST00000494043 CPA5Q8WXQ8 436 aa12.08□□□□□ -0.48
MCF2L-231ENST00000494043 RIN2Q8WYP3 895 aaPredicted RBP12.08□□□□□ -0.48
MCF2L-231ENST00000494043 MYLPFQ96A32 169 aa12.08□□□□□ -0.48
MCF2L-231ENST00000494043 PCED1BQ96HM7 432 aa12.08□□□□□ -0.48
MCF2L-231ENST00000494043 PPP1R13BQ96KQ4 1090 aa12.08□□□□□ -0.48
MCF2L-231ENST00000494043 PACSIN1Q9BY11 444 aa12.08□□□□□ -0.48
MCF2L-231ENST00000494043 MTRRQ9UBK8 725 aa12.08□□□□□ -0.48
MCF2L-231ENST00000494043 GTF3C4Q9UKN8 822 aa12.08□□□□□ -0.48
MCF2L-231ENST00000494043 INTUQ9ULD6 942 aa12.08□□□□□ -0.48
MCF2L-231ENST00000494043 PCDHA11Q9Y5I1 949 aa12.08□□□□□ -0.48
MCF2L-231ENST00000494043 A0A0U1RQJ8 604 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 FAM170AA1A519 330 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 RCCD1A6NED2 376 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 CLDN5O00501 218 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 PJA2O43164 708 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 ARHGEF15O94989 841 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 FTLP02792 175 aaPredicted RBP12.07□□□□□ -0.48
MCF2L-231ENST00000494043 URODP06132 367 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 CA3P07451 260 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 H2AFZP0C0S5 128 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 OR4Q2P0C623 313 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 SETSIPP0DME0 302 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 MSNP26038 577 aaKnown RBP12.07□□□□□ -0.48
MCF2L-231ENST00000494043 BMP8BP34820 402 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 GPD2P43304 727 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 RGS19P49795 217 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 GALCP54803 685 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 BST2Q10589 180 aaKnown RBP12.07□□□□□ -0.48
MCF2L-231ENST00000494043 SLC39A12Q504Y0 691 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 KIAA1841Q6NSI8 718 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 PRSS55Q6UWB4 352 aaPredicted RBP12.07□□□□□ -0.48
MCF2L-231ENST00000494043 RSPO2Q6UXX9 243 aaPredicted RBP12.07□□□□□ -0.48
MCF2L-231ENST00000494043 ZNF662Q6ZS27 426 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 PAQR9Q6ZVX9 377 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 H2AFVQ71UI9 128 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 MON1BQ7L1V2 547 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 LRRTM3Q86VH5 581 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 PHF13Q86YI8 300 aaPredicted RBP12.07□□□□□ -0.48
MCF2L-231ENST00000494043 GPR65Q8IYL9 337 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 VPS52Q8N1B4 723 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 KLHL23Q8NBE8 558 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 UBA3Q8TBC4 463 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 ATRIPQ8WXE1 791 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 SECISBP2LQ93073 1101 aaKnown RBP12.07□□□□□ -0.48
MCF2L-231ENST00000494043 TRIM11Q96F44 468 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 MED10Q9BTT4 135 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 PLVAPQ9BX97 442 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 TSGA10Q9BZW7 698 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 TMLHEQ9NVH6 421 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 TRMT1Q9NXH9 659 aaKnown RBP12.07□□□□□ -0.48
MCF2L-231ENST00000494043 CYTH4Q9UIA0 394 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 TFR2Q9UP52 801 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 BACE2Q9Y5Z0 518 aa12.07□□□□□ -0.48
MCF2L-231ENST00000494043 RANBP2P49792 3224 aaKnown RBP12.06□□□□□ -0.48
MCF2L-231ENST00000494043 ANKRD62A6NC57 917 aa12.06□□□□□ -0.48
MCF2L-231ENST00000494043 GOLGA6L9A6NEM1 432 aa12.06□□□□□ -0.48
MCF2L-231ENST00000494043 ESPNB1AK53 854 aa12.06□□□□□ -0.48
MCF2L-231ENST00000494043 C5orf67F2Z3F1 127 aa12.06□□□□□ -0.48
MCF2L-231ENST00000494043 CAPN15O75808 1086 aa12.06□□□□□ -0.48
MCF2L-231ENST00000494043 TMEM253P0C7T8 217 aa12.06□□□□□ -0.48
MCF2L-231ENST00000494043 FAM200BP0CF97 657 aa12.06□□□□□ -0.48
MCF2L-231ENST00000494043 NPR3P17342 541 aa12.06□□□□□ -0.48
MCF2L-231ENST00000494043 ABCB4P21439 1286 aa12.06□□□□□ -0.48
MCF2L-231ENST00000494043 MMP8P22894 467 aa12.06□□□□□ -0.48
MCF2L-231ENST00000494043 ARHGAP25P42331 645 aa12.06□□□□□ -0.48
MCF2L-231ENST00000494043 PDE4CQ08493 712 aa12.06□□□□□ -0.48
MCF2L-231ENST00000494043 KIF5AQ12840 1032 aa12.06□□□□□ -0.48
MCF2L-231ENST00000494043 PTP4A2Q12974 167 aa12.06□□□□□ -0.48
MCF2L-231ENST00000494043 PDCLQ13371 301 aa12.06□□□□□ -0.48
MCF2L-231ENST00000494043 NFE2Q16621 373 aaPredicted RBP12.06□□□□□ -0.48
MCF2L-231ENST00000494043 PTPN20Q4JDL3 420 aa12.06□□□□□ -0.48
MCF2L-231ENST00000494043 SLC8B1Q6J4K2 584 aa12.06□□□□□ -0.48
MCF2L-231ENST00000494043 C4orf50Q6ZRC1 276 aa12.06□□□□□ -0.48
MCF2L-231ENST00000494043 MMS22LQ6ZRQ5 1243 aa12.06□□□□□ -0.48
MCF2L-231ENST00000494043 SPATA2LQ8IUW3 424 aaPredicted RBP12.06□□□□□ -0.48
MCF2L-231ENST00000494043 MCOLN2Q8IZK6 566 aa12.06□□□□□ -0.48
MCF2L-231ENST00000494043 MSANTD4Q8NCY6 345 aa12.06□□□□□ -0.48
MCF2L-231ENST00000494043 SLC35F5Q8WV83 523 aa12.06□□□□□ -0.48
MCF2L-231ENST00000494043 CTNNBL1Q8WYA6 563 aaPredicted RBP12.06□□□□□ -0.48
MCF2L-231ENST00000494043 SMARCD1Q96GM5 515 aa12.06□□□□□ -0.48
MCF2L-231ENST00000494043 NOX5Q96PH1 765 aa12.06□□□□□ -0.48
MCF2L-231ENST00000494043 C17orf80Q9BSJ5 609 aa12.06□□□□□ -0.48
MCF2L-231ENST00000494043 DUSP16Q9BY84 665 aa12.06□□□□□ -0.48
MCF2L-231ENST00000494043 LACRTQ9GZZ8 138 aa12.06□□□□□ -0.48
MCF2L-231ENST00000494043 THAP2Q9H0W7 228 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms